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Search of human proteins with 14269578
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14269578 metallothionein 4 [Homo sapiens]
(62 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14269578 metallothionein 4 [Homo sapiens] 159 3e-40
gi|83367075 metallothionein 1E [Homo sapiens] 107 3e-24
gi|10835085 metallothionein 1H [Homo sapiens] 106 4e-24
gi|5174764 metallothionein 2A [Homo sapiens] 106 5e-24
gi|71274113 metallothionein 1A [Homo sapiens] 104 2e-23
gi|10835230 metallothionein 1G [Homo sapiens] 104 2e-23
gi|10835232 metallothionein 1X [Homo sapiens] 103 2e-23
gi|27414495 metallothionein 1B [Homo sapiens] 103 4e-23
gi|28866947 metallothionein 1F [Homo sapiens] 102 7e-23
gi|5174762 metallothionein 3 [Homo sapiens] 102 9e-23
gi|28866966 metallothionein 1M [Homo sapiens] 97 2e-21
gi|60593036 keratin associated protein 5-3 [Homo sapiens] 47 3e-06
gi|13994372 keratin associated protein 17-1 [Homo sapiens] 47 4e-06
gi|123702038 keratin associated protein 5-9 [Homo sapiens] 46 6e-06
gi|123173777 keratin associated protein 5-8 [Homo sapiens] 45 1e-05
gi|60099478 keratin associated protein 5-6 [Homo sapiens] 44 3e-05
gi|60279697 keratin associated protein 5-7 [Homo sapiens] 44 4e-05
gi|122891874 keratin associated protein 5-5 [Homo sapiens] 42 1e-04
gi|60593040 keratin associated protein 5-10 [Homo sapiens] 41 2e-04
gi|154146260 keratin associated protein 4-3 [Homo sapiens] 40 3e-04
gi|51972220 keratin associated protein 5-2 [Homo sapiens] 40 3e-04
gi|114431244 von Willebrand factor C and EGF domains [Homo sapiens] 40 5e-04
gi|239756792 PREDICTED: hypothetical protein [Homo sapiens] 39 7e-04
gi|239751312 PREDICTED: hypothetical protein [Homo sapiens] 39 7e-04
gi|239745809 PREDICTED: hypothetical protein [Homo sapiens] 39 7e-04
gi|14210534 keratin associated protein 4.4 [Homo sapiens] 39 7e-04
gi|13994129 keratin associated protein 4-12 [Homo sapiens] 39 9e-04
gi|54400749 keratin associated protein 5-1 [Homo sapiens] 39 9e-04
gi|238859649 keratin associated protein 10-8 [Homo sapiens] 39 0.001
gi|169212012 PREDICTED: keratin-associated protein 9-2-like 1-li... 39 0.001
>gi|14269578 metallothionein 4 [Homo sapiens]
Length = 62
Score = 159 bits (403), Expect = 3e-40
Identities = 62/62 (100%), Positives = 62/62 (100%)
Query: 1 MDPRECVCMSGGICMCGDNCKCTTCNCKTCRKSCCPCCPPGCAKCARGCICKGGSDKCSC 60
MDPRECVCMSGGICMCGDNCKCTTCNCKTCRKSCCPCCPPGCAKCARGCICKGGSDKCSC
Sbjct: 1 MDPRECVCMSGGICMCGDNCKCTTCNCKTCRKSCCPCCPPGCAKCARGCICKGGSDKCSC 60
Query: 61 CP 62
CP
Sbjct: 61 CP 62
>gi|83367075 metallothionein 1E [Homo sapiens]
Length = 61
Score = 107 bits (266), Expect = 3e-24
Identities = 39/61 (63%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 1 MDPRECVCMSGGICMCGDNCKCTTCNCKTCRKSCCPCCPPGCAKCARGCICKGGSDKCSC 60
MDP C C +GG C C +CKC C C +C+KSCC CCP GCAKCA+GC+CKG S+KCSC
Sbjct: 1 MDPN-CSCATGGSCTCAGSCKCKECKCTSCKKSCCSCCPVGCAKCAQGCVCKGASEKCSC 59
Query: 61 C 61
C
Sbjct: 60 C 60
>gi|10835085 metallothionein 1H [Homo sapiens]
Length = 61
Score = 106 bits (265), Expect = 4e-24
Identities = 40/61 (65%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 1 MDPRECVCMSGGICMCGDNCKCTTCNCKTCRKSCCPCCPPGCAKCARGCICKGGSDKCSC 60
MDP C C +GG C C +CKC C C +C+KSCC CCP GCAKCA+GCICKG S+KCSC
Sbjct: 1 MDPN-CSCEAGGSCACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCICKGASEKCSC 59
Query: 61 C 61
C
Sbjct: 60 C 60
>gi|5174764 metallothionein 2A [Homo sapiens]
Length = 61
Score = 106 bits (264), Expect = 5e-24
Identities = 40/61 (65%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 1 MDPRECVCMSGGICMCGDNCKCTTCNCKTCRKSCCPCCPPGCAKCARGCICKGGSDKCSC 60
MDP C C +G C C +CKC C C +C+KSCC CCP GCAKCA+GCICKG SDKCSC
Sbjct: 1 MDPN-CSCAAGDSCTCAGSCKCKECKCTSCKKSCCSCCPVGCAKCAQGCICKGASDKCSC 59
Query: 61 C 61
C
Sbjct: 60 C 60
>gi|71274113 metallothionein 1A [Homo sapiens]
Length = 61
Score = 104 bits (259), Expect = 2e-23
Identities = 39/61 (63%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 1 MDPRECVCMSGGICMCGDNCKCTTCNCKTCRKSCCPCCPPGCAKCARGCICKGGSDKCSC 60
MDP C C +GG C C +CKC C C +C+KSCC CCP CAKCA+GCICKG S+KCSC
Sbjct: 1 MDPN-CSCATGGSCTCTGSCKCKECKCTSCKKSCCSCCPMSCAKCAQGCICKGASEKCSC 59
Query: 61 C 61
C
Sbjct: 60 C 60
>gi|10835230 metallothionein 1G [Homo sapiens]
Length = 61
Score = 104 bits (259), Expect = 2e-23
Identities = 39/61 (63%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 1 MDPRECVCMSGGICMCGDNCKCTTCNCKTCRKSCCPCCPPGCAKCARGCICKGGSDKCSC 60
MDP C C +G C C +CKC C C +C+KSCC CCP GCAKCA+GCICKG S+KCSC
Sbjct: 1 MDPN-CSCAAGVSCTCASSCKCKECKCTSCKKSCCSCCPVGCAKCAQGCICKGASEKCSC 59
Query: 61 C 61
C
Sbjct: 60 C 60
>gi|10835232 metallothionein 1X [Homo sapiens]
Length = 61
Score = 103 bits (258), Expect = 2e-23
Identities = 40/61 (65%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 1 MDPRECVCMSGGICMCGDNCKCTTCNCKTCRKSCCPCCPPGCAKCARGCICKGGSDKCSC 60
MDP C C G C C +CKC C C +C+KSCC CCP GCAKCA+GCICKG SDKCSC
Sbjct: 1 MDPN-CSCSPVGSCACAGSCKCKECKCTSCKKSCCSCCPVGCAKCAQGCICKGTSDKCSC 59
Query: 61 C 61
C
Sbjct: 60 C 60
>gi|27414495 metallothionein 1B [Homo sapiens]
Length = 61
Score = 103 bits (256), Expect = 4e-23
Identities = 37/61 (60%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 1 MDPRECVCMSGGICMCGDNCKCTTCNCKTCRKSCCPCCPPGCAKCARGCICKGGSDKCSC 60
MDP C C +GG C C +CKC C C +C+K CC CCP GCAKCA+GC+CKG S+KC C
Sbjct: 1 MDPN-CSCTTGGSCACAGSCKCKECKCTSCKKCCCSCCPVGCAKCAQGCVCKGSSEKCRC 59
Query: 61 C 61
C
Sbjct: 60 C 60
>gi|28866947 metallothionein 1F [Homo sapiens]
Length = 61
Score = 102 bits (254), Expect = 7e-23
Identities = 37/61 (60%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 1 MDPRECVCMSGGICMCGDNCKCTTCNCKTCRKSCCPCCPPGCAKCARGCICKGGSDKCSC 60
MDP C C +G C C +CKC C C +C+KSCC CCP GC+KCA+GC+CKG S+KCSC
Sbjct: 1 MDPN-CSCAAGVSCTCAGSCKCKECKCTSCKKSCCSCCPVGCSKCAQGCVCKGASEKCSC 59
Query: 61 C 61
C
Sbjct: 60 C 60
>gi|5174762 metallothionein 3 [Homo sapiens]
Length = 68
Score = 102 bits (253), Expect = 9e-23
Identities = 38/67 (56%), Positives = 45/67 (67%), Gaps = 6/67 (8%)
Query: 1 MDPRECVCMSGGICMCGDNCKCTTCNCKTCRKSCCPCCPPGCAKCARGCICKGG------ 54
MDP C C SGG C C D+CKC C C +C+KSCC CCP C KCA+ C+CKGG
Sbjct: 1 MDPETCPCPSGGSCTCADSCKCEGCKCTSCKKSCCSCCPAECEKCAKDCVCKGGEAAEAE 60
Query: 55 SDKCSCC 61
++KCSCC
Sbjct: 61 AEKCSCC 67
>gi|28866966 metallothionein 1M [Homo sapiens]
Length = 61
Score = 97.4 bits (241), Expect = 2e-21
Identities = 36/61 (59%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 1 MDPRECVCMSGGICMCGDNCKCTTCNCKTCRKSCCPCCPPGCAKCARGCICKGGSDKCSC 60
MDP C C +G C C +CKC C C +C+KSCC CCP GCAKCA GC+CKG + CSC
Sbjct: 1 MDPN-CSCTTGVSCACTGSCKCKECKCTSCKKSCCSCCPVGCAKCAHGCVCKGTLENCSC 59
Query: 61 C 61
C
Sbjct: 60 C 60
>gi|60593036 keratin associated protein 5-3 [Homo sapiens]
Length = 238
Score = 47.4 bits (111), Expect = 3e-06
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 10/63 (15%)
Query: 4 RECVCMSGGICMCGDNCKCTTCNCKTC--RKSCCP--CCPPGC-AKCARGCICKGGSDKC 58
+ C C SG CG +C ++C CK C + SCC CC GC + C + CK S +
Sbjct: 172 KPCCCSSG----CGSSCCQSSC-CKPCCSQSSCCKPCCCSSGCGSSCCQSSCCKPCSSQS 226
Query: 59 SCC 61
SCC
Sbjct: 227 SCC 229
Score = 43.9 bits (102), Expect = 3e-05
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 10/68 (14%)
Query: 4 RECVCMSG-GICMCGDNCKCTTCNCKTCRKSCCP--------CCPPGC-AKCARGCICKG 53
+ C C SG G C +C +C+ +C K CC CC GC + C + CK
Sbjct: 133 KPCCCSSGCGSSCCQSSCCKPSCSQSSCCKPCCSQSSCCKPCCCSSGCGSSCCQSSCCKP 192
Query: 54 GSDKCSCC 61
+ SCC
Sbjct: 193 CCSQSSCC 200
Score = 42.7 bits (99), Expect = 6e-05
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
Query: 5 ECVCMSGGICMCGDNCKCTTCNCKTCRKSCCP--CCPPGCAK--CARGCICKGGSDKCSC 60
+C C C C C + C C+ SC CC P C++ C + C C G SC
Sbjct: 128 QCSCYKP--CCCSSGCGSSCCQSSCCKPSCSQSSCCKPCCSQSSCCKPCCCSSGCGS-SC 184
Query: 61 C 61
C
Sbjct: 185 C 185
Score = 37.7 bits (86), Expect = 0.002
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 7/57 (12%)
Query: 10 SGGIC--MCGDNCKCTTCNCK--TCRKSCCPCCPPGC-AKCARGCICKGGSDKCSCC 61
S G+C G C +C C +C K C CC GC + C + CK + SCC
Sbjct: 107 SKGVCGFRGGSKGGCGSCGCSQCSCYKPC--CCSSGCGSSCCQSSCCKPSCSQSSCC 161
Score = 37.0 bits (84), Expect = 0.003
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 6/59 (10%)
Query: 7 VCMSGGICMCGDNCKCTTC-NCKTCRKSCCPC--CPPGCAKCARGCICKGGSDKCSCCP 62
VC +C C C C++C +C + C C C GC C KGG C P
Sbjct: 39 VCCCKPVCCCVPACSCSSCGSCGGSKGVCGSCGGCKGGCGSCGGS---KGGCGSSCCVP 94
Score = 34.3 bits (77), Expect = 0.022
Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 22/76 (28%)
Query: 6 CVCMSGGIC-----MCGD--NCK--CTTCNCKT--CRKSCCP--CCPPGCAKC--ARGCI 50
C C S G C +CG CK C +C C SCC CC C C ++G +
Sbjct: 52 CSCSSCGSCGGSKGVCGSCGGCKGGCGSCGGSKGGCGSSCCVPVCCSSSCGSCGGSKG-V 110
Query: 51 C------KGGSDKCSC 60
C KGG C C
Sbjct: 111 CGFRGGSKGGCGSCGC 126
Score = 34.3 bits (77), Expect = 0.022
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Query: 4 RECVCMSGGICMCGDNCKCTTCNCKTCRKSCCPCCPPGCAKC 45
+ C C SG CG +C ++C CK C S CC P C +C
Sbjct: 201 KPCCCSSG----CGSSCCQSSC-CKPC-SSQSSCCVPICCQC 236
Score = 31.2 bits (69), Expect = 0.19
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 8/57 (14%)
Query: 6 CVCMSGGICMCGDNCKCTTCNCK-TCRKSCCPCCPPGCAKCARGCICKGGSDKCSCC 61
C G CG C C CK C CC P C+ C+ C G C C
Sbjct: 21 CGGCGSGYGGCGSGCCVPVCCCKPVC------CCVPACS-CSSCGSCGGSKGVCGSC 70
Score = 29.3 bits (64), Expect = 0.71
Identities = 18/59 (30%), Positives = 19/59 (32%), Gaps = 9/59 (15%)
Query: 12 GICMCGDNCKCTTCNCKTCRKSCCPCCPPGCAKCARGCICKGGSDKC---------SCC 61
G C+ CK C C S C C C CKGG C SCC
Sbjct: 34 GCCVPVCCCKPVCCCVPACSCSSCGSCGGSKGVCGSCGGCKGGCGSCGGSKGGCGSSCC 92
>gi|13994372 keratin associated protein 17-1 [Homo sapiens]
Length = 105
Score = 46.6 bits (109), Expect = 4e-06
Identities = 24/61 (39%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Query: 5 ECVCMSGGICMCGDNCKC--TTCNCKTCRKSCC--PCCPPGCAKCARGCICKGGSDKCSC 60
EC C G CG C C + C C SCC CC GC C C GG SC
Sbjct: 21 ECCCQPGCCGCCGSCCGCGGSGCGGSGCGGSCCGSSCCGSGCGGCGGCGGCGGGCCGSSC 80
Query: 61 C 61
C
Sbjct: 81 C 81
Score = 33.9 bits (76), Expect = 0.029
Identities = 21/54 (38%), Positives = 23/54 (42%), Gaps = 9/54 (16%)
Query: 14 CMCGDNCKCTTCNCKTCRKSCCPCCPPGCAKCARGCICKGGS----DKC--SCC 61
C GD C T + C + C CC PGC C C GGS C SCC
Sbjct: 3 CCPGDCFTCCTQE-QNCCEEC--CCQPGCCGCCGSCCGCGGSGCGGSGCGGSCC 53
Score = 31.2 bits (69), Expect = 0.19
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 5/46 (10%)
Query: 16 CGDNCKCTTCNCKTCRKSCCPCCPPGCAKCARGCICKGGSDKCSCC 61
C + C C C C SCC C GC G C G SCC
Sbjct: 18 CCEECCCQP-GCCGCCGSCCGCGGSGCG----GSGCGGSCCGSSCC 58
Score = 30.4 bits (67), Expect = 0.32
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 9/45 (20%)
Query: 11 GGICMCGDNCKCTTCN----CKTCRKSCC--PCCPPGCAKCARGC 49
GG C CG +C + C C C CC CC C C GC
Sbjct: 49 GGSC-CGSSCCGSGCGGCGGCGGCGGGCCGSSCCGSSC--CGSGC 90
Score = 29.6 bits (65), Expect = 0.54
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 6/44 (13%)
Query: 11 GGICMCGDNCKCTTCNCKTCRKSCC--PCCPPGCAKCARGCICK 52
GG CG C C C SCC CC P C + C K
Sbjct: 66 GGCGGCGGGC----CGSSCCGSSCCGSGCCGPVCCQPTPICDTK 105
>gi|123702038 keratin associated protein 5-9 [Homo sapiens]
Length = 169
Score = 46.2 bits (108), Expect = 6e-06
Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Query: 5 ECVCMSGGICMCGDNCKCTTCNCKTCRKSC--CPCCPPGCAKCARGCICKGGSDKCSCC 61
+C C C C C + C C C+ C C CC P C+ RG C S CC
Sbjct: 79 QCSCCKP--CCCSSGCGSSCCQCSCCKPYCSQCSCCKPCCSSSGRGSSCCQSSCCKPCC 135
Score = 43.9 bits (102), Expect = 3e-05
Identities = 24/63 (38%), Positives = 28/63 (44%), Gaps = 9/63 (14%)
Query: 6 CVCMSGGICMCGD----NCKCTTCNCKTCRKSCCP--CCPPGC-AKCARGCICKGGSDKC 58
C C S G CG C +C C C SCC CC GC + C + CK +C
Sbjct: 52 CSCSSCGKRGCGSCGGSKGGCGSCGCSQC--SCCKPCCCSSGCGSSCCQCSCCKPYCSQC 109
Query: 59 SCC 61
SCC
Sbjct: 110 SCC 112
Score = 39.3 bits (90), Expect = 7e-04
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 6/55 (10%)
Query: 12 GICMCGDNCKCTTCNCKT-CRKSC--CPCCPPGCAKCA--RGCICKGGSDKCSCC 61
G C C C C C + C SC C CC P C++C+ + C C SCC
Sbjct: 73 GSCGCSQCSCCKPCCCSSGCGSSCCQCSCCKPYCSQCSCCKPC-CSSSGRGSSCC 126
Score = 37.7 bits (86), Expect = 0.002
Identities = 26/82 (31%), Positives = 30/82 (36%), Gaps = 32/82 (39%)
Query: 12 GICMCGDNC---------KCTTC--NCKTCRKSCCP---CCPP--------GCAKCA-RG 48
G C C C C +C C+ C SCC CC P C+ C RG
Sbjct: 2 GCCGCSGGCGSSCGGCDSSCGSCGSGCRGCGPSCCAPVYCCKPVCCCVPACSCSSCGKRG 61
Query: 49 CICKGGS---------DKCSCC 61
C GGS +CSCC
Sbjct: 62 CGSCGGSKGGCGSCGCSQCSCC 83
Score = 31.6 bits (70), Expect = 0.14
Identities = 21/82 (25%), Positives = 28/82 (34%), Gaps = 29/82 (35%)
Query: 4 RECVCMSGGICMCGDNC--------KCTTCNC----------------KTCRKSCCPCCP 39
+ C C SG CG +C C+ C+C +C K CC
Sbjct: 84 KPCCCSSG----CGSSCCQCSCCKPYCSQCSCCKPCCSSSGRGSSCCQSSCCKPCCSSSG 139
Query: 40 PGCAKCARGCICKGGSDKCSCC 61
G + C C CK + CC
Sbjct: 140 CGSSCCQSSC-CKPCCSQSRCC 160
>gi|123173777 keratin associated protein 5-8 [Homo sapiens]
Length = 187
Score = 45.1 bits (105), Expect = 1e-05
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 10/63 (15%)
Query: 4 RECVCMSGGICMCGDNCKCTTCNCKTC--RKSCCP--CCPPGC-AKCARGCICKGGSDKC 58
+ C C SG CG +C ++C CK C + SCC CC GC + C + CK +
Sbjct: 121 KPCSCSSG----CGSSCCQSSC-CKPCCSQSSCCKPCCCSSGCGSSCCQSSCCKPCCSQS 175
Query: 59 SCC 61
SCC
Sbjct: 176 SCC 178
Score = 44.3 bits (103), Expect = 2e-05
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 10/63 (15%)
Query: 4 RECVCMSGGICMCGDNCKCTTCNCKTC--RKSCC-PC-CPPGC-AKCARGCICKGGSDKC 58
+ C C SG CG +C ++C CK C + SCC PC C GC + C + CK +
Sbjct: 92 KPCCCSSG----CGSSCCQSSC-CKPCCSQSSCCKPCSCSSGCGSSCCQSSCCKPCCSQS 146
Query: 59 SCC 61
SCC
Sbjct: 147 SCC 149
Score = 37.0 bits (84), Expect = 0.003
Identities = 23/65 (35%), Positives = 23/65 (35%), Gaps = 16/65 (24%)
Query: 6 CVCMSGGICMCGDNCKCTTCNCKTCRKSCCP---CCPPGCAKCARGCIC---------KG 53
C SGG CG C C C SCC CC P C C C C KG
Sbjct: 3 CCGCSGG---CGSGCGGCGSGCGGCGSSCCVPICCCKPVCC-CVPACSCSSCGSCGGSKG 58
Query: 54 GSDKC 58
G C
Sbjct: 59 GRGSC 63
Score = 37.0 bits (84), Expect = 0.003
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
Query: 5 ECVCMSGGICMCGDNCKCTTCNCKTCRKSCCPCCPPGC-AKCARGCICKGGSDKCSCC 61
+C G CG +C C+ C+C K C CC GC + C + CK + SCC
Sbjct: 69 DCGSCGGSKGGCG-SCGCSQCSC---YKPC--CCSSGCGSSCCQSSCCKPCCSQSSCC 120
Score = 33.1 bits (74), Expect = 0.049
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Query: 4 RECVCMSGGICMCGDNCKCTTCNCKTCRKSCCPCCPPGCAKC 45
+ C C SG CG +C ++C CK C S CC P C +C
Sbjct: 150 KPCCCSSG----CGSSCCQSSC-CKPCC-SQSSCCVPICCQC 185
Score = 27.7 bits (60), Expect = 2.1
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Query: 8 CMSGGICMCGDNCKCTTCNCKTCRKSCCPCCPPGCAKCARGCICKGGSDKCSCC 61
C G C C C C SC C G +K RG C G C C
Sbjct: 21 CGGCGSSCCVPICCCKPVCCCVPACSCSSCGSCGGSKGGRGS-CGGSKGDCGSC 73
>gi|60099478 keratin associated protein 5-6 [Homo sapiens]
Length = 129
Score = 43.9 bits (102), Expect = 3e-05
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Query: 7 VCMSGGICMCGDNCKCTTCNCKTCRKSCCPCC---PPGCAKC--ARGCICKGGSDKCSCC 61
+C +C C C CT+C K CC C GC C ++G G +CSCC
Sbjct: 32 ICCCKPVCCCVPACSCTSCGSCGGSKGCCGSCGGSKGGCGSCGGSKGGCGSCGCSQCSCC 91
Score = 37.4 bits (85), Expect = 0.003
Identities = 23/61 (37%), Positives = 23/61 (37%), Gaps = 12/61 (19%)
Query: 6 CVCMSGGICMCGDNCKCTTCNCKTCRKSCCP---CCPPGCAKCARGCICK-----GGSDK 57
C SGG CG C C C SCC CC P C C C C GGS
Sbjct: 3 CCGCSGG---CGSGCGGCGSGCGGCGSSCCVPICCCKPVCC-CVPACSCTSCGSCGGSKG 58
Query: 58 C 58
C
Sbjct: 59 C 59
Score = 33.5 bits (75), Expect = 0.038
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 8/40 (20%)
Query: 14 CMCGDNCKCTT-CNCKTCRKSCCP-------CCPPGCAKC 45
C C C C++ C C+ SCC CC P C +C
Sbjct: 88 CSCCKPCYCSSGCGSSCCQSSCCKPCCSQASCCVPICCQC 127
Score = 32.3 bits (72), Expect = 0.084
Identities = 18/60 (30%), Positives = 21/60 (35%), Gaps = 4/60 (6%)
Query: 6 CVCMSGGICMCGDNCKCTTCNCK--TCRKSCCPCCPPGCAKCARGCI--CKGGSDKCSCC 61
C G CG +C C CK C C C G ++GC C G C C
Sbjct: 14 CGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCTSCGSCGGSKGCCGSCGGSKGGCGSC 73
Score = 25.8 bits (55), Expect = 7.9
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 12/41 (29%)
Query: 4 RECVCMSGGICMCGDNCKCTTCNCKTCRK-------SCCPC 37
+ C C SG CG +C ++C CK C CC C
Sbjct: 92 KPCYCSSG----CGSSCCQSSC-CKPCCSQASCCVPICCQC 127
>gi|60279697 keratin associated protein 5-7 [Homo sapiens]
Length = 165
Score = 43.5 bits (101), Expect = 4e-05
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 10/63 (15%)
Query: 4 RECVCMSGGICMCGDNCKCTTCNCK--TCRKSCCP--CCPPGC-AKCARGCICKGGSDKC 58
+ C C SG CG +C C + CK C+ SCC CC GC + C + C +
Sbjct: 99 KPCCCSSG----CGSSC-CQSSCCKPCCCQSSCCKPCCCSSGCGSSCCQSSCCNPCCSQS 153
Query: 59 SCC 61
SCC
Sbjct: 154 SCC 156
Score = 36.6 bits (83), Expect = 0.004
Identities = 23/68 (33%), Positives = 23/68 (33%), Gaps = 16/68 (23%)
Query: 6 CVCMSG---GICMCGDNCKCTTCNCKTCRKSCCP---CCPPGCAKCARGCIC-------- 51
C C G G CG C C C SCC CC P C C C C
Sbjct: 4 CGCSEGCGSGCGGCGSGCGGCGSGCGGCGSSCCVPVCCCKPVCC-CVPACSCSSCGSCGG 62
Query: 52 -KGGSDKC 58
KGG C
Sbjct: 63 SKGGCGSC 70
Score = 35.8 bits (81), Expect = 0.008
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 6/57 (10%)
Query: 7 VCMSGGICMCGDNCKCTTC-NCKTCRKSCCPC--CPPGCAKCARGCICKGGSDKCSC 60
VC +C C C C++C +C + C C GC C KGG C C
Sbjct: 39 VCCCKPVCCCVPACSCSSCGSCGGSKGGCGSCGGSKGGCGSCGGS---KGGCGSCGC 92
Score = 33.5 bits (75), Expect = 0.038
Identities = 14/46 (30%), Positives = 17/46 (36%), Gaps = 4/46 (8%)
Query: 4 RECVCMSGGI--CMCGDNCKCTTCNCKTCRKSCCP--CCPPGCAKC 45
+ C C S C C C + C C C CC P C +C
Sbjct: 118 KPCCCQSSCCKPCCCSSGCGSSCCQSSCCNPCCSQSSCCVPVCCQC 163
Score = 29.6 bits (65), Expect = 0.54
Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 3/38 (7%)
Query: 25 CNCKTCRKSCCPCCPPGCAKCARGCICKGGSDKCSCCP 62
C C S C C GC C GC GG C P
Sbjct: 4 CGCSEGCGSGCGGCGSGCGGCGSGC---GGCGSSCCVP 38
Score = 27.7 bits (60), Expect = 2.1
Identities = 15/50 (30%), Positives = 16/50 (32%), Gaps = 4/50 (8%)
Query: 12 GICMCGDNCKCTTCNCKTCRKSCCPCCPPGCAKCARGCICKGGSDKCSCC 61
G C C + C C S C C GC C C K CC
Sbjct: 2 GCCGCSEGCGSGCGGCG----SGCGGCGSGCGGCGSSCCVPVCCCKPVCC 47
>gi|122891874 keratin associated protein 5-5 [Homo sapiens]
Length = 237
Score = 41.6 bits (96), Expect = 1e-04
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Query: 14 CMCGDNCKCTTCNCKTCRKSCC--PCCPPGC--AKCARGCICKGGSDKCSCC 61
C C C + C C+ CC CC P C + C + C C G SCC
Sbjct: 163 CCCSSGCGSSCCQSSCCKPYCCQSSCCKPYCCQSSCCKPCSCFSGCGS-SCC 213
Score = 36.6 bits (83), Expect = 0.004
Identities = 21/65 (32%), Positives = 24/65 (36%), Gaps = 9/65 (13%)
Query: 4 RECVCMSG--GICMCGDNCKCTTCNCKTCRKSCC--PCCPPGCAKCARGC---ICKGGSD 56
+ C C SG C CK C C+ CC CC P C GC C+
Sbjct: 161 KPCCCSSGCGSSCCQSSCCKPYCCQSSCCKPYCCQSSCCKP--CSCFSGCGSSCCQSSCY 218
Query: 57 KCSCC 61
K CC
Sbjct: 219 KPCCC 223
Score = 35.8 bits (81), Expect = 0.008
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
Query: 6 CVCMSGGICMCGDN---CKCTTCNCKTCRKSCCPCCPPGC-AKCARGCICKGGSDKCSCC 61
C GG CG + C C+ +C K C CC GC + C + CK + SCC
Sbjct: 132 CGGSKGGCGSCGGSKGGCGSYGCSQSSCCKPC--CCSSGCGSSCCQSSCCKPYCCQSSCC 189
Score = 34.7 bits (78), Expect = 0.017
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 8/57 (14%)
Query: 13 ICMCGDNCKCT-TCNCKTCRKSCCPCC---PPGCAKC--ARGCI--CKGGSDKCSCC 61
+C C C C C+C +C K C C GC C ++G C G C C
Sbjct: 66 VCCCKPMCCCVPACSCSSCGKGGCGSCGGSKRGCVSCGVSKGACGSCGGSKGGCGSC 122
Score = 32.7 bits (73), Expect = 0.064
Identities = 22/65 (33%), Positives = 23/65 (35%), Gaps = 11/65 (16%)
Query: 8 CMSG--GICMCGDNCKCTTCNCKTC-----RKSCCPCCPPGCAKCA---RGCI-CKGGSD 56
C SG G CG C C CK SC C GC C RGC+ C
Sbjct: 48 CGSGCAGCGGCGSGCCVPVCCCKPMCCCVPACSCSSCGKGGCGSCGGSKRGCVSCGVSKG 107
Query: 57 KCSCC 61
C C
Sbjct: 108 ACGSC 112
Score = 32.0 bits (71), Expect = 0.11
Identities = 21/66 (31%), Positives = 21/66 (31%), Gaps = 12/66 (18%)
Query: 6 CVCMSGGICMCGDNCKCTTCNCKTCRKSCCPC------CPPGCAKCA---RGCICKGGSD 56
C SGG CG C C C C C C GC C GC GG
Sbjct: 3 CCGCSGG---CGSGCGGRGSGCGGCGSGCGGCGSGCGGCGSGCGGCGGCGSGCAGCGGCG 59
Query: 57 KCSCCP 62
C P
Sbjct: 60 SGCCVP 65
Score = 32.0 bits (71), Expect = 0.11
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Query: 4 RECVCMSGGICMCGDNCKCTTCNCKTCRKSCCPCCPPGCAKC 45
+ C C SG CG +C ++C C +S CC P C +C
Sbjct: 200 KPCSCFSG----CGSSCCQSSCYKPCCCQS--SCCVPVCCQC 235
Score = 29.3 bits (64), Expect = 0.71
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 11/59 (18%)
Query: 6 CVCMSGGICMCGDNCKCTTCNCKTCRKSCCPC--CPPGCAKCARGCICKGGSDKCSCCP 62
C G CG C C C C C C GC C C CK C C P
Sbjct: 28 CGGCGSGCGGCGSGCG----GCGGCGSGCAGCGGCGSGC--CVPVCCCK---PMCCCVP 77
>gi|60593040 keratin associated protein 5-10 [Homo sapiens]
Length = 202
Score = 40.8 bits (94), Expect = 2e-04
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Query: 6 CVCMSGGICMCGDNCK-CTTCNCKTCRKSCCP--CCPPGCAKCARGCICKGGSDKCSCC 61
C GG CG + C +C C C +CC CC GC C + C + SCC
Sbjct: 117 CGGSKGGCGSCGGSKGGCGSCGCSQC--NCCKPCCCSSGCGSCCQSSCCNPCCCQSSCC 173
Score = 39.3 bits (90), Expect = 7e-04
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 7/61 (11%)
Query: 5 ECVCMSGGICM--CGDNCKCTTCNCKTCRKSCC--PCCPPGCAKCARGCICKGGSDKCSC 60
+C C C CG C+ + CN C+ SCC CC C K C C+ C
Sbjct: 141 QCNCCKPCCCSSGCGSCCQSSCCNPCCCQSSCCVPVCCQSSCCK---PCCCQSSCCVPVC 197
Query: 61 C 61
C
Sbjct: 198 C 198
Score = 34.7 bits (78), Expect = 0.017
Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 10/65 (15%)
Query: 6 CVCMSGGICMCGDNCKCTTCNCKTCRKSCCP---CCPPGCAKCARGCICK------GGSD 56
C G CG C C C SCC CC P C C C C G
Sbjct: 14 CGGCGSGCGGCGSGCGGYGSGCGGCGSSCCVPVCCCKPVCC-CVPACSCSSCGSCGGSKG 72
Query: 57 KCSCC 61
C C
Sbjct: 73 DCGSC 77
Score = 33.9 bits (76), Expect = 0.029
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 7/62 (11%)
Query: 7 VCMSGGICMCGDNCKCTTC-NCKTCRKSCCPC--CPPGCAKCA---RGC-ICKGGSDKCS 59
VC +C C C C++C +C + C C GC C GC C G C
Sbjct: 46 VCCCKPVCCCVPACSCSSCGSCGGSKGDCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCG 105
Query: 60 CC 61
C
Sbjct: 106 SC 107
Score = 31.6 bits (70), Expect = 0.14
Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 11/67 (16%)
Query: 6 CVCMSGGICMCGDNCK-CTTCN-----CKTCRKSCCPCCPPGCAK--CARGCICKGGSDK 57
C GG CG + C +C C +C S C GC++ C + C C G
Sbjct: 97 CGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQCNCCKPCCCSSGCGS 156
Query: 58 C---SCC 61
C SCC
Sbjct: 157 CCQSSCC 163
Score = 27.7 bits (60), Expect = 2.1
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 3/40 (7%)
Query: 25 CNCKTCRKSCCPCCPPGCAKCARGCICKG---GSDKCSCC 61
C C S C C GC C GC G G SCC
Sbjct: 4 CGCSGGCGSGCGGCGSGCGGCGSGCGGYGSGCGGCGSSCC 43
Score = 25.8 bits (55), Expect = 7.9
Identities = 11/35 (31%), Positives = 12/35 (34%), Gaps = 3/35 (8%)
Query: 6 CVCMSG---GICMCGDNCKCTTCNCKTCRKSCCPC 37
C C S +C CK C C CC C
Sbjct: 166 CCCQSSCCVPVCCQSSCCKPCCCQSSCCVPVCCQC 200
>gi|154146260 keratin associated protein 4-3 [Homo sapiens]
Length = 195
Score = 40.4 bits (93), Expect = 3e-04
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 5/50 (10%)
Query: 14 CMCGDNCKCTTCNCKTCRKSCC--PCCPPGCAKCARGCICKGGSDKCSCC 61
C CK + C CR SCC CC P C C C CK + +CC
Sbjct: 54 CCISSCCKPSCCRTTCCRPSCCISSCCRPSC--CISSC-CKPSCCRTTCC 100
Score = 40.0 bits (92), Expect = 4e-04
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 8/50 (16%)
Query: 16 CGDNCKCTTCNCKT--CRKSCC--PCCPPGCAKCARGCICKGGSDKCSCC 61
C +C TTC C+T CR SCC CC P C C C CK + +CC
Sbjct: 25 CRPSCCQTTC-CRTTCCRPSCCISSCCRPSC--CISSC-CKPSCCRTTCC 70
Score = 40.0 bits (92), Expect = 4e-04
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 5/50 (10%)
Query: 14 CMCGDNCKCTTCNCKTCRKSCC--PCCPPGCAKCARGCICKGGSDKCSCC 61
C CK + C CR SCC CC P C C C CK + +CC
Sbjct: 84 CCISSCCKPSCCRTTCCRPSCCISSCCRPSC--CISSC-CKPSCCQTTCC 130
Score = 35.4 bits (80), Expect = 0.010
Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 4/52 (7%)
Query: 14 CMCGDNCKCTTCNCKTCRKSCC--PCCPPGCAK--CARGCICKGGSDKCSCC 61
C CK + C CR SCC C P C + C R C SCC
Sbjct: 114 CCISSCCKPSCCQTTCCRPSCCISSCYRPQCCQPSCCRPACCISSCCHPSCC 165
Score = 35.0 bits (79), Expect = 0.013
Identities = 20/60 (33%), Positives = 22/60 (36%), Gaps = 14/60 (23%)
Query: 16 CGDNCKCTTCNC-----KTCRKSCC-------PCCPPGC--AKCARGCICKGGSDKCSCC 61
CG C +C CR SCC CC P C + C R C K SCC
Sbjct: 6 CGSVCSDQSCGQGLGQESCCRPSCCQTTCCRTTCCRPSCCISSCCRPSCCISSCCKPSCC 65
>gi|51972220 keratin associated protein 5-2 [Homo sapiens]
Length = 177
Score = 40.4 bits (93), Expect = 3e-04
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 12/62 (19%)
Query: 4 RECVCMSGGICMCGDNCKCTTCNCKTCRKSCC--PCCPPGC--AKCARGCICKGGSDKCS 59
+ C C SG CG +C C C+ CC CC P C + C + C C+
Sbjct: 120 KPCCCSSG----CGSSC----CQSSCCKPCCCQSSCCVPVCCQSSCCKPCCCQSNCCVPV 171
Query: 60 CC 61
CC
Sbjct: 172 CC 173
Score = 36.2 bits (82), Expect = 0.006
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 6 CVCMSGGICMCGDNCK-CTTCNCK--TCRKSCCPCCPPGC-AKCARGCICKGGSDKCSCC 61
C GG CG + C +C C +C K C CC GC + C + CK + SCC
Sbjct: 91 CGGSKGGCGSCGGSKGGCGSCGCSQSSCCKPC--CCSSGCGSSCCQSSCCKPCCCQSSCC 148
Score = 33.1 bits (74), Expect = 0.049
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 6/57 (10%)
Query: 7 VCMSGGICMCGDNCKCTTCNCKTCRKSCCPCC---PPGCAKCARGCICKGGSDKCSC 60
VC +C C CT+C K C C GC C KGG C C
Sbjct: 60 VCCCKPVCSWVPACSCTSCGSCGGSKGGCGSCGGSKGGCGSCGGS---KGGCGSCGC 113
Score = 31.6 bits (70), Expect = 0.14
Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 14/64 (21%)
Query: 6 CVCMSGGICMCGDNCK-CTTCN-----CKTCRKSCCPCCPPGCAKCARGCICKGGSDKC- 58
C GG CG + C +C C +C S CC P C C+ GC GS C
Sbjct: 81 CGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQSSCCKPCC--CSSGC----GSSCCQ 134
Query: 59 -SCC 61
SCC
Sbjct: 135 SSCC 138
Score = 27.3 bits (59), Expect = 2.7
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 9/55 (16%)
Query: 12 GICMCGDNCKCTTCNCKTCRKSCCPCCPPGCAKCAR-----GCICKGGSDKCSCC 61
G C C C C C SC C GC C G C G S C C
Sbjct: 2 GCCGCSRGCGS---GCGGCGSSCGGC-GSGCGGCGSGRGGCGSGCGGCSSSCGGC 52
Score = 26.2 bits (56), Expect = 6.0
Identities = 11/37 (29%), Positives = 13/37 (35%), Gaps = 3/37 (8%)
Query: 4 RECVCMSG---GICMCGDNCKCTTCNCKTCRKSCCPC 37
+ C C S +C CK C C CC C
Sbjct: 139 KPCCCQSSCCVPVCCQSSCCKPCCCQSNCCVPVCCQC 175
>gi|114431244 von Willebrand factor C and EGF domains [Homo sapiens]
Length = 955
Score = 39.7 bits (91), Expect = 5e-04
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
Query: 6 CVCMSGGICMCGDNCKCTTCNCKTCRKSCCPCCPPGCAKCAR----GCICKGGSDKCSCC 61
CVC++G + C C + CC C P C R G + GG D+C+ C
Sbjct: 466 CVCLAGNVSCISPECPSGPCQTPP-QTDCCTCVPVRCYFHGRWYADGAVFSGGGDECTTC 524
Score = 30.4 bits (67), Expect = 0.32
Identities = 25/81 (30%), Positives = 29/81 (35%), Gaps = 28/81 (34%)
Query: 2 DPRE-CVCMSGGICMCGDNCKCTTCNCKTCRK------SCCPCCPPGCAKCAR------- 47
DP E C+C + G +CK T C +C CCP C GC R
Sbjct: 587 DPCELCICQADGSV----SCKRTDC-VDSCPHPIRIPGQCCPDCSAGCTYTGRIFYNNET 641
Query: 48 ---------GCICKGGSDKCS 59
CIC GS CS
Sbjct: 642 FPSVLDPCLSCICLLGSVACS 662
Score = 26.2 bits (56), Expect = 6.0
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 8/47 (17%)
Query: 18 DNCKCTTCNCKTCRKSC--CPCCPPGCAKCARGCICKGGSDKCSCCP 62
D+ CT C C+ SC PC CA + G D CS CP
Sbjct: 703 DDEPCTRCTCQLGEVSCEKVPC----QRACADPALLPG--DCCSSCP 743
>gi|239756792 PREDICTED: hypothetical protein [Homo sapiens]
Length = 188
Score = 39.3 bits (90), Expect = 7e-04
Identities = 22/53 (41%), Positives = 23/53 (43%), Gaps = 10/53 (18%)
Query: 16 CGDNCKCTTCNCKTCRKSCC-------PCCPPGCAKCARGCICKGGSDKCSCC 61
C + C TTC TC SCC PCC P C C C C S SCC
Sbjct: 57 CQNTCCRTTCCQPTCVASCCQPSCCSTPCCQPTC--CGSSC-CGQTSCGSSCC 106
Score = 33.9 bits (76), Expect = 0.029
Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 12/63 (19%)
Query: 8 CMSGGICM---CGDNCKCTTCNCKTCRKSCC------PCCPPGCAKCARGCICKGGSDKC 58
C C+ C C T C CR +CC CC P C C+ C C+
Sbjct: 37 CCQPSCCVPSCCQPCCHPTCCQNTCCRTTCCQPTCVASCCQPSC--CSTPC-CQPTCCGS 93
Query: 59 SCC 61
SCC
Sbjct: 94 SCC 96
Score = 33.1 bits (74), Expect = 0.049
Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 17/63 (26%)
Query: 16 CGDNCKCTTCNCKTCRKSC-----------CPCCPPGCA--KCARGC----ICKGGSDKC 58
C C+ T C CR +C PCC P C C + C C+ +
Sbjct: 5 CSPCCQPTCCRTTCCRTTCWKPTTVTTCSSTPCCQPSCCVPSCCQPCCHPTCCQNTCCRT 64
Query: 59 SCC 61
+CC
Sbjct: 65 TCC 67
Score = 30.8 bits (68), Expect = 0.24
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
Query: 8 CMSGGICM--CGDNCKCTTCNCKTCRKSCCPCCPPGC-AKCARGCIC 51
C C+ C C TTC TC + C CC P C + C + C
Sbjct: 143 CNESSYCLPCCRPTCCQTTCYRTTCCRPSC-CCSPCCVSSCCQPSCC 188
Score = 30.0 bits (66), Expect = 0.42
Identities = 19/81 (23%), Positives = 24/81 (29%), Gaps = 22/81 (27%)
Query: 3 PRECVCMSGGICMCGDNCKCTTCNCKTCRKSCCP-----------CCPPGCA-------- 43
P C G CG +C C C+ C P CC P C
Sbjct: 88 PTCCGSSCCGQTSCGSSCCQPICGSSCCQPCCHPTCYQTTCFRTTCCQPTCCHQTCNESS 147
Query: 44 ---KCARGCICKGGSDKCSCC 61
C R C+ + +CC
Sbjct: 148 YCLPCCRPTCCQTTCYRTTCC 168
>gi|239751312 PREDICTED: hypothetical protein [Homo sapiens]
Length = 188
Score = 39.3 bits (90), Expect = 7e-04
Identities = 22/53 (41%), Positives = 23/53 (43%), Gaps = 10/53 (18%)
Query: 16 CGDNCKCTTCNCKTCRKSCC-------PCCPPGCAKCARGCICKGGSDKCSCC 61
C + C TTC TC SCC PCC P C C C C S SCC
Sbjct: 57 CQNTCCRTTCCQPTCVASCCQPSCCSTPCCQPTC--CGSSC-CGQTSCGSSCC 106
Score = 33.9 bits (76), Expect = 0.029
Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 12/63 (19%)
Query: 8 CMSGGICM---CGDNCKCTTCNCKTCRKSCC------PCCPPGCAKCARGCICKGGSDKC 58
C C+ C C T C CR +CC CC P C C+ C C+
Sbjct: 37 CCQPSCCVPSCCQPCCHPTCCQNTCCRTTCCQPTCVASCCQPSC--CSTPC-CQPTCCGS 93
Query: 59 SCC 61
SCC
Sbjct: 94 SCC 96
Score = 33.1 bits (74), Expect = 0.049
Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 17/63 (26%)
Query: 16 CGDNCKCTTCNCKTCRKSC-----------CPCCPPGCA--KCARGC----ICKGGSDKC 58
C C+ T C CR +C PCC P C C + C C+ +
Sbjct: 5 CSPCCQPTCCRTTCCRTTCWKPTTVTTCSSTPCCQPSCCVPSCCQPCCHPTCCQNTCCRT 64
Query: 59 SCC 61
+CC
Sbjct: 65 TCC 67
Score = 30.8 bits (68), Expect = 0.24
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
Query: 8 CMSGGICM--CGDNCKCTTCNCKTCRKSCCPCCPPGC-AKCARGCIC 51
C C+ C C TTC TC + C CC P C + C + C
Sbjct: 143 CNESSYCLPCCRPTCCQTTCYRTTCCRPSC-CCSPCCVSSCCQPSCC 188
Score = 30.0 bits (66), Expect = 0.42
Identities = 19/81 (23%), Positives = 24/81 (29%), Gaps = 22/81 (27%)
Query: 3 PRECVCMSGGICMCGDNCKCTTCNCKTCRKSCCP-----------CCPPGCA-------- 43
P C G CG +C C C+ C P CC P C
Sbjct: 88 PTCCGSSCCGQTSCGSSCCQPICGSSCCQPCCHPTCYQTTCFRTTCCQPTCCHQTCNESS 147
Query: 44 ---KCARGCICKGGSDKCSCC 61
C R C+ + +CC
Sbjct: 148 YCLPCCRPTCCQTTCYRTTCC 168
>gi|239745809 PREDICTED: hypothetical protein [Homo sapiens]
Length = 188
Score = 39.3 bits (90), Expect = 7e-04
Identities = 22/53 (41%), Positives = 23/53 (43%), Gaps = 10/53 (18%)
Query: 16 CGDNCKCTTCNCKTCRKSCC-------PCCPPGCAKCARGCICKGGSDKCSCC 61
C + C TTC TC SCC PCC P C C C C S SCC
Sbjct: 57 CQNTCCRTTCCQPTCVASCCQPSCCSTPCCQPTC--CGSSC-CGQTSCGSSCC 106
Score = 33.9 bits (76), Expect = 0.029
Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 12/63 (19%)
Query: 8 CMSGGICM---CGDNCKCTTCNCKTCRKSCC------PCCPPGCAKCARGCICKGGSDKC 58
C C+ C C T C CR +CC CC P C C+ C C+
Sbjct: 37 CCQPSCCVPSCCQPCCHPTCCQNTCCRTTCCQPTCVASCCQPSC--CSTPC-CQPTCCGS 93
Query: 59 SCC 61
SCC
Sbjct: 94 SCC 96
Score = 33.1 bits (74), Expect = 0.049
Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 17/63 (26%)
Query: 16 CGDNCKCTTCNCKTCRKSC-----------CPCCPPGCA--KCARGC----ICKGGSDKC 58
C C+ T C CR +C PCC P C C + C C+ +
Sbjct: 5 CSPCCQPTCCRTTCCRTTCWKPTTVTTCSSTPCCQPSCCVPSCCQPCCHPTCCQNTCCRT 64
Query: 59 SCC 61
+CC
Sbjct: 65 TCC 67
Score = 30.8 bits (68), Expect = 0.24
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
Query: 8 CMSGGICM--CGDNCKCTTCNCKTCRKSCCPCCPPGC-AKCARGCIC 51
C C+ C C TTC TC + C CC P C + C + C
Sbjct: 143 CNESSYCLPCCRPTCCQTTCYRTTCCRPSC-CCSPCCVSSCCQPSCC 188
Score = 30.0 bits (66), Expect = 0.42
Identities = 19/81 (23%), Positives = 24/81 (29%), Gaps = 22/81 (27%)
Query: 3 PRECVCMSGGICMCGDNCKCTTCNCKTCRKSCCP-----------CCPPGCA-------- 43
P C G CG +C C C+ C P CC P C
Sbjct: 88 PTCCGSSCCGQTSCGSSCCQPICGSSCCQPCCHPTCYQTICFRTTCCQPTCCHQTCNESS 147
Query: 44 ---KCARGCICKGGSDKCSCC 61
C R C+ + +CC
Sbjct: 148 YCLPCCRPTCCQTTCYRTTCC 168
>gi|14210534 keratin associated protein 4.4 [Homo sapiens]
Length = 166
Score = 39.3 bits (90), Expect = 7e-04
Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Query: 14 CMCGDNCKCTTCNCKTCRKSCC--PCCPPGCAK--CARGCICKGGSDKCSCC 61
C C+ T C CR SCC CC P C + C R C SCC
Sbjct: 20 CCRPSYCQTTCCRTTCCRPSCCVSSCCRPQCCQTTCCRTTCCHPSCCVSSCC 71
Score = 35.4 bits (80), Expect = 0.010
Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 9/51 (17%)
Query: 20 CKCTTCNCKTCRKSCCP--CCPPGC-------AKCARGCICKGGSDKCSCC 61
C+ T C CR CC CC P C + C R C+ + +CC
Sbjct: 96 CRTTCCRPSCCRPQCCQSVCCQPTCCCPSYCVSSCCRPQCCQTTCCRTTCC 146
Score = 34.3 bits (77), Expect = 0.022
Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 20/74 (27%)
Query: 4 RECVCMSGGICMCGDNCKCTTCNCKT------------CRKSCCP--CCPPGCAK--CAR 47
R C+S C C TTC C+T CR CC CC P C + C +
Sbjct: 37 RPSCCVSS---CCRPQCCQTTC-CRTTCCHPSCCVSSCCRPQCCQSVCCQPTCCRPQCCQ 92
Query: 48 GCICKGGSDKCSCC 61
C+ + SCC
Sbjct: 93 TTCCRTTCCRPSCC 106
Score = 33.1 bits (74), Expect = 0.049
Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 4/53 (7%)
Query: 13 ICMCGDNCKCTTCNCKTCRKSCC--PCCPPGCAK--CARGCICKGGSDKCSCC 61
+C C+ C CR +CC CC P C + C + C SCC
Sbjct: 79 VCCQPTCCRPQCCQTTCCRTTCCRPSCCRPQCCQSVCCQPTCCCPSYCVSSCC 131
Score = 32.0 bits (71), Expect = 0.11
Identities = 18/64 (28%), Positives = 23/64 (35%), Gaps = 15/64 (23%)
Query: 8 CMSGGICMCGDNCKCTTCNCKTCRKSCC-------PCCPPGCAK--CARGCICKGGSDKC 58
C+S C C+ C CR CC CC P C + C + C+
Sbjct: 66 CVSS--CCRPQCCQSVCCQPTCCRPQCCQTTCCRTTCCRPSCCRPQCCQSVCCQ----PT 119
Query: 59 SCCP 62
CCP
Sbjct: 120 CCCP 123
Score = 29.3 bits (64), Expect = 0.71
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Query: 6 CVCMSGGICMC--GDNCKCTTCNCKTCRKSCC--PCCPPGCAK 44
C C S + C C+ T C CR SCC C P C +
Sbjct: 120 CCCPSYCVSSCCRPQCCQTTCCRTTCCRPSCCVSRCYRPHCGQ 162
>gi|13994129 keratin associated protein 4-12 [Homo sapiens]
Length = 201
Score = 38.9 bits (89), Expect = 9e-04
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 7/52 (13%)
Query: 16 CGDNCKCTTCNCKT--CRKSCC--PCCPPGCAK--CARGCICKGGSDKCSCC 61
C +C TTC C+T CR SCC CC P C + C + C+ + +CC
Sbjct: 21 CRPSCCQTTC-CRTTCCRPSCCVSSCCRPQCCQSVCCQPTCCRPSCCQTTCC 71
Score = 38.9 bits (89), Expect = 9e-04
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 7/52 (13%)
Query: 16 CGDNCKCTTCNCKT--CRKSCC--PCCPPGCAK--CARGCICKGGSDKCSCC 61
C +C TTC C+T CR SCC CC P C + C + C+ + +CC
Sbjct: 61 CRPSCCQTTC-CRTTCCRPSCCVSSCCRPQCCQSVCCQPTCCRPSCCQTTCC 111
Score = 38.1 bits (87), Expect = 0.002
Identities = 23/57 (40%), Positives = 26/57 (45%), Gaps = 12/57 (21%)
Query: 16 CGDNCKCTTCNCKT--CRKSCC--PCCPPGCAK-------CARGCICKGGSDKCSCC 61
C +C TTC C+T CR SCC CC P C + C R C S SCC
Sbjct: 101 CRPSCCQTTC-CRTTCCRPSCCVSSCCRPQCCQSVCCQPTCCRPSCCISSSCCPSCC 156
Score = 36.6 bits (83), Expect = 0.004
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 6/52 (11%)
Query: 4 RECVCMSGGICMCGDNCKCTTCNCKTCRKSCC---PCCPPGC-AKCARGCIC 51
R C+S C C+ C CR SCC CCP C + C R C C
Sbjct: 117 RPSCCVSS--CCRPQCCQSVCCQPTCCRPSCCISSSCCPSCCESSCCRPCCC 166
Score = 35.8 bits (81), Expect = 0.008
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 7 VCMSGGICMCGDNCKCTTCNCKTCRKSCC--PCCPPGCAK--CARGCICKGGSDKCSCC 61
VC G C + C+ + C CR +CC CC C + C + C+ + SCC
Sbjct: 9 VCSDQG-CGLENCCRPSCCQTTCCRTTCCRPSCCVSSCCRPQCCQSVCCQPTCCRPSCC 66
Score = 34.7 bits (78), Expect = 0.017
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Query: 13 ICMCGDNCKCTTCNCKTCRKSCC--PCCPPGCAK--CARGCICKGGSDKCSCC 61
+C C+ + C CR +CC CC C + C + C+ + SCC
Sbjct: 54 VCCQPTCCRPSCCQTTCCRTTCCRPSCCVSSCCRPQCCQSVCCQPTCCRPSCC 106
Score = 34.7 bits (78), Expect = 0.017
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Query: 13 ICMCGDNCKCTTCNCKTCRKSCC--PCCPPGCAK--CARGCICKGGSDKCSCC 61
+C C+ + C CR +CC CC C + C + C+ + SCC
Sbjct: 94 VCCQPTCCRPSCCQTTCCRTTCCRPSCCVSSCCRPQCCQSVCCQPTCCRPSCC 146
Score = 28.1 bits (61), Expect = 1.6
Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 8/58 (13%)
Query: 13 ICMCGDNCKCTTCNCKTCRKSCC------PCC--PPGCAKCARGCICKGGSDKCSCCP 62
+C C+ + C +C SCC PCC P C + + C + S CP
Sbjct: 134 VCCQPTCCRPSCCISSSCCPSCCESSCCRPCCCLRPVCGRVSCHTTCYRPTCVISTCP 191
>gi|54400749 keratin associated protein 5-1 [Homo sapiens]
Length = 278
Score = 38.9 bits (89), Expect = 9e-04
Identities = 22/62 (35%), Positives = 23/62 (37%), Gaps = 8/62 (12%)
Query: 6 CVCMSGGICMCGDNCKCTTCNCKTCRKSCCP---CCPPGCAKCARGCIC----KGGSDKC 58
C GG CG + C C SCC CC P C C C C KGG C
Sbjct: 102 CGGSKGGCGSCGGSKGGCGSGCGGCGSSCCVPVCCCKPMCC-CVPACSCSSCGKGGCGSC 160
Query: 59 SC 60
C
Sbjct: 161 GC 162
Score = 38.5 bits (88), Expect = 0.001
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Query: 13 ICMCGDNCKCT-TCNCKTCRKSCCPCCPPGCAKCARGCICKGGSDKCSCC 61
+C C C C C+C +C K C C GC+K A G C G C C
Sbjct: 134 VCCCKPMCCCVPACSCSSCGKGGCGSC--GCSKGACGS-CGGSKGGCGSC 180
Score = 37.7 bits (86), Expect = 0.002
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Query: 6 CVCMSGGICMCGDNCKCTTCNCKTCRKSCCPCCPPGC-AKCARGCICKGGSDKCSCC 61
C C S G C ++C+ +C K C CC GC + C + CK + SCC
Sbjct: 215 CSCSSCGSCAGSKGGCGSSCSQCSCCKPC--CCSSGCGSSCCQSSCCKPCCSQSSCC 269
Score = 35.8 bits (81), Expect = 0.008
Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 11/60 (18%)
Query: 7 VCMSGGICMCGDNCKCTTCN---CKTC--RKSCCPCC---PPGCAKCARGCICKGGSDKC 58
VC +C C C C++C C +C K C C GC C CKGG C
Sbjct: 134 VCCCKPMCCCVPACSCSSCGKGGCGSCGCSKGACGSCGGSKGGCGSCGG---CKGGCGSC 190
Score = 33.9 bits (76), Expect = 0.029
Identities = 19/65 (29%), Positives = 23/65 (35%), Gaps = 10/65 (15%)
Query: 6 CVCMSGGICMCGDNCKCTTCNCKTCRKSCCPC------CPPGCAKCARGC---ICKGGSD 56
C C G CG + K +C C+ C C C GC C GC +C
Sbjct: 160 CGCSKGACGSCGGS-KGGCGSCGGCKGGCGSCGGSKGGCGSGCGGCGSGCGVPVCCCSCS 218
Query: 57 KCSCC 61
C C
Sbjct: 219 SCGSC 223
Score = 31.6 bits (70), Expect = 0.14
Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Query: 17 GDNCKCTTCNCKT--CRKSCCPCCPPGCAKCARGCICKGGSDKCSCC 61
G +C C CK CR C C G C KGG C C
Sbjct: 39 GSSCCVPVCCCKPVCCRVPTCSCSSCGKGGCGSSGGSKGGCGSCGGC 85
Score = 30.0 bits (66), Expect = 0.42
Identities = 18/66 (27%), Positives = 20/66 (30%), Gaps = 11/66 (16%)
Query: 6 CVCMSGGICMCGDNCKCTTCNCKTCRKSCCP---CCPP--------GCAKCARGCICKGG 54
C G CG C C SCC CC P C+ C +G G
Sbjct: 14 CGGCGSGCGGCGSGCGGCGSGCGGSGSSCCVPVCCCKPVCCRVPTCSCSSCGKGGCGSSG 73
Query: 55 SDKCSC 60
K C
Sbjct: 74 GSKGGC 79
Score = 29.3 bits (64), Expect = 0.71
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 3/40 (7%)
Query: 25 CNCKTCRKSCCPCCPPGCAKCARGCICKG---GSDKCSCC 61
C C S C C GC C GC G G SCC
Sbjct: 4 CGCSGGCGSSCGGCGSGCGGCGSGCGGCGSGCGGSGSSCC 43
Score = 28.9 bits (63), Expect = 0.93
Identities = 18/58 (31%), Positives = 22/58 (37%), Gaps = 6/58 (10%)
Query: 6 CVCMSGGICMCGDNCK-CTT-CNCKTCRKSCCPCCPPGCAKCARGCICKGGSDKCSCC 61
C G CG C C + C C CC C G ++G C +CSCC
Sbjct: 187 CGSCGGSKGGCGSGCGGCGSGCGVPVC---CCSCSSCGSCAGSKGG-CGSSCSQCSCC 240
Score = 28.1 bits (61), Expect = 1.6
Identities = 19/60 (31%), Positives = 19/60 (31%), Gaps = 11/60 (18%)
Query: 8 CMSGGICMCGDNCKC--TTCNCKTCRKSCCPCCPPGCAK-------CARGCICKGGSDKC 58
C G C C C C TC SC C GC C CKGG C
Sbjct: 35 CGGSGSSCCVPVCCCKPVCCRVPTC--SCSSCGKGGCGSSGGSKGGCGSCGGCKGGCGSC 92
Score = 26.9 bits (58), Expect = 3.5
Identities = 15/56 (26%), Positives = 15/56 (26%), Gaps = 10/56 (17%)
Query: 16 CGDNCKCTTCNCKTCRKSCCPCCPPGCAKCARGCIC-------KGGSDKC---SCC 61
CG C C C C GC C C G C SCC
Sbjct: 204 CGSGCGVPVCCCSCSSCGSCAGSKGGCGSSCSQCSCCKPCCCSSGCGSSCCQSSCC 259
>gi|238859649 keratin associated protein 10-8 [Homo sapiens]
Length = 259
Score = 38.5 bits (88), Expect = 0.001
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 17/64 (26%)
Query: 8 CMSGGICMCGDNCKCTTCNCKTCRKSCC-------PCCPPGCAK---CARGC---ICKGG 54
C SG C D+C + C +C+ +CC CC P C K C C IC G
Sbjct: 86 CQSG----CTDSCTPSCCQQSSCQPACCTSSPCQQACCVPVCCKSNCCKPVCCVSICSGA 141
Query: 55 SDKC 58
S C
Sbjct: 142 SSPC 145
Score = 34.7 bits (78), Expect = 0.017
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 11/66 (16%)
Query: 6 CVCMSGGI---CMCGDNCKCTTCNCKTCRKSCCP-------CCPPGCAKCARGCICKGGS 55
CV + G C +C+ C C+++CC CC P C+ + C C+ S
Sbjct: 134 CVSICSGASSPCCQQSSCQSACCTFSPCQQACCVPICCKPICCVPVCSGASSLC-CQKSS 192
Query: 56 DKCSCC 61
+ +CC
Sbjct: 193 CQPACC 198
Score = 34.3 bits (77), Expect = 0.022
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 12/56 (21%)
Query: 18 DNCKCTTCNCKTCRKSCC--PCCPPG------CA--KCARGCICKGGSDKC--SCC 61
DNC+ + C ++C SCC CC P CA C G +D C SCC
Sbjct: 44 DNCQESCCEPRSCASSCCTPSCCAPAPCLALVCAPVSCEPSPCQSGCTDSCTPSCC 99
Score = 33.9 bits (76), Expect = 0.029
Identities = 19/65 (29%), Positives = 24/65 (36%), Gaps = 9/65 (13%)
Query: 6 CVCMSGG---ICMCGDNCKCTTCNCKTCRKS------CCPCCPPGCAKCARGCICKGGSD 56
CV + G +C +C+ C CR S C P C P C C S
Sbjct: 176 CVPVCSGASSLCCQKSSCQPACCTTSCCRPSSSVSLLCRPVCRPACCVPVPSCCVPASSC 235
Query: 57 KCSCC 61
+ SCC
Sbjct: 236 QPSCC 240
Score = 26.9 bits (58), Expect = 3.5
Identities = 12/47 (25%), Positives = 15/47 (31%), Gaps = 2/47 (4%)
Query: 16 CGDNCKCTTCNCKTCRKSCCPCCPPGCAKCARGCICKGGSDKCSCCP 62
C NC C C + PCC + C C + C P
Sbjct: 124 CKSNCCKPVCCVSICSGASSPCCQQ--SSCQSACCTFSPCQQACCVP 168
>gi|169212012 PREDICTED: keratin-associated protein 9-2-like 1-like
[Homo sapiens]
Length = 169
Score = 38.5 bits (88), Expect = 0.001
Identities = 22/53 (41%), Positives = 23/53 (43%), Gaps = 10/53 (18%)
Query: 16 CGDNCKCTTCNCKTCRKSCC-------PCCPPGCAKCARGCICKGGSDKCSCC 61
C + C TTC TC SCC PCC P C C C C S SCC
Sbjct: 52 CQNTCCRTTCCQPTCVTSCCQPSCCSTPCCQPIC--CGSSC-CGQTSCGSSCC 101
Score = 31.2 bits (69), Expect = 0.19
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 8/54 (14%)
Query: 16 CGDNCKCTTCNCKTCRKSCC--PCCPPGC--AKCARGC----ICKGGSDKCSCC 61
C C TTC T +C PCC P C + C + C C+ + +CC
Sbjct: 9 CQPTCCRTTCWKPTTVTTCSSTPCCQPSCCVSSCCQPCCHPTCCQNTCCRTTCC 62
Score = 30.8 bits (68), Expect = 0.24
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Query: 25 CNCKTCRKSCC-PCCPPGCAK--CARGCICKGGSDKCSCC 61
C ++C SCC PCC P C + C R C + SCC
Sbjct: 126 CLNQSCGSSCCQPCCRPACCETTCCR-TTCFQPTCVTSCC 164
Score = 26.9 bits (58), Expect = 3.5
Identities = 11/38 (28%), Positives = 13/38 (34%), Gaps = 11/38 (28%)
Query: 16 CGDNCKCTTCNCKTCRKSCC-----------PCCPPGC 42
CG +C C C +CC CC P C
Sbjct: 131 CGSSCCQPCCRPACCETTCCRTTCFQPTCVTSCCQPAC 168
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.331 0.144 0.623
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,752,416
Number of Sequences: 37866
Number of extensions: 188367
Number of successful extensions: 3073
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 229
Number of HSP's that attempted gapping in prelim test: 1193
Number of HSP's gapped (non-prelim): 1340
length of query: 62
length of database: 18,247,518
effective HSP length: 35
effective length of query: 27
effective length of database: 16,922,208
effective search space: 456899616
effective search space used: 456899616
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.