Guide to the Human Genome
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Name: PPAN Sequence: fasta or formatted (473aa) NCBI GI: 47174861
Description:

peter pan homolog

Referenced in:

Nucleus and Nucleolus
Small RNAs in RNA Processing

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         36           2
 C cysteine            1.1          5           1
 D aspartate           4.4         21           3
 E glutamate           7.0         33           3
 F phenylalanine       3.4         16           1
 G glycine             8.2         39           2
 H histidine           2.7         13           1
 I isoleucine          2.7         13           1
 K lysine              7.8         37           2
 L leucine             9.3         44           2
 M methionine          3.0         14           1
 N asparagine          3.2         15           1
 P proline             4.7         22           2
 Q glutamine           7.0         33           2
 R arginine           10.1         48           2
 S serine              6.6         31           2
 T threonine           3.6         17           1
 V valine              6.1         29           2
 W tryptophan          0.2          1           1
 Y tyrosine            1.3          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   peter pan homolog 
PPAN-P2RY11           0.898   PPAN-P2RY11 protein 
BRWD3                 0.020   bromodomain and WD repeat domain containing 3 [Homo...
SART3                 0.020   squamous cell carcinoma antigen recognized by T cells...
HABP4                 0.019   hyaluronan binding protein 4 
LOC100292370          0.019   PREDICTED: hypothetical protein 
LOC100286959          0.018   PREDICTED: hypothetical protein XP_002343921 
PLEC1                 0.018   plectin 1 isoform 11 
PLEC1                 0.018   plectin 1 isoform 10 
PLEC1                 0.018   plectin 1 isoform 8 
PLEC1                 0.018   plectin 1 isoform 7 
PLEC1                 0.018   plectin 1 isoform 6 
PLEC1                 0.018   plectin 1 isoform 3 
PLEC1                 0.018   plectin 1 isoform 2 
PLEC1                 0.018   plectin 1 isoform 1 
ABCF1                 0.016   ATP-binding cassette, sub-family F, member 1 isoform...
ABCF1                 0.016   ATP-binding cassette, sub-family F, member 1 isoform...
AEBP2                 0.016   AE binding protein 2 isoform b 
CROP                  0.016   cisplatin resistance-associated overexpressed protei...
CROP                  0.016   cisplatin resistance-associated overexpressed protei...
AEBP2                 0.016   AE binding protein 2 isoform a 
MAP7D2                0.016   MAP7 domain containing 2 
WDR87                 0.016   NYD-SP11 protein 
SNRNP70               0.016   U1 small nuclear ribonucleoprotein 70 kDa 
ANKHD1                0.016   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.016   ANKHD1-EIF4EBP3 protein 
TRAF3IP1              0.015   TNF receptor-associated factor 3 interacting protei...
TRAF3IP1              0.015   TNF receptor-associated factor 3 interacting protein...
KIAA1211              0.015   hypothetical protein LOC57482 
SFRS4                 0.015   splicing factor, arginine/serine-rich 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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