MED1 24815

Name: MED1	Sequence: fasta or formatted (1581aa)		NCBI GI: 28559039
Description: mediator complex subunit 1		Referenced in: Nuclear Receptors RNA Polymerase and General Transcription Factors Thyroid and Thyroid Hormone Receptor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.1 65 2 C cysteine 1.1 17 1 D aspartate 5.8 91 3 E glutamate 3.9 62 2 F phenylalanine 2.5 40 2 G glycine 7.9 125 2 H histidine 3.0 48 2 I isoleucine 3.9 62 3 K lysine 8.0 126 4 L leucine 7.3 115 2 M methionine 2.9 46 1 N asparagine 4.2 67 3 P proline 8.3 132 3 Q glutamine 4.0 64 2 R arginine 2.9 46 2 S serine 17.6 278 7 T threonine 6.2 98 3 V valine 4.4 69 2 W tryptophan 0.3 4 1 Y tyrosine 1.6 26 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 mediator complex subunit 1 DSPP 0.040 dentin sialophosphoprotein preproprotein MUC12 0.027 PREDICTED: mucin 12 HRNR 0.025 hornerin SRRM2 0.024 splicing coactivator subunit SRm300 MUC12 0.021 PREDICTED: mucin 12, cell surface associated LOC100170229 0.020 hypothetical protein LOC100170229 MUC21 0.020 mucin 21 FLG 0.019 filaggrin MUC12 0.019 PREDICTED: mucin 12 ZC3H18 0.019 zinc finger CCCH-type containing 18 NOLC1 0.018 nucleolar and coiled-body phosphoprotein 1 NKTR 0.017 natural killer-tumor recognition sequence FLG2 0.016 filaggrin family member 2 MLLT6 0.016 myeloid/lymphoid or mixed-lineage leukemia (trithora... TNRC18 0.016 trinucleotide repeat containing 18 LOC100133915 0.016 PREDICTED: hypothetical protein KIAA1853 0.015 KIAA1853 protein AFF4 0.015 ALL1 fused gene from 5q31 UBN1 0.015 ubinuclein 1 UBN1 0.015 ubinuclein 1 TRIP12 0.015 thyroid hormone receptor interactor 12 NAV3 0.015 neuron navigator 3 TCOF1 0.015 Treacher Collins-Franceschetti syndrome 1 isoform b ... MUC17 0.014 mucin 17 TCOF1 0.014 Treacher Collins-Franceschetti syndrome 1 isoform f... LOC100130716 0.014 PREDICTED: similar to mucin 11 MUC12 0.014 PREDICTED: mucin 12 TCOF1 0.014 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.014 Treacher Collins-Franceschetti syndrome 1 isoform a ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.