Guide to the Human Genome
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Name: REV1 Sequence: fasta or formatted (1250aa) NCBI GI: 84043967
Description:

REV1-like isoform 2

Referenced in:

DNA Polymerases
Spindle, M phase, and Meiosis

Other entries for this name:
alt prot [1251aa] REV1-like isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         87           2
 C cysteine            1.7         21           1
 D aspartate           4.6         57           2
 E glutamate           6.4         80           3
 F phenylalanine       3.0         38           2
 G glycine             6.1         76           2
 H histidine           2.5         31           2
 I isoleucine          4.6         58           2
 K lysine              7.4         92           4
 L leucine             8.5        106           2
 M methionine          2.3         29           2
 N asparagine          5.3         66           2
 P proline             6.4         80           2
 Q glutamine           5.4         67           2
 R arginine            4.8         60           2
 S serine              9.1        114           2
 T threonine           5.8         72           2
 V valine              6.3         79           2
 W tryptophan          0.9         11           1
 Y tyrosine            2.1         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   REV1-like isoform 2 
REV1                  0.998   REV1-like isoform 1 
POLI                  0.030   DNA polymerase iota 
POLK                  0.029   DNA-directed DNA polymerase kappa 
POLH                  0.018   DNA-directed DNA polymerase eta 
HUWE1                 0.006   HECT, UBA and WWE domain containing 1 
ARHGEF18              0.005   Rho/Rac guanine nucleotide exchange factor 18 isofo...
ARHGEF18              0.005   Rho/Rac guanine nucleotide exchange factor 18 isofor...
KCNQ5                 0.005   potassium voltage-gated channel, KQT-like subfamily...
KCNQ5                 0.005   potassium voltage-gated channel, KQT-like subfamily...
KCNQ5                 0.005   potassium voltage-gated channel, KQT-like subfamily...
KCNQ5                 0.005   potassium voltage-gated channel, KQT-like subfamily...
KCNQ5                 0.005   potassium voltage-gated channel, KQT-like subfamily,...
TOPBP1                0.005   topoisomerase (DNA) II binding protein 1 
PCLO                  0.004   piccolo isoform 2 
PCLO                  0.004   piccolo isoform 1 
UTRN                  0.004   utrophin 
BRD4                  0.004   bromodomain-containing protein 4 isoform short 
BRD4                  0.004   bromodomain-containing protein 4 isoform long 
FRMPD3                0.004   PREDICTED: FERM and PDZ domain containing 3 
FRMPD3                0.004   PREDICTED: FERM and PDZ domain containing 3 
FRMPD3                0.004   PREDICTED: FERM and PDZ domain containing 3 
MUC16                 0.004   mucin 16 
MUC12                 0.004   PREDICTED: mucin 12 
LOC100133714          0.004   PREDICTED: similar to Mucin-12, partial 
MUC12                 0.004   PREDICTED: mucin 12 
LOC100288229          0.003   PREDICTED: hypothetical protein XP_002343606 
MUC6                  0.003   mucin 6, gastric 
LRCH2                 0.003   leucine-rich repeats and calponin homology (CH) dom...
MUC21                 0.003   mucin 21 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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