TCF12 30228

Name: TCF12	Sequence: fasta or formatted (512aa)		NCBI GI: 46370086
Description: transcription factor 12 isoform c		Referenced in: Nuclear Receptors Helix-Loop-Helix Transcription Factors
Other entries for this name: alt prot [682aa] transcription factor 12 isoform b alt prot [706aa] transcription factor 12 isoform a alt prot [706aa] transcription factor 12 isoform a alt prot [682aa] transcription factor 12 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.1 26 2 C cysteine 0.6 3 1 D aspartate 4.9 25 2 E glutamate 5.5 28 3 F phenylalanine 1.6 8 2 G glycine 7.2 37 2 H histidine 4.3 22 1 I isoleucine 2.7 14 1 K lysine 3.7 19 1 L leucine 7.6 39 2 M methionine 2.9 15 1 N asparagine 5.9 30 2 P proline 8.2 42 2 Q glutamine 3.3 17 2 R arginine 5.1 26 2 S serine 17.4 89 3 T threonine 6.8 35 2 V valine 4.1 21 2 W tryptophan 0.4 2 1 Y tyrosine 2.7 14 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transcription factor 12 isoform c TCF12 0.949 transcription factor 12 isoform b TCF12 0.949 transcription factor 12 isoform b TCF12 0.936 transcription factor 12 isoform a TCF12 0.936 transcription factor 12 isoform a TCF4 0.582 transcription factor 4 isoform a TCF4 0.576 transcription factor 4 isoform b TCF3 0.408 transcription factor 3 isoform E12 TCF3 0.392 transcription factor 3 isoform E47 DSPP 0.033 dentin sialophosphoprotein preproprotein MUC6 0.029 mucin 6, gastric HECTD1 0.023 HECT domain containing 1 MED1 0.022 mediator complex subunit 1 MUC12 0.022 PREDICTED: mucin 12 POLR2A 0.020 DNA-directed RNA polymerase II A LOC100133790 0.020 PREDICTED: intestinal mucin-like, partial MEX3B 0.020 mex-3 homolog B MUC16 0.020 mucin 16 LOC100133714 0.019 PREDICTED: similar to Mucin-12, partial MUC12 0.019 PREDICTED: mucin 12, cell surface associated ADAMTS7 0.019 ADAM metallopeptidase with thrombospondin type 1 mot... MUC12 0.018 PREDICTED: mucin 12 POM121C 0.018 POM121 membrane glycoprotein (rat)-like ARID1B 0.018 AT rich interactive domain 1B (SWI1-like) isoform 2 ... ARID1B 0.018 AT rich interactive domain 1B (SWI1-like) isoform 1 ... ARID1B 0.018 AT rich interactive domain 1B (SWI1-like) isoform 3 ... LOC100288540 0.018 PREDICTED: hypothetical protein XP_002342775 CDSN 0.018 corneodesmosin precursor HRNR 0.017 hornerin NCOA3 0.017 nuclear receptor coactivator 3 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.