POLK 36012

Name: POLK	Sequence: fasta or formatted (870aa)		NCBI GI: 7705344
Description: DNA-directed DNA polymerase kappa		Referenced in: DNA Polymerases
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 46 2 C cysteine 2.5 22 1 D aspartate 5.2 45 2 E glutamate 8.3 72 2 F phenylalanine 4.4 38 2 G glycine 3.6 31 1 H histidine 2.2 19 1 I isoleucine 5.4 47 2 K lysine 9.7 84 3 L leucine 8.2 71 3 M methionine 2.8 24 2 N asparagine 5.7 50 2 P proline 4.1 36 2 Q glutamine 5.5 48 2 R arginine 4.7 41 2 S serine 9.7 84 3 T threonine 4.8 42 2 V valine 5.9 51 2 W tryptophan 0.3 3 1 Y tyrosine 1.8 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 DNA-directed DNA polymerase kappa POLI 0.060 DNA polymerase iota POLH 0.048 DNA-directed DNA polymerase eta REV1 0.042 REV1-like isoform 1 REV1 0.042 REV1-like isoform 2 TPM1 0.007 tropomyosin 1 alpha chain isoform 6 TPM1 0.006 tropomyosin 1 alpha chain isoform 2 TPM1 0.006 tropomyosin 1 alpha chain isoform 1 TPM1 0.006 tropomyosin 1 alpha chain isoform 3 LUZP1 0.006 leucine zipper protein 1 LUZP1 0.006 leucine zipper protein 1 RAD50 0.006 RAD50 homolog isoform 2 RAD50 0.006 RAD50 homolog isoform 1 GCC2 0.005 GRIP and coiled-coil domain-containing 2 FILIP1 0.005 filamin A interacting protein 1 CCDC110 0.005 coiled-coil domain containing 110 isoform b CCDC110 0.005 coiled-coil domain containing 110 isoform a C1orf124 0.005 hypothetical protein LOC83932 isoform a NIN 0.004 ninein isoform 4 NIN 0.004 ninein isoform 5 NIN 0.004 ninein isoform 1 NIN 0.004 ninein isoform 2 NEB 0.004 nebulin PRDM5 0.004 PR domain containing 5 PACSIN3 0.004 protein kinase C and casein kinase substrate in neur... MYH7B 0.004 myosin, heavy polypeptide 7B, cardiac muscle, beta ... FAM73B 0.004 hypothetical protein LOC84895 TPM3 0.004 tropomyosin 3 isoform 5 TPM3 0.004 tropomyosin 3 isoform 4 TPM3 0.004 tropomyosin 3 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.