MBD2 28981

Name: MBD2	Sequence: fasta or formatted (411aa)		NCBI GI: 4505117
Description: methyl-CpG binding domain protein 2 isoform 1		Referenced in: DNA Methylation DNases, Recombination, and DNA Repair Histones, Related Proteins, and Modifying Enzymes Small RNAs in RNA Processing Testes and Sperm
Other entries for this name: alt prot [302aa] methyl-CpG binding domain protein 2 testis-specific isoform
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.3 30 2 C cysteine 1.5 6 2 D aspartate 4.4 18 1 E glutamate 6.1 25 2 F phenylalanine 1.9 8 1 G glycine 16.8 69 4 H histidine 0.7 3 1 I isoleucine 2.7 11 2 K lysine 6.6 27 2 L leucine 6.1 25 2 M methionine 2.2 9 2 N asparagine 2.9 12 1 P proline 7.5 31 2 Q glutamine 5.1 21 2 R arginine 9.5 39 2 S serine 8.5 35 2 T threonine 3.9 16 2 V valine 4.6 19 1 W tryptophan 1.0 4 1 Y tyrosine 0.7 3 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 methyl-CpG binding domain protein 2 isoform 1 MBD2 0.577 methyl-CpG binding domain protein 2 testis-specific i... MBD3 0.459 methyl-CpG binding domain protein 3 MBD3L1 0.134 methyl-CpG binding domain protein 3-like MBD1 0.075 methyl-CpG binding domain protein 1 isoform 2 MBD1 0.075 methyl-CpG binding domain protein 1 isoform 4 MBD1 0.075 methyl-CpG binding domain protein 1 isoform PCM1 [Ho... MBD1 0.075 methyl-CpG binding domain protein 1 isoform 1 MBD1 0.075 methyl-CpG binding domain protein 1 isoform 3 [Homo... MBD3L3 0.066 PREDICTED: methyl-CpG-binding domain protein 3-like ... LOC729458 0.066 PREDICTED: similar to methyl-CpG binding domain pro... MBD3L2 0.066 methyl-CpG binding domain protein 3-like 2 LOC100134199 0.066 PREDICTED: similar to methyl-CpG binding domain pro... MBD3L4 0.066 PREDICTED: methyl-CpG-binding domain protein 3-like ... MBD3L5 0.066 hypothetical protein LOC284428 FAM98B 0.061 family with sequence similarity 98, member B isofor... MECP2 0.060 methyl CpG binding protein 2 isoform 2 MECP2 0.060 methyl CpG binding protein 2 isoform 1 KRT9 0.054 keratin 9 KRT2 0.052 keratin 2 KRT10 0.050 keratin 10 LOR 0.050 loricrin KRT1 0.050 keratin 1 IRS4 0.050 insulin receptor substrate 4 KRT3 0.049 keratin 3 FBL 0.045 fibrillarin C1orf77 0.045 small protein rich in arginine and glycine TAF15 0.041 TBP-associated factor 15 isoform 2 TAF15 0.041 TBP-associated factor 15 isoform 1 PPP1R10 0.039 protein phosphatase 1, regulatory subunit 10 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.