HLA-DRB4 23482

Name: HLA-DRB4	Sequence: fasta or formatted (278aa)		NCBI GI: 239758090
Description: PREDICTED: major histocompatibility complex, class II, DR beta 4		Referenced in: HLA and Related Proteins
Other entries for this name: alt prot [266aa] major histocompatibility complex, class II, DR beta 4 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.3 12 1 C cysteine 2.2 6 1 D aspartate 2.2 6 1 E glutamate 6.8 19 2 F phenylalanine 4.0 11 1 G glycine 10.1 28 2 H histidine 2.2 6 2 I isoleucine 2.2 6 1 K lysine 2.5 7 1 L leucine 8.3 23 2 M methionine 1.8 5 2 N asparagine 4.3 12 1 P proline 4.7 13 1 Q glutamine 6.5 18 1 R arginine 7.6 21 3 S serine 7.2 20 1 T threonine 6.1 17 1 V valine 10.8 30 2 W tryptophan 1.8 5 1 Y tyrosine 4.7 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: major histocompatibility complex, class ... HLA-DRB4 0.832 major histocompatibility complex, class II, DR beta ... HLA-DRB1 0.719 major histocompatibility complex, class II, DR beta... LOC100294275 0.719 PREDICTED: similar to major histocompatibility comp... LOC100290966 0.714 PREDICTED: hypothetical protein XP_002346811 LOC100294468 0.712 PREDICTED: similar to HLA class II histocompatibili... LOC100294276 0.709 PREDICTED: similar to major histocompatibility comp... LOC100294275 0.707 PREDICTED: similar to major histocompatibility comp... HLA-DRB5 0.703 major histocompatibility complex, class II, DR beta ... LOC100294189 0.701 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.701 PREDICTED: similar to HLA class II histocompatibili... LOC100294189 0.701 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.701 PREDICTED: similar to HLA class II histocompatibili... HLA-DRB3 0.698 major histocompatibility complex, class II, DR beta ... LOC100294276 0.696 PREDICTED: similar to major histocompatibility comp... LOC100133811 0.590 PREDICTED: similar to HLA class II histocompatibili... LOC100294036 0.587 PREDICTED: similar to HLA class II histocompatibili... HLA-DQB1 0.528 major histocompatibility complex, class II, DQ beta... LOC100133583 0.528 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.521 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.521 PREDICTED: similar to major histocompatibility comp... LOC100293977 0.517 PREDICTED: similar to major histocompatibility comp... LOC100294191 0.517 PREDICTED: similar to major histocompatibility comp... LOC100133583 0.512 PREDICTED: similar to major histocompatibility comp... LOC100294278 0.512 PREDICTED: similar to major histocompatibility comp... LOC100294115 0.512 PREDICTED: similar to major histocompatibility comp... HLA-DPB1 0.501 major histocompatibility complex, class II, DP beta ... HLA-DOB 0.468 major histocompatibility complex, class II, DO beta p... LOC651845 0.430 PREDICTED: similar to MHC class II antigen LOC100133661 0.302 PREDICTED: similar to MHC class II antigen Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.