Guide to the Human Genome
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Name: BRWD3 Sequence: fasta or formatted (1802aa) NCBI GI: 153791630
Description:

bromodomain and WD repeat domain containing 3

Referenced in:

Bromodomain Family
WD Repeat Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         88           3
 C cysteine            1.7         31           2
 D aspartate           6.7        121           2
 E glutamate           6.7        120           2
 F phenylalanine       3.4         61           2
 G glycine             7.4        134           4
 H histidine           2.5         45           1
 I isoleucine          4.8         87           2
 K lysine              5.5        100           4
 L leucine             7.0        127           3
 M methionine          1.6         29           2
 N asparagine          4.2         76           2
 P proline             5.0         91           3
 Q glutamine           4.9         88           3
 R arginine            8.1        146           3
 S serine             10.0        180           5
 T threonine           5.2         93           2
 V valine              5.6        101           3
 W tryptophan          1.7         30           2
 Y tyrosine            3.0         54           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   bromodomain and WD repeat domain containing 3 [Homo... 
BRWD1                 0.508   bromodomain and WD repeat domain containing 1 isofor...
BRWD1                 0.508   bromodomain and WD repeat domain containing 1 isofor...
PHIP                  0.508   pleckstrin homology domain interacting protein [Homo...
BRWD1                 0.036   bromodomain and WD repeat domain containing 1 isofor...
WDR69                 0.026   WD repeat domain 69 
FBXW7                 0.022   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.022   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.022   F-box and WD repeat domain containing 7 isoform 2 [H...
WDR5B                 0.020   WD repeat domain 5B 
KATNB1                0.020   katanin p80 subunit B 1 
WDR5                  0.019   WD repeat domain 5 
WDR5                  0.019   WD repeat domain 5 
TAF5                  0.019   TBP-associated factor 5 
SNRNP40               0.019   WD repeat domain 57 (U5 snRNP specific) 
WDR38                 0.019   WD repeat domain 38 
TBL1Y                 0.017   transducin beta-like 1Y 
TBL1Y                 0.017   transducin beta-like 1Y 
TBL1Y                 0.017   transducin beta-like 1Y 
WDR51B                0.017   WD repeat domain 51B 
TBL1XR1               0.017   transducin (beta)-like 1 X-linked receptor 1 
FBXW11                0.017   F-box and WD repeat domain containing 11 isoform C [...
FBXW11                0.017   F-box and WD repeat domain containing 11 isoform A [...
FBXW11                0.017   F-box and WD repeat domain containing 11 isoform B [...
BTRC                  0.016   beta-transducin repeat containing protein isoform 2 [...
BTRC                  0.016   beta-transducin repeat containing protein isoform 1 ...
APAF1                 0.016   apoptotic peptidase activating factor 1 isoform d [H...
APAF1                 0.016   apoptotic peptidase activating factor 1 isoform b [Ho...
WDR51A                0.016   WD repeat domain 51A isoform 2 
WDR51A                0.016   WD repeat domain 51A isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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