Guide to the Human Genome
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Name: CRIPAK Sequence: fasta or formatted (446aa) NCBI GI: 154937359
Description:

cysteine-rich PAK1 inhibitor

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.1         54           1
 C cysteine           13.0         58           1
 D aspartate           1.1          5           1
 E glutamate           3.6         16           1
 F phenylalanine       1.1          5           1
 G glycine             3.6         16           2
 H histidine           9.2         41           1
 I isoleucine          0.9          4           1
 K lysine              0.4          2           1
 L leucine             6.5         29           2
 M methionine          2.9         13           1
 N asparagine          0.2          1           1
 P proline            13.0         58           2
 Q glutamine           0.0          0           0
 R arginine            7.2         32           2
 S serine              6.7         30           1
 T threonine           6.5         29           1
 V valine              9.0         40           1
 W tryptophan          2.5         11           2
 Y tyrosine            0.4          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cysteine-rich PAK1 inhibitor 
MEGF6                 0.032   EGF-like-domain, multiple 3 
KRTAP10-6             0.030   keratin associated protein 10-6 
KRTAP10-7             0.029   keratin associated protein 10-7 
KRTAP10-4             0.027   keratin associated protein 10-4 
NOTCH4                0.024   notch4 preproprotein 
KRTAP10-10            0.021   keratin associated protein 10-10 
NFX1                  0.020   nuclear transcription factor, X-box binding 1 isofor...
NFX1                  0.020   nuclear transcription factor, X-box binding 1 isofor...
KCP                   0.020   cysteine rich BMP regulator 2 isoform 1 
KRTAP10-11            0.019   keratin associated protein 10-11 
SCARF1                0.019   scavenger receptor class F, member 1 isoform 5 prec...
KRTAP10-8             0.019   keratin associated protein 10-8 
GRN                   0.019   granulin precursor 
KRTAP10-9             0.018   keratin associated protein 10-9 
KRTAP10-1             0.017   keratin associated protein 10-1 
SSPO                  0.017   SCO-spondin 
LOC100289074          0.016   PREDICTED: hypothetical protein XP_002343632 
KRTAP10-3             0.016   keratin associated protein 10-3 
MEGF8                 0.015   multiple EGF-like-domains 8 
MEGF11                0.015   multiple EGF-like-domains 11 
VWF                   0.013   von Willebrand factor preproprotein 
NOTCH3                0.013   Notch homolog 3 
NOTCH2                0.013   notch 2 preproprotein 
LOC728341             0.013   PREDICTED: keratin-associated protein 9-2-like 1-li...
LOC100131696          0.013   PREDICTED: keratin associated protein 
LOC100293983          0.013   PREDICTED: similar to mucin, partial 
MEGF10                0.013   multiple EGF-like-domains 10 
LOC100131696          0.012   PREDICTED: keratin associated protein 
LOC100288060          0.012   PREDICTED: hypothetical protein XP_002343557 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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