CD1C 742

Name: CD1C	Sequence: fasta or formatted (333aa)		NCBI GI: 110618227
Description: CD1C antigen precursor		Referenced in: HLA and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.5 15 1 C cysteine 2.1 7 1 D aspartate 3.9 13 1 E glutamate 5.4 18 2 F phenylalanine 5.7 19 2 G glycine 8.4 28 2 H histidine 4.5 15 2 I isoleucine 4.5 15 2 K lysine 2.7 9 2 L leucine 14.1 47 3 M methionine 1.2 4 1 N asparagine 3.6 12 1 P proline 3.9 13 1 Q glutamine 6.0 20 1 R arginine 3.3 11 1 S serine 9.0 30 2 T threonine 3.3 11 2 V valine 7.2 24 2 W tryptophan 3.6 12 1 Y tyrosine 3.0 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CD1C antigen precursor CD1B 0.562 CD1B antigen precursor CD1A 0.544 CD1A antigen precursor CD1E 0.477 CD1E antigen isoform a precursor CD1E 0.471 CD1E antigen isoform b precursor CD1D 0.447 CD1D antigen precursor CD1E 0.382 CD1E antigen isoform c precursor CD1E 0.329 CD1E antigen isoform d precursor CD1E 0.206 CD1E antigen isoform e precursor CD1E 0.116 CD1E antigen isoform f precursor MR1 0.080 major histocompatibility complex, class I-related [Ho... LOC652614 0.075 PREDICTED: similar to MHC class I antigen AZGP1 0.072 alpha-2-glycoprotein 1, zinc HFE 0.067 hemochromatosis protein isoform 9 precursor HFE 0.067 hemochromatosis protein isoform 1 precursor HLA-G 0.066 major histocompatibility complex, class I, G precurso... HLA-F 0.064 major histocompatibility complex, class I, F isofor... HLA-F 0.064 major histocompatibility complex, class I, F isofor... HFE 0.063 hemochromatosis protein isoform 7 precursor FCGRT 0.060 Fc fragment of IgG, receptor, transporter, alpha [H... FCGRT 0.060 Fc fragment of IgG, receptor, transporter, alpha [Hom... HFE 0.060 hemochromatosis protein isoform 6 precursor HLA-C 0.058 major histocompatibility complex, class I, C precurs... HLA-A 0.058 major histocompatibility complex, class I, A precurs... HFE 0.055 hemochromatosis protein isoform 8 precursor MICA 0.051 MHC class I polypeptide-related sequence A MICB 0.049 MHC class I polypeptide-related sequence B HLA-E 0.049 major histocompatibility complex, class I, E precurs... HLA-B 0.046 major histocompatibility complex, class I, B precurs... HLA-DPB1 0.045 major histocompatibility complex, class II, DP beta ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.