POLI 5556

Name: POLI	Sequence: fasta or formatted (740aa)		NCBI GI: 154350220
Description: DNA polymerase iota		Referenced in: DNA Polymerases
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.3 32 3 C cysteine 1.9 14 1 D aspartate 5.7 42 3 E glutamate 8.4 62 3 F phenylalanine 4.1 30 2 G glycine 5.5 41 3 H histidine 3.0 22 1 I isoleucine 4.2 31 2 K lysine 7.3 54 2 L leucine 9.9 73 2 M methionine 2.4 18 1 N asparagine 4.5 33 2 P proline 5.3 39 2 Q glutamine 5.0 37 2 R arginine 4.3 32 2 S serine 10.3 76 5 T threonine 4.2 31 2 V valine 7.2 53 2 W tryptophan 0.3 2 1 Y tyrosine 2.4 18 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 DNA polymerase iota POLH 0.082 DNA-directed DNA polymerase eta POLK 0.071 DNA-directed DNA polymerase kappa REV1 0.051 REV1-like isoform 2 REV1 0.045 REV1-like isoform 1 TCF12 0.007 transcription factor 12 isoform c TCF12 0.007 transcription factor 12 isoform b TCF12 0.007 transcription factor 12 isoform a TCF12 0.007 transcription factor 12 isoform a TCF12 0.007 transcription factor 12 isoform b COL11A1 0.006 alpha 1 type XI collagen isoform B preproprotein [Ho... SCN2A 0.006 sodium channel, voltage-gated, type II, alpha isofor... SCN2A 0.006 sodium channel, voltage-gated, type II, alpha isofor... SCN2A 0.006 sodium channel, voltage-gated, type II, alpha isofor... HUWE1 0.006 HECT, UBA and WWE domain containing 1 BPTF 0.006 bromodomain PHD finger transcription factor isoform ... MED1 0.006 mediator complex subunit 1 MUC12 0.005 PREDICTED: mucin 12 MLLT3 0.005 myeloid/lymphoid or mixed-lineage leukemia (trithor... HHIPL2 0.005 HHIP-like 2 AMPH 0.005 amphiphysin isoform 2 AMPH 0.005 amphiphysin isoform 1 HSPH1 0.005 heat shock 105kD DDX58 0.004 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide RIG-I [... COL11A1 0.004 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.004 alpha 1 type XI collagen isoform A preproprotein [Ho... DMP1 0.004 dentin matrix acidic phosphoprotein 1 isoform 1 precu... DMP1 0.004 dentin matrix acidic phosphoprotein 1 isoform 2 pre... KIAA1529 0.004 hypothetical protein LOC57653 AIM1 0.003 absent in melanoma 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.