CD1E 744

Name: CD1E	Sequence: fasta or formatted (290aa)		NCBI GI: 110618232
Description: CD1E antigen isoform c precursor		Referenced in: HLA and Related Proteins
Other entries for this name: alt prot [376aa] CD1E antigen isoform b precursor alt prot [321aa] CD1E antigen isoform d precursor alt prot [187aa] CD1E antigen isoform e precursor alt prot [101aa] CD1E antigen isoform f precursor alt prot [388aa] CD1E antigen isoform a precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 18 2 C cysteine 3.1 9 2 D aspartate 3.1 9 1 E glutamate 5.9 17 2 F phenylalanine 6.2 18 1 G glycine 9.0 26 1 H histidine 3.8 11 1 I isoleucine 4.5 13 1 K lysine 3.1 9 1 L leucine 12.4 36 3 M methionine 2.4 7 1 N asparagine 3.1 9 1 P proline 5.9 17 1 Q glutamine 7.6 22 1 R arginine 3.8 11 1 S serine 8.3 24 2 T threonine 2.8 8 1 V valine 3.1 9 1 W tryptophan 3.4 10 2 Y tyrosine 2.4 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CD1E antigen isoform c precursor CD1E 0.909 CD1E antigen isoform a precursor CD1E 0.909 CD1E antigen isoform b precursor CD1E 0.834 CD1E antigen isoform d precursor CD1B 0.462 CD1B antigen precursor CD1A 0.459 CD1A antigen precursor CD1D 0.442 CD1D antigen precursor CD1C 0.433 CD1C antigen precursor CD1E 0.281 CD1E antigen isoform f precursor CD1E 0.190 CD1E antigen isoform e precursor FCGRT 0.061 Fc fragment of IgG, receptor, transporter, alpha [H... FCGRT 0.061 Fc fragment of IgG, receptor, transporter, alpha [Hom... MR1 0.051 major histocompatibility complex, class I-related [Ho... HFE 0.041 hemochromatosis protein isoform 7 precursor HLA-A 0.037 major histocompatibility complex, class I, A precurs... HFE 0.037 hemochromatosis protein isoform 9 precursor HFE 0.037 hemochromatosis protein isoform 1 precursor AZGP1 0.034 alpha-2-glycoprotein 1, zinc HFE 0.034 hemochromatosis protein isoform 8 precursor HLA-F 0.032 major histocompatibility complex, class I, F isofor... HLA-F 0.032 major histocompatibility complex, class I, F isofor... HFE 0.032 hemochromatosis protein isoform 6 precursor HLA-C 0.030 major histocompatibility complex, class I, C precurs... HLA-G 0.030 major histocompatibility complex, class I, G precurso... LOC652614 0.027 PREDICTED: similar to MHC class I antigen HLA-DPB1 0.027 major histocompatibility complex, class II, DP beta ... LOC100294468 0.024 PREDICTED: similar to HLA class II histocompatibili... LOC100294189 0.024 PREDICTED: similar to HLA class II histocompatibili... LOC100294189 0.024 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.024 PREDICTED: similar to HLA class II histocompatibili... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.