CD1E 747

Name: CD1E	Sequence: fasta or formatted (101aa)		NCBI GI: 110618238
Description: CD1E antigen isoform f precursor		Referenced in: HLA and Related Proteins
Other entries for this name: alt prot [376aa] CD1E antigen isoform b precursor alt prot [290aa] CD1E antigen isoform c precursor alt prot [321aa] CD1E antigen isoform d precursor alt prot [187aa] CD1E antigen isoform e precursor alt prot [388aa] CD1E antigen isoform a precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.0 3 1 C cysteine 5.9 6 2 D aspartate 5.0 5 1 E glutamate 5.9 6 1 F phenylalanine 5.0 5 1 G glycine 10.9 11 1 H histidine 4.0 4 1 I isoleucine 2.0 2 1 K lysine 2.0 2 1 L leucine 11.9 12 3 M methionine 3.0 3 1 N asparagine 2.0 2 1 P proline 9.9 10 1 Q glutamine 4.0 4 1 R arginine 4.0 4 1 S serine 5.9 6 1 T threonine 3.0 3 1 V valine 5.9 6 1 W tryptophan 5.0 5 2 Y tyrosine 2.0 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CD1E antigen isoform f precursor CD1E 0.806 CD1E antigen isoform c precursor CD1E 0.738 CD1E antigen isoform e precursor CD1E 0.544 CD1E antigen isoform a precursor CD1E 0.544 CD1E antigen isoform b precursor CD1A 0.481 CD1A antigen precursor CD1B 0.481 CD1B antigen precursor CD1D 0.471 CD1D antigen precursor CD1C 0.379 CD1C antigen precursor CD1E 0.335 CD1E antigen isoform d precursor MR1 0.083 major histocompatibility complex, class I-related [Ho... HLA-DRB3 0.063 major histocompatibility complex, class II, DR beta ... LOC100294036 0.063 PREDICTED: similar to HLA class II histocompatibili... LOC100294468 0.063 PREDICTED: similar to HLA class II histocompatibili... LOC100294275 0.063 PREDICTED: similar to major histocompatibility comp... LOC100294275 0.063 PREDICTED: similar to major histocompatibility comp... LOC100294189 0.063 PREDICTED: similar to HLA class II histocompatibili... LOC100294189 0.063 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.063 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.063 PREDICTED: similar to HLA class II histocompatibili... LOC100290966 0.058 PREDICTED: hypothetical protein XP_002346811 LOC100294276 0.058 PREDICTED: similar to major histocompatibility comp... LOC100294276 0.058 PREDICTED: similar to major histocompatibility comp... HLA-DPB1 0.058 major histocompatibility complex, class II, DP beta ... HLA-DRB4 0.058 major histocompatibility complex, class II, DR beta ... HLA-DRB4 0.058 PREDICTED: major histocompatibility complex, class ... LOC100133811 0.058 PREDICTED: similar to HLA class II histocompatibili... HLA-DRB1 0.053 major histocompatibility complex, class II, DR beta... HLA-DRB5 0.053 major histocompatibility complex, class II, DR beta ... HLA-DPA1 0.049 major histocompatibility complex, class II, DP alpha... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.