HLA-DRB3 9680

Name: HLA-DRB3	Sequence: fasta or formatted (266aa)		NCBI GI: 17986005
Description: major histocompatibility complex, class II, DR beta 3 precursor		Referenced in: HLA and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.5 12 2 C cysteine 1.9 5 1 D aspartate 2.6 7 1 E glutamate 6.8 18 2 F phenylalanine 6.0 16 2 G glycine 9.4 25 2 H histidine 3.0 8 2 I isoleucine 1.1 3 1 K lysine 3.0 8 1 L leucine 10.9 29 2 M methionine 1.5 4 1 N asparagine 3.4 9 1 P proline 3.8 10 1 Q glutamine 5.3 14 1 R arginine 7.9 21 2 S serine 8.3 22 2 T threonine 6.0 16 1 V valine 9.8 26 2 W tryptophan 1.5 4 1 Y tyrosine 3.4 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 major histocompatibility complex, class II, DR beta ... LOC100294275 0.954 PREDICTED: similar to major histocompatibility comp... LOC100294275 0.923 PREDICTED: similar to major histocompatibility comp... LOC100294276 0.919 PREDICTED: similar to major histocompatibility comp... LOC100294189 0.906 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.906 PREDICTED: similar to HLA class II histocompatibili... LOC100290966 0.898 PREDICTED: hypothetical protein XP_002346811 LOC100294468 0.898 PREDICTED: similar to HLA class II histocompatibili... LOC100294276 0.890 PREDICTED: similar to major histocompatibility comp... HLA-DRB1 0.884 major histocompatibility complex, class II, DR beta... HLA-DRB5 0.857 major histocompatibility complex, class II, DR beta ... HLA-DRB4 0.838 major histocompatibility complex, class II, DR beta ... LOC100294189 0.802 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.802 PREDICTED: similar to HLA class II histocompatibili... LOC100294036 0.769 PREDICTED: similar to HLA class II histocompatibili... HLA-DRB4 0.738 PREDICTED: major histocompatibility complex, class ... LOC100133811 0.603 PREDICTED: similar to HLA class II histocompatibili... LOC100293977 0.584 PREDICTED: similar to major histocompatibility comp... LOC100294191 0.584 PREDICTED: similar to major histocompatibility comp... LOC100133583 0.582 PREDICTED: similar to major histocompatibility comp... LOC100294278 0.580 PREDICTED: similar to major histocompatibility comp... LOC100294115 0.580 PREDICTED: similar to major histocompatibility comp... LOC100133583 0.576 PREDICTED: similar to major histocompatibility comp... HLA-DQB1 0.572 major histocompatibility complex, class II, DQ beta... LOC100294318 0.566 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.566 PREDICTED: similar to major histocompatibility comp... HLA-DPB1 0.559 major histocompatibility complex, class II, DP beta ... HLA-DOB 0.501 major histocompatibility complex, class II, DO beta p... LOC651845 0.449 PREDICTED: similar to MHC class II antigen LOC100133661 0.316 PREDICTED: similar to MHC class II antigen Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.