Guide to the Human Genome
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Name: HEPACAM Sequence: fasta or formatted (416aa) NCBI GI: 121674801
Description:

hepatocyte cell adhesion molecule

Referenced in:

Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         22           1
 C cysteine            1.0          4           1
 D aspartate           5.5         23           3
 E glutamate           6.2         26           2
 F phenylalanine       1.2          5           1
 G glycine             5.5         23           2
 H histidine           1.0          4           1
 I isoleucine          5.0         21           2
 K lysine              5.0         21           2
 L leucine            10.8         45           3
 M methionine          1.4          6           1
 N asparagine          2.6         11           1
 P proline             8.7         36           2
 Q glutamine           3.1         13           1
 R arginine            8.7         36           2
 S serine             10.8         45           2
 T threonine           7.5         31           2
 V valine              7.0         29           2
 W tryptophan          0.7          3           1
 Y tyrosine            2.9         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hepatocyte cell adhesion molecule 
HEPACAM2              0.104   HEPACAM family member 2 isoform 2 
HEPACAM2              0.103   HEPACAM family member 2 isoform 1 
CEACAM21              0.066   carcinoembryonic antigen-related cell adhesion molec...
CEACAM21              0.063   carcinoembryonic antigen-related cell adhesion mole...
CD2                   0.061   CD2 molecule 
VSIG2                 0.055   V-set and immunoglobulin domain containing 2 
CD84                  0.054   CD84 molecule 
GPA33                 0.053   transmembrane glycoprotein A33 precursor 
VSIG1                 0.053   V-set and immunoglobulin domain containing 1 
CD276                 0.050   CD276 antigen isoform a 
LRIG1                 0.049   leucine-rich repeats and immunoglobulin-like domains...
CEACAM6               0.048   carcinoembryonic antigen-related cell adhesion molec...
CEACAM16              0.048   carcinoembryonic antigen-related cell adhesion molec...
PSG8                  0.048   pregnancy specific beta-1-glycoprotein 8 isoform b ...
PSG8                  0.048   pregnancy specific beta-1-glycoprotein 8 isoform a [...
CD276                 0.046   CD276 antigen isoform b 
F11R                  0.046   F11 receptor precursor 
PSG1                  0.046   pregnancy specific beta-1-glycoprotein 1 
CEACAM1               0.046   carcinoembryonic antigen-related cell adhesion molec...
PSG4                  0.046   pregnancy specific beta-1-glycoprotein 4 isoform 1 [...
CEACAM1               0.045   carcinoembryonic antigen-related cell adhesion molec...
PSG6                  0.045   pregnancy specific beta-1-glycoprotein 6 isoform a [H...
PSG6                  0.045   pregnancy specific beta-1-glycoprotein 6 isoform b [...
PSG4                  0.045   pregnancy specific beta-1-glycoprotein 4 isoform 2 [...
CXADR                 0.045   coxsackie virus and adenovirus receptor precursor [Ho...
CEACAM7               0.045   carcinoembryonic antigen-related cell adhesion molecu...
CEACAM8               0.044   carcinoembryonic antigen-related cell adhesion molec...
NCAM1                 0.044   neural cell adhesion molecule 1 isoform 1 
NCAM1                 0.044   neural cell adhesion molecule 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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