SCN2A 37403

Name: SCN2A	Sequence: fasta or formatted (2005aa)		NCBI GI: 93141212
Description: sodium channel, voltage-gated, type II, alpha isoform 1		Referenced in: Sodium Channels
Other entries for this name: alt mRNA [2005aa] sodium channel, voltage-gated, type II, alpha isoform 1 alt prot [2005aa] sodium channel, voltage-gated, type II, alpha isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 112 6 C cysteine 1.9 38 2 D aspartate 5.1 103 3 E glutamate 7.0 140 3 F phenylalanine 7.1 142 3 G glycine 5.3 107 2 H histidine 0.9 19 1 I isoleucine 7.2 144 3 K lysine 6.6 132 4 L leucine 10.1 202 3 M methionine 3.5 71 2 N asparagine 4.9 99 2 P proline 3.7 74 2 Q glutamine 2.8 57 2 R arginine 4.2 84 2 S serine 7.9 159 3 T threonine 5.0 100 3 V valine 6.7 134 3 W tryptophan 1.4 28 2 Y tyrosine 3.0 60 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sodium channel, voltage-gated, type II, alpha isofor... SCN2A 1.000 sodium channel, voltage-gated, type II, alpha isofor... SCN2A 0.999 sodium channel, voltage-gated, type II, alpha isofor... SCN3A 0.872 sodium channel, voltage-gated, type III, alpha isof... SCN1A 0.870 sodium channel, voltage-gated, type I, alpha SCN3A 0.849 sodium channel, voltage-gated, type III, alpha isof... SCN3A 0.849 sodium channel, voltage-gated, type III, alpha isof... SCN9A 0.774 sodium channel, voltage-gated, type IX, alpha SCN8A 0.747 sodium channel, voltage gated, type VIII, alpha [Homo... SCN5A 0.606 voltage-gated sodium channel type V alpha isoform f... SCN5A 0.602 voltage-gated sodium channel type V alpha isoform b ... SCN5A 0.602 voltage-gated sodium channel type V alpha isoform a ... SCN5A 0.601 voltage-gated sodium channel type V alpha isoform c... SCN5A 0.589 voltage-gated sodium channel type V alpha isoform d... SCN5A 0.584 voltage-gated sodium channel type V alpha isoform e... SCN10A 0.527 sodium channel, voltage-gated, type X, alpha SCN4A 0.464 voltage-gated sodium channel type 4 alpha SCN7A 0.332 sodium channel, voltage-gated, type VII, alpha [Hom... SCN11A 0.321 sodium channel, voltage-gated, type XI, alpha [Homo... LOC100294386 0.250 PREDICTED: similar to sodium channel, voltage-gated... CACNA1D 0.101 calcium channel, voltage-dependent, L type, alpha 1... CACNA1D 0.099 calcium channel, voltage-dependent, L type, alpha 1... CACNA1D 0.099 calcium channel, voltage-dependent, L type, alpha 1D ... CACNA1I 0.079 calcium channel, voltage-dependent, T type, alpha 1I... CACNA1I 0.079 calcium channel, voltage-dependent, T type, alpha 1I... CACNA1H 0.079 calcium channel, voltage-dependent, T type, alpha 1H... CACNA1G 0.078 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.078 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.078 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.078 voltage-dependent calcium channel alpha 1G subunit i... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.