PCDH15 13780

Name: PCDH15	Sequence: fasta or formatted (1915aa)		NCBI GI: 218505783
Description: protocadherin 15 isoform CD1-8 precursor		Referenced in: Cadherins and Related Proteins Auditory and Vestibular Functions
Other entries for this name: alt prot [1955aa] protocadherin 15 isoform CD1-4 precursor alt prot [1962aa] protocadherin 15 isoform CD1-1 precursor alt prot [1957aa] protocadherin 15 isoform CD1-2 precursor alt prot [1886aa] protocadherin 15 isoform CD1-6 precursor alt prot [1952aa] protocadherin 15 isoform CD1-7 precursor alt prot [1935aa] protocadherin 15 isoform CD1-9 precursor alt prot [1790aa] protocadherin 15 isoform CD2-1 precursor alt prot [1539aa] protocadherin 15 isoform CD2-2 precursor alt prot [1682aa] protocadherin 15 isoform CD3-1 precursor alt prot [1677aa] protocadherin 15 isoform CD3-2 precursor alt prot [1932aa] protocadherin 15 isoform CD1-10 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 113 3 C cysteine 1.3 24 2 D aspartate 6.1 116 3 E glutamate 6.4 123 3 F phenylalanine 3.7 71 2 G glycine 5.2 99 2 H histidine 1.5 29 1 I isoleucine 6.9 133 3 K lysine 3.9 75 2 L leucine 8.4 161 2 M methionine 1.7 32 1 N asparagine 5.0 95 2 P proline 9.2 176 9 Q glutamine 3.7 71 2 R arginine 4.8 91 2 S serine 7.5 143 3 T threonine 7.6 145 5 V valine 7.8 150 3 W tryptophan 0.2 4 1 Y tyrosine 3.3 64 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin 15 isoform CD1-8 precursor PCDH15 0.995 protocadherin 15 isoform CD1-7 precursor PCDH15 0.994 protocadherin 15 isoform CD1-4 precursor PCDH15 0.992 protocadherin 15 isoform CD1-2 precursor PCDH15 0.991 protocadherin 15 isoform CD1-1 precursor PCDH15 0.978 protocadherin 15 isoform CD1-10 precursor PCDH15 0.977 protocadherin 15 isoform CD1-9 precursor PCDH15 0.727 protocadherin 15 isoform CD3-2 precursor PCDH15 0.727 protocadherin 15 isoform CD2-2 precursor PCDH15 0.726 protocadherin 15 isoform CD3-1 precursor PCDH15 0.724 protocadherin 15 isoform CD2-1 precursor PCDH15 0.674 protocadherin 15 isoform CD1-6 precursor FAT4 0.081 FAT tumor suppressor homolog 4 FAT3 0.077 FAT tumor suppressor homolog 3 FAT1 0.073 FAT tumor suppressor 1 precursor CDH23 0.072 cadherin-like 23 isoform 1 precursor CELSR2 0.070 cadherin EGF LAG seven-pass G-type receptor 2 DCHS1 0.068 dachsous 1 precursor DCHS2 0.067 dachsous 2 isoform 1 CELSR3 0.066 cadherin EGF LAG seven-pass G-type receptor 3 [Homo... FAT2 0.064 FAT tumor suppressor 2 precursor CELSR1 0.064 cadherin EGF LAG seven-pass G-type receptor 1 DCHS2 0.051 dachsous 2 isoform 2 PCDH9 0.048 protocadherin 9 isoform 2 precursor PCDH9 0.048 protocadherin 9 isoform 1 precursor PCDH11Y 0.045 protocadherin 11 Y-linked isoform c PCDH11Y 0.045 protocadherin 11 Y-linked isoform b PCDH11Y 0.045 protocadherin 11 Y-linked isoform a PCDH11X 0.045 protocadherin 11 X-linked isoform a precursor PCDH11X 0.045 protocadherin 11 X-linked isoform d Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.