HLA-DRB4 32310

Name: HLA-DRB4	Sequence: fasta or formatted (266aa)		NCBI GI: 52630344
Description: major histocompatibility complex, class II, DR beta 4 precursor		Referenced in: HLA and Related Proteins
Other entries for this name: alt prot [278aa] PREDICTED: major histocompatibility complex, class II, DR beta 4
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.5 12 2 C cysteine 2.6 7 1 D aspartate 2.3 6 1 E glutamate 6.8 18 2 F phenylalanine 3.8 10 1 G glycine 8.6 23 2 H histidine 1.9 5 2 I isoleucine 1.9 5 1 K lysine 3.0 8 1 L leucine 11.3 30 2 M methionine 2.3 6 2 N asparagine 4.1 11 1 P proline 4.5 12 1 Q glutamine 6.4 17 1 R arginine 6.0 16 3 S serine 7.5 20 2 T threonine 6.8 18 1 V valine 9.0 24 2 W tryptophan 1.9 5 1 Y tyrosine 4.9 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 major histocompatibility complex, class II, DR beta ... HLA-DRB4 0.874 PREDICTED: major histocompatibility complex, class ... HLA-DRB1 0.868 major histocompatibility complex, class II, DR beta... LOC100294468 0.868 PREDICTED: similar to HLA class II histocompatibili... LOC100290966 0.864 PREDICTED: hypothetical protein XP_002346811 LOC100294189 0.857 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.857 PREDICTED: similar to HLA class II histocompatibili... LOC100294276 0.857 PREDICTED: similar to major histocompatibility comp... LOC100294275 0.855 PREDICTED: similar to major histocompatibility comp... HLA-DRB5 0.845 major histocompatibility complex, class II, DR beta ... HLA-DRB3 0.832 major histocompatibility complex, class II, DR beta ... LOC100294276 0.824 PREDICTED: similar to major histocompatibility comp... LOC100294275 0.824 PREDICTED: similar to major histocompatibility comp... LOC100294036 0.736 PREDICTED: similar to HLA class II histocompatibili... LOC100294189 0.736 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.736 PREDICTED: similar to HLA class II histocompatibili... LOC100133583 0.597 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.589 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.589 PREDICTED: similar to major histocompatibility comp... HLA-DQB1 0.589 major histocompatibility complex, class II, DQ beta... LOC100293977 0.585 PREDICTED: similar to major histocompatibility comp... LOC100294191 0.585 PREDICTED: similar to major histocompatibility comp... LOC100133583 0.579 PREDICTED: similar to major histocompatibility comp... LOC100294278 0.579 PREDICTED: similar to major histocompatibility comp... LOC100294115 0.579 PREDICTED: similar to major histocompatibility comp... LOC100133811 0.572 PREDICTED: similar to HLA class II histocompatibili... HLA-DPB1 0.541 major histocompatibility complex, class II, DP beta ... HLA-DOB 0.511 major histocompatibility complex, class II, DO beta p... LOC651845 0.451 PREDICTED: similar to MHC class II antigen LOC100133661 0.444 PREDICTED: similar to MHC class II antigen Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.