Guide to the Human Genome
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Name: MT1G Sequence: fasta or formatted (61aa) NCBI GI: 10835230
Description:

metallothionein 1G

Referenced in:

Metallothioneins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.5          7           2
 C cysteine           32.8         20           2
 D aspartate           1.6          1           1
 E glutamate           3.3          2           1
 F phenylalanine       0.0          0           0
 G glycine             6.6          4           1
 H histidine           0.0          0           0
 I isoleucine          1.6          1           1
 K lysine             13.1          8           2
 L leucine             0.0          0           0
 M methionine          1.6          1           1
 N asparagine          1.6          1           1
 P proline             3.3          2           1
 Q glutamine           1.6          1           1
 R arginine            0.0          0           0
 S serine             14.8          9           2
 T threonine           3.3          2           1
 V valine              3.3          2           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   metallothionein 1G 
MT1F                  0.960   metallothionein 1F 
MT2A                  0.960   metallothionein 2A 
MT1E                  0.952   metallothionein 1E 
MT1A                  0.911   metallothionein 1A 
MT1H                  0.911   metallothionein 1H 
MT1B                  0.879   metallothionein 1B 
MT1X                  0.879   metallothionein 1X 
MT1M                  0.871   metallothionein 1M 
MT3                   0.661   metallothionein 3 
MT4                   0.637   metallothionein 4 
KRTAP5-3              0.218   keratin associated protein 5-3 
KRTAP5-7              0.202   keratin associated protein 5-7 
KRTAP5-8              0.194   keratin associated protein 5-8 
KRTAP5-9              0.185   keratin associated protein 5-9 
KRTAP4-3              0.161   keratin associated protein 4-3 
KRTAP5-4              0.161   keratin associated protein 5-4 
KRTAP5-5              0.161   keratin associated protein 5-5 
KRTAP5-11             0.161   keratin associated protein 5-11 
KRTAP5-2              0.153   keratin associated protein 5-2 
KRTAP17-1             0.153   keratin associated protein 17-1 
KRTAP5-10             0.153   keratin associated protein 5-10 
KRTAP5-1              0.153   keratin associated protein 5-1 
KRTAP5-6              0.145   keratin associated protein 5-6 
KRTAP4-5              0.145   keratin associated protein 4-5 
KRTAP4-4              0.137   keratin associated protein 4.4 
KRTAP10-9             0.129   keratin associated protein 10-9 
KRTAP10-2             0.129   keratin associated protein 10-2 
KRTAP10-11            0.129   keratin associated protein 10-11 
KRTAP10-1             0.121   keratin associated protein 10-1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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