TCF12 30227

Name: TCF12	Sequence: fasta or formatted (682aa)		NCBI GI: 46370084
Description: transcription factor 12 isoform b		Referenced in: Nuclear Receptors Helix-Loop-Helix Transcription Factors
Other entries for this name: alt mRNA [682aa] transcription factor 12 isoform b alt prot [706aa] transcription factor 12 isoform a alt prot [706aa] transcription factor 12 isoform a alt prot [512aa] transcription factor 12 isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.1 35 2 C cysteine 0.4 3 1 D aspartate 5.4 37 2 E glutamate 4.7 32 3 F phenylalanine 2.2 15 2 G glycine 8.1 55 2 H histidine 3.8 26 1 I isoleucine 2.3 16 1 K lysine 3.7 25 2 L leucine 8.4 57 2 M methionine 2.5 17 1 N asparagine 4.8 33 2 P proline 8.4 57 2 Q glutamine 3.8 26 3 R arginine 5.6 38 3 S serine 18.0 123 3 T threonine 6.9 47 2 V valine 3.4 23 2 W tryptophan 0.4 3 1 Y tyrosine 2.1 14 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transcription factor 12 isoform b TCF12 1.000 transcription factor 12 isoform b TCF12 0.990 transcription factor 12 isoform a TCF12 0.990 transcription factor 12 isoform a TCF12 0.712 transcription factor 12 isoform c TCF4 0.583 transcription factor 4 isoform a TCF4 0.578 transcription factor 4 isoform b TCF3 0.425 transcription factor 3 isoform E12 TCF3 0.413 transcription factor 3 isoform E47 DSPP 0.035 dentin sialophosphoprotein preproprotein MUC12 0.031 PREDICTED: mucin 12 MUC6 0.025 mucin 6, gastric LOC100133714 0.022 PREDICTED: similar to Mucin-12, partial MUC12 0.022 PREDICTED: mucin 12 POLR2A 0.021 DNA-directed RNA polymerase II A MUC12 0.020 PREDICTED: mucin 12, cell surface associated LOC100288540 0.019 PREDICTED: hypothetical protein XP_002342775 POM121C 0.019 POM121 membrane glycoprotein (rat)-like HRNR 0.018 hornerin MED1 0.016 mediator complex subunit 1 POM121 0.016 nuclear pore membrane protein 121 ARHGAP17 0.015 nadrin isoform 1 HECTD1 0.015 HECT domain containing 1 LOC100133790 0.015 PREDICTED: intestinal mucin-like, partial MEX3B 0.015 mex-3 homolog B LOC100133915 0.015 PREDICTED: hypothetical protein MUC16 0.014 mucin 16 LOC100130716 0.014 PREDICTED: similar to mucin 11 LOC100130716 0.014 PREDICTED: similar to Mucin-12 FLG 0.014 filaggrin Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.