Guide to the Human Genome
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Name: KIAA1529 Sequence: fasta or formatted (1646aa) NCBI GI: 55741661
Description:

hypothetical protein LOC57653

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         80           2
 C cysteine            1.5         25           1
 D aspartate           3.6         59           2
 E glutamate          12.5        206           7
 F phenylalanine       3.8         62           3
 G glycine             3.7         61           2
 H histidine           2.9         47           2
 I isoleucine          4.4         73           2
 K lysine              8.4        138           2
 L leucine            11.3        186           3
 M methionine          3.0         49           2
 N asparagine          3.8         62           1
 P proline             3.3         55           3
 Q glutamine           6.4        106           2
 R arginine            5.2         85           2
 S serine              7.7        127           3
 T threonine           5.1         84           2
 V valine              5.1         84           2
 W tryptophan          1.4         23           1
 Y tyrosine            2.1         34           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC57653 
WDR87                 0.018   NYD-SP11 protein 
LOC727832             0.016   golgi autoantigen, golgin subfamily a-like 
LOC283767             0.016   golgi autoantigen, golgin subfamily a-like 
LOC440243             0.016   PREDICTED: Putative golgin subfamily A member 6-lik...
MYH11                 0.015   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.015   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.015   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.015   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
LOC645202             0.014   PREDICTED: hypothetical protein LOC645202 
CLIP1                 0.014   restin isoform a 
NEFM                  0.014   neurofilament, medium polypeptide 150kDa isoform 1 ...
RPGR                  0.014   retinitis pigmentosa GTPase regulator isoform C [Hom...
MYT1                  0.014   myelin transcription factor 1 
CENPF                 0.014   centromere protein F 
LOC283685             0.014   PREDICTED: golgi autoantigen, golgin subfamily a-li...
MYH13                 0.014   myosin, heavy polypeptide 13, skeletal muscle [Homo...
GOLGB1                0.014   golgi autoantigen, golgin subfamily b, macrogolgin ...
CENPE                 0.013   centromere protein E 
LOC283685             0.013   PREDICTED: golgi autoantigen, golgin subfamily a-li...
ITSN2                 0.013   intersectin 2 isoform 3 
MYH9                  0.013   myosin, heavy polypeptide 9, non-muscle 
CDC2L2                0.013   cell division cycle 2-like 2 isoform 1 
TCHH                  0.013   trichohyalin 
GOLGA4                0.012   golgi autoantigen, golgin subfamily a, 4 
CLIP1                 0.012   restin isoform b 
MYO18A                0.012   myosin 18A isoform b 
MYO18A                0.012   myosin 18A isoform a 
CDC2L1                0.012   cell division cycle 2-like 1 (PITSLRE proteins) isof...
NEFM                  0.012   neurofilament, medium polypeptide 150kDa isoform 2 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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