DDX58 24540

Name: DDX58	Sequence: fasta or formatted (925aa)		NCBI GI: 27881482
Description: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide RIG-I		Referenced in: DEAD / H Helicase Family RNases and RNA Stability
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 51 2 C cysteine 2.8 26 1 D aspartate 5.3 49 1 E glutamate 9.2 85 3 F phenylalanine 5.1 47 2 G glycine 4.3 40 2 H histidine 1.9 18 2 I isoleucine 7.6 70 3 K lysine 9.2 85 2 L leucine 9.4 87 3 M methionine 2.2 20 2 N asparagine 4.3 40 2 P proline 4.1 38 2 Q glutamine 5.1 47 2 R arginine 4.1 38 2 S serine 5.6 52 2 T threonine 5.0 46 2 V valine 5.0 46 2 W tryptophan 1.1 10 1 Y tyrosine 3.2 30 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide RIG-I [... IFIH1 0.192 interferon induced with helicase C domain 1 DHX58 0.154 RNA helicase LGP2 DICER1 0.048 dicer1 DICER1 0.048 dicer1 FANCM 0.040 Fanconi anemia, complementation group M ASCC3 0.011 activating signal cointegrator 1 complex subunit 3 i... DDX46 0.010 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 POLQ 0.010 DNA polymerase theta DDX23 0.010 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 DDX17 0.008 DEAD box polypeptide 17 isoform 3 DDX17 0.008 DEAD box polypeptide 17 isoform 1 EIF4A2 0.008 eukaryotic translation initiation factor 4A2 EIF4A1 0.008 eukaryotic translation initiation factor 4A isoform 1... SNRNP200 0.008 activating signal cointegrator 1 complex subunit 3-l... LOC652147 0.008 PREDICTED: similar to U5 snRNP-specific 200kD prote... GOLGA4 0.007 golgi autoantigen, golgin subfamily a, 4 DDX5 0.007 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 DDX53 0.006 DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 HFM1 0.006 HFM1 protein DDX43 0.006 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 MYH11 0.006 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.006 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.006 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.006 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... SMC4 0.006 SMC4 structural maintenance of chromosomes 4-like 1 ... SMC4 0.006 SMC4 structural maintenance of chromosomes 4-like 1 ... CHD2 0.006 chromodomain helicase DNA binding protein 2 isoform... DDX4 0.006 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3 ... DDX4 0.006 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 1 [... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.