Guide to the Human Genome
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Name: HUWE1 Sequence: fasta or formatted (4374aa) NCBI GI: 61676188
Description:

HECT, UBA and WWE domain containing 1

Referenced in:

Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4        325           3
 C cysteine            1.6         69           2
 D aspartate           5.7        248           5
 E glutamate           8.2        357           7
 F phenylalanine       2.8        123           2
 G glycine             5.5        241           2
 H histidine           2.3         99           2
 I isoleucine          4.2        182           2
 K lysine              4.4        191           2
 L leucine            11.3        495           3
 M methionine          2.6        114           2
 N asparagine          3.2        140           2
 P proline             5.5        242           3
 Q glutamine           5.2        227           3
 R arginine            5.5        241           4
 S serine             10.0        437           4
 T threonine           7.0        307           5
 V valine              5.4        237           2
 W tryptophan          0.6         26           1
 Y tyrosine            1.7         73           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   HECT, UBA and WWE domain containing 1 
NEDD4L                0.037   neural precursor cell expressed, developmentally do...
NEDD4L                0.037   neural precursor cell expressed, developmentally dow...
NEDD4L                0.037   neural precursor cell expressed, developmentally do...
NEDD4L                0.037   neural precursor cell expressed, developmentally do...
NEDD4L                0.037   neural precursor cell expressed, developmentally do...
NEDD4L                0.037   neural precursor cell expressed, developmentally do...
NEDD4L                0.037   neural precursor cell expressed, developmentally do...
NEDD4L                0.037   neural precursor cell expressed, developmentally do...
NEDD4L                0.037   neural precursor cell expressed, developmentally do...
NEDD4                 0.037   neural precursor cell expressed, developmentally do...
NEDD4                 0.037   neural precursor cell expressed, developmentally do...
ITCH                  0.036   itchy homolog E3 ubiquitin protein ligase 
SMURF2                0.036   SMAD specific E3 ubiquitin protein ligase 2 
SMURF1                0.036   Smad ubiquitination regulatory factor 1 isoform 1 [H...
SMURF1                0.036   Smad ubiquitination regulatory factor 1 isoform 2 [H...
WWP1                  0.035   WW domain containing E3 ubiquitin protein ligase 1 [...
WWP2                  0.035   WW domain containing E3 ubiquitin protein ligase 2 i...
WWP2                  0.035   WW domain containing E3 ubiquitin protein ligase 2 i...
HECW2                 0.033   HECT, C2 and WW domain containing E3 ubiquitin prote...
HACE1                 0.033   HECT domain and ankyrin repeat containing, E3 ubiqu...
HECW1                 0.033   NEDD4-like ubiquitin-protein ligase 1 
KIAA0317              0.021   hypothetical protein LOC9870 
UBE3A                 0.021   ubiquitin protein ligase E3A isoform 3 
UBE3A                 0.021   ubiquitin protein ligase E3A isoform 1 
UBE3A                 0.021   ubiquitin protein ligase E3A isoform 2 
HECTD2                0.021   HECT domain containing 2 isoform a 
UBE3B                 0.019   ubiquitin protein ligase E3B 
UBE3B                 0.019   ubiquitin protein ligase E3B 
UBE3C                 0.019   ubiquitin protein ligase E3C 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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