TCF12 30225

Name: TCF12	Sequence: fasta or formatted (706aa)		NCBI GI: 46370080
Description: transcription factor 12 isoform a		Referenced in: Nuclear Receptors Helix-Loop-Helix Transcription Factors
Other entries for this name: alt prot [682aa] transcription factor 12 isoform b alt mRNA [706aa] transcription factor 12 isoform a alt prot [682aa] transcription factor 12 isoform b alt prot [512aa] transcription factor 12 isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.1 36 2 C cysteine 0.6 4 1 D aspartate 5.5 39 2 E glutamate 5.0 35 3 F phenylalanine 2.3 16 2 G glycine 7.8 55 2 H histidine 4.0 28 1 I isoleucine 2.3 16 1 K lysine 3.8 27 2 L leucine 8.5 60 2 M methionine 2.5 18 1 N asparagine 4.8 34 2 P proline 8.1 57 2 Q glutamine 4.1 29 3 R arginine 5.5 39 3 S serine 17.6 124 3 T threonine 6.7 47 2 V valine 3.5 25 2 W tryptophan 0.4 3 1 Y tyrosine 2.0 14 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transcription factor 12 isoform a TCF12 1.000 transcription factor 12 isoform a TCF12 0.956 transcription factor 12 isoform b TCF12 0.956 transcription factor 12 isoform b TCF12 0.677 transcription factor 12 isoform c TCF4 0.552 transcription factor 4 isoform a TCF4 0.548 transcription factor 4 isoform b TCF3 0.402 transcription factor 3 isoform E12 TCF3 0.391 transcription factor 3 isoform E47 DSPP 0.031 dentin sialophosphoprotein preproprotein MUC12 0.027 PREDICTED: mucin 12 MUC12 0.027 PREDICTED: mucin 12, cell surface associated MUC12 0.022 PREDICTED: mucin 12 MUC6 0.021 mucin 6, gastric LOC100133714 0.021 PREDICTED: similar to Mucin-12, partial POLR2A 0.020 DNA-directed RNA polymerase II A HECTD1 0.017 HECT domain containing 1 FLG 0.016 filaggrin LOC100288540 0.016 PREDICTED: hypothetical protein XP_002342775 POM121C 0.016 POM121 membrane glycoprotein (rat)-like ARID1B 0.015 AT rich interactive domain 1B (SWI1-like) isoform 1 ... POM121 0.015 nuclear pore membrane protein 121 MLLT10 0.014 myeloid/lymphoid or mixed-lineage leukemia transloca... MUC16 0.014 mucin 16 LOC100133915 0.014 PREDICTED: hypothetical protein LOC100130716 0.014 PREDICTED: similar to mucin 11 LOC100130716 0.014 PREDICTED: similar to Mucin-12 ADAMTS7 0.014 ADAM metallopeptidase with thrombospondin type 1 mot... LOC100133761 0.013 PREDICTED: similar to Mucin-6, partial HRNR 0.013 hornerin Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.