Guide to the Human Genome
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Name: KRTAP10-10 Sequence: fasta or formatted (251aa) NCBI GI: 32140182
Description:

keratin associated protein 10-10

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         16           2
 C cysteine           24.3         61           3
 D aspartate           1.2          3           1
 E glutamate           1.6          4           1
 F phenylalanine       0.4          1           1
 G glycine             1.6          4           1
 H histidine           0.4          1           1
 I isoleucine          0.4          1           1
 K lysine              1.6          4           1
 L leucine             2.8          7           2
 M methionine          0.8          2           1
 N asparagine          0.4          1           1
 P proline            11.2         28           1
 Q glutamine           6.8         17           2
 R arginine            2.0          5           1
 S serine             20.3         51           3
 T threonine           6.4         16           2
 V valine              9.6         24           2
 W tryptophan          0.4          1           1
 Y tyrosine            1.6          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 10-10 
KRTAP10-11            0.749   keratin associated protein 10-11 
KRTAP10-1             0.744   keratin associated protein 10-1 
KRTAP10-9             0.729   keratin associated protein 10-9 
KRTAP10-6             0.711   keratin associated protein 10-6 
KRTAP10-5             0.698   keratin associated protein 10-5 
KRTAP10-2             0.675   keratin associated protein 10-2 
KRTAP10-12            0.667   keratin associated protein 10-12 
KRTAP10-7             0.662   keratin associated protein 10-7 
KRTAP10-8             0.613   keratin associated protein 10-8 
KRTAP10-4             0.565   keratin associated protein 10-4 
KRTAP10-3             0.493   keratin associated protein 10-3 
LOC100130599          0.436   PREDICTED: hypothetical protein 
LOC100130599          0.429   PREDICTED: similar to Keratin-associated protein 10...
KRTAP4-8              0.302   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.302   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-9              0.291   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-12             0.291   keratin associated protein 4-12 
KRTAP4-9              0.282   keratin associated protein 4-9 
KRTAP4-8              0.276   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.276   PREDICTED: similar to keratin associated protein 4-...
LOC100131696          0.271   PREDICTED: keratin associated protein 
KRTAP4-8              0.269   PREDICTED: keratin associated protein 4-8 
LOC100131696          0.267   PREDICTED: keratin associated protein 
KRTAP4-9              0.267   PREDICTED: keratin associated protein 4-9 isoform 2...
LOC100288060          0.267   PREDICTED: hypothetical protein XP_002343557 
KRTAP4-3              0.267   keratin associated protein 4-3 
KRTAP4-11             0.260   keratin associated protein 4-11 
KRTAP4-8              0.256   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.256   PREDICTED: similar to keratin associated protein 4-...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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