LOC390245 22496

Name: LOC390245	Sequence: fasta or formatted (506aa)		NCBI GI: 239755681
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Other entries for this name: alt prot {506aa} PREDICTED: hypothetical protein alt mRNA {506aa} PREDICTED: hypothetical protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 33 2 C cysteine 2.4 12 2 D aspartate 3.4 17 2 E glutamate 6.1 31 2 F phenylalanine 4.0 20 1 G glycine 8.9 45 2 H histidine 4.0 20 1 I isoleucine 3.6 18 1 K lysine 4.0 20 4 L leucine 8.1 41 2 M methionine 3.0 15 1 N asparagine 3.6 18 1 P proline 6.3 32 2 Q glutamine 5.7 29 2 R arginine 6.1 31 2 S serine 6.9 35 2 T threonine 6.9 35 2 V valine 4.7 24 2 W tryptophan 2.0 10 1 Y tyrosine 4.0 20 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC390245 1.000 PREDICTED: hypothetical protein LOC390245 0.998 PREDICTED: hypothetical protein LOC100129053 0.797 PREDICTED: hypothetical protein LOC100129053 0.797 PREDICTED: hypothetical protein LOC100129053 0.797 PREDICTED: hypothetical protein KDM4D 0.618 jumonji domain containing 2D KDM4B 0.499 jumonji domain containing 2B KDM4C 0.466 jumonji domain containing 2C isoform 3 KDM4C 0.466 jumonji domain containing 2C isoform 4 KDM4C 0.466 jumonji domain containing 2C isoform 2 KDM4C 0.466 jumonji domain containing 2C isoform 1 KDM4A 0.455 jumonji domain containing 2A KDM5A 0.121 retinoblastoma binding protein 2 isoform 1 KDM5A 0.121 retinoblastoma binding protein 2 isoform 2 KDM5D 0.115 jumonji, AT rich interactive domain 1D isoform 1 [H... KDM5C 0.113 jumonji, AT rich interactive domain 1C isoform 2 [H... KDM5C 0.113 jumonji, AT rich interactive domain 1C isoform 1 [H... KDM5D 0.112 jumonji, AT rich interactive domain 1D isoform 3 [H... KDM5D 0.112 jumonji, AT rich interactive domain 1D isoform 2 [Ho... KDM5B 0.104 jumonji, AT rich interactive domain 1B LOC100133760 0.104 PREDICTED: similar to Jumonji, AT rich interactive ... JARID2 0.053 jumonji, AT rich interactive domain 2 protein MBD2 0.013 methyl-CpG binding domain protein 2 testis-specific i... MBD2 0.013 methyl-CpG binding domain protein 2 isoform 1 LOC100129492 0.012 PREDICTED: similar to small nuclear ribonucleoprote... SNRPD1 0.012 small nuclear ribonucleoprotein D1 polypeptide 16kDa ... ZNF579 0.012 zinc finger protein 579 MESP2 0.010 mesoderm posterior 2 homolog SSPO 0.010 SCO-spondin Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.