SNRPD3 30830

Name: SNRPD3	Sequence: fasta or formatted (126aa)		NCBI GI: 4759160
Description: small nuclear ribonucleoprotein polypeptide D3		Referenced in: Capping and Splicing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.9 10 2 C cysteine 1.6 2 1 D aspartate 2.4 3 1 E glutamate 5.6 7 1 F phenylalanine 1.6 2 1 G glycine 11.9 15 1 H histidine 1.6 2 1 I isoleucine 7.9 10 1 K lysine 7.9 10 1 L leucine 6.3 8 1 M methionine 5.6 7 1 N asparagine 6.3 8 1 P proline 2.4 3 1 Q glutamine 4.8 6 1 R arginine 9.5 12 2 S serine 4.0 5 1 T threonine 4.0 5 1 V valine 6.3 8 1 W tryptophan 0.0 0 0 Y tyrosine 2.4 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 small nuclear ribonucleoprotein polypeptide D3 LSM4 0.167 U6 snRNA-associated Sm-like protein 4 SNRPD1 0.159 small nuclear ribonucleoprotein D1 polypeptide 16kDa ... LOC100129492 0.110 PREDICTED: similar to small nuclear ribonucleoprote... LSM10 0.066 LSM10, U7 small nuclear RNA associated MBD2 0.031 methyl-CpG binding domain protein 2 testis-specific i... MBD2 0.031 methyl-CpG binding domain protein 2 isoform 1 RBM26 0.031 RNA binding motif protein 26 PLG 0.026 plasminogen ZC3H4 0.022 zinc finger CCCH-type containing 4 ITGB1 0.018 integrin beta 1 isoform 1C-1 precursor ITGB1 0.018 integrin beta 1 isoform 1B precursor ITGB1 0.018 integrin beta 1 isoform 1A precursor ITGB1 0.018 integrin beta 1 isoform 1A precursor ITGB1 0.018 integrin beta 1 isoform 1C-2 precursor ITGB1 0.018 integrin beta 1 isoform 1D precursor LOC100291766 0.018 PREDICTED: hypothetical protein XP_002345718 LOC100290642 0.018 PREDICTED: hypothetical protein XP_002346613 LOC100288489 0.018 PREDICTED: hypothetical protein XP_002342406 TNRC18 0.018 trinucleotide repeat containing 18 TCF7 0.013 transcription factor 7 (T-cell specific, HMG-box) is... C1orf77 0.013 small protein rich in arginine and glycine LARP1B 0.013 La ribonucleoprotein domain family member 2 isoform ... LARP1B 0.013 La ribonucleoprotein domain family member 2 isoform ... LARP1B 0.013 La ribonucleoprotein domain family member 2 isoform ... SERBP1 0.013 SERPINE1 mRNA binding protein 1 isoform 4 SERBP1 0.013 SERPINE1 mRNA binding protein 1 isoform 3 SERBP1 0.013 SERPINE1 mRNA binding protein 1 isoform 2 SERBP1 0.013 SERPINE1 mRNA binding protein 1 isoform 1 ZNF579 0.013 zinc finger protein 579 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.