Guide to the Human Genome
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Name: KRTAP5-7 Sequence: fasta or formatted (165aa) NCBI GI: 60279697
Description:

keratin associated protein 5-7

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.6          1           1
 C cysteine           35.8         59           3
 D aspartate           0.0          0           0
 E glutamate           0.6          1           1
 F phenylalanine       0.0          0           0
 G glycine            22.4         37           2
 H histidine           0.0          0           0
 I isoleucine          0.6          1           1
 K lysine              4.8          8           1
 L leucine             0.0          0           0
 M methionine          0.6          1           1
 N asparagine          0.6          1           1
 P proline             4.8          8           1
 Q glutamine           3.6          6           1
 R arginine            0.0          0           0
 S serine             21.2         35           2
 T threonine           0.0          0           0
 V valine              3.6          6           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.6          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 5-7 
KRTAP5-8              0.863   keratin associated protein 5-8 
KRTAP5-3              0.830   keratin associated protein 5-3 
KRTAP5-2              0.796   keratin associated protein 5-2 
KRTAP5-5              0.796   keratin associated protein 5-5 
KRTAP5-10             0.791   keratin associated protein 5-10 
KRTAP5-11             0.768   keratin associated protein 5-11 
KRTAP5-9              0.735   keratin associated protein 5-9 
KRTAP5-4              0.702   keratin associated protein 5-4 
KRTAP5-1              0.695   keratin associated protein 5-1 
KRTAP5-6              0.672   keratin associated protein 5-6 
KRTAP4-3              0.293   keratin associated protein 4-3 
KRTAP10-2             0.282   keratin associated protein 10-2 
KRTAP4-8              0.280   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.280   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.277   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.277   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-9              0.272   keratin associated protein 4-9 
KRTAP4-9              0.272   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-11             0.270   keratin associated protein 4-11 
KRTAP4-9              0.270   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-8              0.265   PREDICTED: keratin associated protein 4-8 
KRTAP4-8              0.262   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.262   keratin associated protein 4.8 
KRTAP4-5              0.262   keratin associated protein 4-5 
KRTAP4-8              0.260   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.260   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-12             0.257   keratin associated protein 4-12 
KRTAP4-4              0.254   keratin associated protein 4.4 
KRTAP10-6             0.249   keratin associated protein 10-6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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