Guide to the Human Genome
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Name: RBM26 Sequence: fasta or formatted (980aa) NCBI GI: 31652264
Description:

RNA binding motif protein 26

Referenced in:

RNA-binding Proteins
T cells

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         51           3
 C cysteine            0.7          7           1
 D aspartate           5.9         58           3
 E glutamate           8.4         82           4
 F phenylalanine       2.6         25           2
 G glycine             4.7         46           1
 H histidine           2.2         22           2
 I isoleucine          3.6         35           2
 K lysine              8.0         78           3
 L leucine             7.8         76           2
 M methionine          1.5         15           1
 N asparagine          3.9         38           2
 P proline             9.8         96           5
 Q glutamine           4.0         39           2
 R arginine            8.1         79           3
 S serine              8.8         86           3
 T threonine           6.0         59           2
 V valine              6.0         59           3
 W tryptophan          0.7          7           1
 Y tyrosine            2.2         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RNA binding motif protein 26 
RBM27                 0.380   RNA binding motif protein 27 
ENAH                  0.031   enabled homolog isoform a 
ENAH                  0.031   enabled homolog isoform b 
RBM25                 0.028   RNA binding motif protein 25 
SFRS15                0.028   splicing factor, arginine/serine-rich 15 isoform 2 ...
SFRS15                0.028   splicing factor, arginine/serine-rich 15 isoform 1 [...
SFRS15                0.028   splicing factor, arginine/serine-rich 15 isoform 3 ...
FMN2                  0.027   formin 2 
FMN1                  0.026   formin 1 
RAPH1                 0.025   Ras association and pleckstrin homology domains 1 is...
YLPM1                 0.025   YLP motif containing 1 
WBP11                 0.024   WW domain binding protein 11 
RSRC2                 0.024   arginine/serine-rich coiled-coil 2 isoform b 
RSRC2                 0.024   arginine/serine-rich coiled-coil 2 isoform a 
LOC100131202          0.024   PREDICTED: hypothetical protein 
LUC7L2                0.023   LUC7-like 2 
CROP                  0.023   cisplatin resistance-associated overexpressed protei...
CROP                  0.023   cisplatin resistance-associated overexpressed protei...
CRKRS                 0.022   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.022   Cdc2-related kinase, arginine/serine-rich isoform 1...
SETD1B                0.022   SET domain containing 1B 
WASL                  0.022   Wiskott-Aldrich syndrome gene-like protein 
DDX46                 0.022   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
CCNK                  0.022   cyclin K isoform 1 
PRR12                 0.022   proline rich 12 
CPSF6                 0.022   cleavage and polyadenylation specific factor 6, 68 ...
DIDO1                 0.022   death inducer-obliterator 1 isoform c 
SF3B4                 0.021   splicing factor 3b, subunit 4 
FLJ22184              0.021   PREDICTED: hypothetical protein FLJ22184 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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