Guide to the Human Genome
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Name: MT3 Sequence: fasta or formatted (68aa) NCBI GI: 5174762
Description:

metallothionein 3

Referenced in:

Metallothioneins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3          7           2
 C cysteine           29.4         20           2
 D aspartate           4.4          3           1
 E glutamate          11.8          8           1
 F phenylalanine       0.0          0           0
 G glycine             7.4          5           2
 H histidine           0.0          0           0
 I isoleucine          0.0          0           0
 K lysine             11.8          8           2
 L leucine             0.0          0           0
 M methionine          1.5          1           1
 N asparagine          0.0          0           0
 P proline             5.9          4           1
 Q glutamine           1.5          1           1
 R arginine            0.0          0           0
 S serine             10.3          7           1
 T threonine           4.4          3           1
 V valine              1.5          1           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   metallothionein 3 
MT1E                  0.603   metallothionein 1E 
MT1A                  0.589   metallothionein 1A 
MT1H                  0.582   metallothionein 1H 
MT1F                  0.582   metallothionein 1F 
MT1G                  0.582   metallothionein 1G 
MT2A                  0.574   metallothionein 2A 
MT1B                  0.560   metallothionein 1B 
MT1X                  0.546   metallothionein 1X 
MT4                   0.546   metallothionein 4 
MT1M                  0.532   metallothionein 1M 
KRTAP5-8              0.149   keratin associated protein 5-8 
KRTAP5-3              0.149   keratin associated protein 5-3 
KRTAP5-9              0.142   keratin associated protein 5-9 
KRTAP5-7              0.128   keratin associated protein 5-7 
KRTAP10-8             0.128   keratin associated protein 10-8 
KRTAP10-6             0.128   keratin associated protein 10-6 
KRTAP5-5              0.128   keratin associated protein 5-5 
KRTAP4-5              0.128   keratin associated protein 4-5 
KRTAP5-2              0.121   keratin associated protein 5-2 
KRTAP5-11             0.121   keratin associated protein 5-11 
KRTAP10-7             0.121   keratin associated protein 10-7 
SCARF1                0.121   scavenger receptor class F, member 1 isoform 3 precu...
SCARF1                0.121   scavenger receptor class F, member 1 isoform 1 precu...
SCARF1                0.121   scavenger receptor class F, member 1 isoform 5 prec...
KRTAP10-4             0.121   keratin associated protein 10-4 
KRTAP10-1             0.121   keratin associated protein 10-1 
KRTAP17-1             0.113   keratin associated protein 17-1 
KRTAP10-9             0.113   keratin associated protein 10-9 
KRTAP5-6              0.113   keratin associated protein 5-6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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