PCDH19 6243

Name: PCDH19	Sequence: fasta or formatted (1101aa)		NCBI GI: 157426847
Description: protocadherin 19 isoform a		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [1100aa] protocadherin 19 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 65 3 C cysteine 1.5 16 1 D aspartate 6.6 73 2 E glutamate 6.6 73 3 F phenylalanine 2.9 32 2 G glycine 5.8 64 2 H histidine 2.4 26 2 I isoleucine 5.7 63 2 K lysine 4.3 47 4 L leucine 8.4 93 4 M methionine 1.3 14 1 N asparagine 6.1 67 2 P proline 6.1 67 2 Q glutamine 3.4 37 2 R arginine 5.2 57 2 S serine 10.2 112 3 T threonine 5.6 62 2 V valine 8.5 94 2 W tryptophan 0.2 2 1 Y tyrosine 3.4 37 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin 19 isoform a PCDH19 0.997 protocadherin 19 isoform b PCDH17 0.442 protocadherin 17 precursor PCDH10 0.321 protocadherin 10 isoform 1 precursor PCDH10 0.292 protocadherin 10 isoform 2 precursor PCDH18 0.281 protocadherin 18 precursor PCDHAC2 0.239 protocadherin alpha subfamily C, 2 isoform 1 precurso... PCDHAC2 0.239 protocadherin alpha subfamily C, 2 isoform 2 precurs... PCDHA5 0.217 protocadherin alpha 5 isoform 1 precursor PCDHA5 0.217 protocadherin alpha 5 isoform 2 precursor PCDHGA4 0.216 protocadherin gamma subfamily A, 4 isoform 2 precurs... PCDHGA4 0.216 protocadherin gamma subfamily A, 4 isoform 1 precurs... PCDHGC4 0.216 protocadherin gamma subfamily C, 4 isoform 2 precurs... PCDHGC4 0.216 protocadherin gamma subfamily C, 4 isoform 1 precurs... PCDHA4 0.214 protocadherin alpha 4 isoform 2 precursor PCDHA4 0.214 protocadherin alpha 4 isoform 1 precursor PCDHA8 0.214 protocadherin alpha 8 isoform 2 precursor PCDHA8 0.214 protocadherin alpha 8 isoform 1 precursor PCDHA6 0.214 protocadherin alpha 6 isoform 2 precursor PCDHA6 0.214 protocadherin alpha 6 isoform 1 precursor PCDHA7 0.213 protocadherin alpha 7 isoform 2 precursor PCDHA7 0.213 protocadherin alpha 7 isoform 1 precursor PCDHGB2 0.213 protocadherin gamma subfamily B, 2 isoform 1 precurs... PCDHGB2 0.213 protocadherin gamma subfamily B, 2 isoform 2 precurs... PCDH12 0.212 protocadherin 12 precursor PCDHA11 0.211 protocadherin alpha 11 isoform 2 precursor PCDHA11 0.211 protocadherin alpha 11 isoform 1 precursor PCDHA13 0.211 protocadherin alpha 13 isoform 2 precursor PCDHA13 0.211 protocadherin alpha 13 isoform 1 precursor PCDHGC5 0.211 protocadherin gamma subfamily C, 5 isoform 2 precurs... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.