CD1E 748

Name: CD1E	Sequence: fasta or formatted (388aa)		NCBI GI: 110618240
Description: CD1E antigen isoform a precursor		Referenced in: HLA and Related Proteins
Other entries for this name: alt prot [376aa] CD1E antigen isoform b precursor alt prot [290aa] CD1E antigen isoform c precursor alt prot [321aa] CD1E antigen isoform d precursor alt prot [187aa] CD1E antigen isoform e precursor alt prot [101aa] CD1E antigen isoform f precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 25 2 C cysteine 2.6 10 2 D aspartate 2.6 10 1 E glutamate 4.6 18 2 F phenylalanine 4.9 19 1 G glycine 8.0 31 2 H histidine 3.4 13 1 I isoleucine 5.2 20 2 K lysine 4.6 18 2 L leucine 13.1 51 3 M methionine 2.1 8 1 N asparagine 3.9 15 1 P proline 4.6 18 1 Q glutamine 7.0 27 1 R arginine 4.4 17 1 S serine 8.2 32 2 T threonine 3.9 15 1 V valine 5.2 20 3 W tryptophan 3.4 13 1 Y tyrosine 2.1 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CD1E antigen isoform a precursor CD1E 0.956 CD1E antigen isoform b precursor CD1E 0.742 CD1E antigen isoform d precursor CD1E 0.689 CD1E antigen isoform c precursor CD1D 0.434 CD1D antigen precursor CD1B 0.427 CD1B antigen precursor CD1A 0.426 CD1A antigen precursor CD1E 0.411 CD1E antigen isoform e precursor CD1C 0.411 CD1C antigen precursor CD1E 0.144 CD1E antigen isoform f precursor FCGRT 0.063 Fc fragment of IgG, receptor, transporter, alpha [H... FCGRT 0.063 Fc fragment of IgG, receptor, transporter, alpha [Hom... HFE 0.053 hemochromatosis protein isoform 7 precursor HFE 0.051 hemochromatosis protein isoform 9 precursor HFE 0.051 hemochromatosis protein isoform 1 precursor MR1 0.050 major histocompatibility complex, class I-related [Ho... LOC652614 0.049 PREDICTED: similar to MHC class I antigen HFE 0.047 hemochromatosis protein isoform 8 precursor HLA-F 0.046 major histocompatibility complex, class I, F isofor... HLA-F 0.046 major histocompatibility complex, class I, F isofor... HFE 0.046 hemochromatosis protein isoform 6 precursor HLA-G 0.046 major histocompatibility complex, class I, G precurso... HLA-A 0.046 major histocompatibility complex, class I, A precurs... AZGP1 0.045 alpha-2-glycoprotein 1, zinc HLA-C 0.042 major histocompatibility complex, class I, C precurs... HLA-B 0.037 major histocompatibility complex, class I, B precurs... HLA-DPB1 0.035 major histocompatibility complex, class II, DP beta ... HLA-E 0.032 major histocompatibility complex, class I, E precurs... HFE 0.031 hemochromatosis protein isoform 10 precursor HFE 0.031 hemochromatosis protein isoform 4 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.