CD1E 746

Name: CD1E	Sequence: fasta or formatted (187aa)		NCBI GI: 110618236
Description: CD1E antigen isoform e precursor		Referenced in: HLA and Related Proteins
Other entries for this name: alt prot [376aa] CD1E antigen isoform b precursor alt prot [290aa] CD1E antigen isoform c precursor alt prot [321aa] CD1E antigen isoform d precursor alt prot [101aa] CD1E antigen isoform f precursor alt prot [388aa] CD1E antigen isoform a precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 10 2 C cysteine 3.7 7 2 D aspartate 3.2 6 1 E glutamate 3.7 7 1 F phenylalanine 3.2 6 1 G glycine 8.6 16 2 H histidine 2.7 5 1 I isoleucine 4.3 8 2 K lysine 5.3 10 2 L leucine 13.9 26 3 M methionine 2.1 4 1 N asparagine 3.2 6 1 P proline 4.8 9 1 Q glutamine 4.8 9 1 R arginine 5.3 10 1 S serine 5.9 11 2 T threonine 4.8 9 1 V valine 9.1 17 3 W tryptophan 4.3 8 1 Y tyrosine 1.6 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CD1E antigen isoform e precursor CD1E 0.892 CD1E antigen isoform b precursor CD1E 0.867 CD1E antigen isoform a precursor CD1D 0.461 CD1D antigen precursor CD1E 0.439 CD1E antigen isoform d precursor CD1A 0.431 CD1A antigen precursor CD1B 0.425 CD1B antigen precursor CD1E 0.412 CD1E antigen isoform f precursor CD1C 0.374 CD1C antigen precursor CD1E 0.304 CD1E antigen isoform c precursor MR1 0.068 major histocompatibility complex, class I-related [Ho... LOC652614 0.068 PREDICTED: similar to MHC class I antigen AZGP1 0.065 alpha-2-glycoprotein 1, zinc HLA-DPB1 0.065 major histocompatibility complex, class II, DP beta ... HFE 0.060 hemochromatosis protein isoform 10 precursor HFE 0.060 hemochromatosis protein isoform 9 precursor HFE 0.060 hemochromatosis protein isoform 8 precursor HFE 0.060 hemochromatosis protein isoform 7 precursor HFE 0.060 hemochromatosis protein isoform 6 precursor HFE 0.060 hemochromatosis protein isoform 4 precursor HFE 0.060 hemochromatosis protein isoform 3 precursor HFE 0.060 hemochromatosis protein isoform 1 precursor LOC100294275 0.060 PREDICTED: similar to major histocompatibility comp... LOC100294275 0.060 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.060 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.060 PREDICTED: similar to major histocompatibility comp... HLA-DRB3 0.057 major histocompatibility complex, class II, DR beta ... HLA-DRB4 0.057 major histocompatibility complex, class II, DR beta ... LOC100294036 0.057 PREDICTED: similar to HLA class II histocompatibili... HLA-DRB4 0.057 PREDICTED: major histocompatibility complex, class ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.