LSM10 3950

Name: LSM10	Sequence: fasta or formatted (123aa)		NCBI GI: 14249632
Description: LSM10, U7 small nuclear RNA associated		Referenced in: Histones, Related Proteins, and Modifying Enzymes Capping and Splicing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.3 4 1 C cysteine 0.8 1 1 D aspartate 7.3 9 2 E glutamate 4.1 5 1 F phenylalanine 3.3 4 1 G glycine 7.3 9 2 H histidine 4.1 5 1 I isoleucine 8.1 10 2 K lysine 4.9 6 1 L leucine 7.3 9 2 M methionine 1.6 2 1 N asparagine 5.7 7 1 P proline 2.4 3 2 Q glutamine 5.7 7 2 R arginine 8.9 11 1 S serine 4.9 6 1 T threonine 6.5 8 2 V valine 10.6 13 1 W tryptophan 1.6 2 1 Y tyrosine 1.6 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LSM10, U7 small nuclear RNA associated SNRPD1 0.110 small nuclear ribonucleoprotein D1 polypeptide 16kDa ... LOC100129492 0.097 PREDICTED: similar to small nuclear ribonucleoprote... LSM2 0.088 LSM2 homolog, U6 small nuclear RNA associated LSM4 0.075 U6 snRNA-associated Sm-like protein 4 SNRPD3 0.066 small nuclear ribonucleoprotein polypeptide D3 PHKA1 0.013 phosphorylase kinase, alpha 1 (muscle) isoform 2 [H... PHKA1 0.013 phosphorylase kinase, alpha 1 (muscle) isoform 1 [H... SFRS4 0.013 splicing factor, arginine/serine-rich 4 ITGAV 0.013 integrin alpha-V isoform 3 precursor ITGAV 0.013 integrin alpha-V isoform 2 ITGAV 0.013 integrin alpha-V isoform 1 precursor SNRPF 0.009 small nuclear ribonucleoprotein polypeptide F GTPBP4 0.009 G protein-binding protein CRFG SFRS6 0.004 arginine/serine-rich splicing factor 6 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.