Guide to the Human Genome
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Name: MT4 Sequence: fasta or formatted (62aa) NCBI GI: 14269578
Description:

metallothionein 4

Referenced in:

Metallothioneins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.2          2           1
 C cysteine           32.3         20           2
 D aspartate           4.8          3           1
 E glutamate           1.6          1           1
 F phenylalanine       0.0          0           0
 G glycine            11.3          7           2
 H histidine           0.0          0           0
 I isoleucine          3.2          2           1
 K lysine              9.7          6           1
 L leucine             0.0          0           0
 M methionine          4.8          3           1
 N asparagine          3.2          2           1
 P proline             8.1          5           2
 Q glutamine           0.0          0           0
 R arginine            4.8          3           1
 S serine              6.5          4           1
 T threonine           4.8          3           2
 V valine              1.6          1           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   metallothionein 4 
MT1E                  0.612   metallothionein 1E 
MT1H                  0.604   metallothionein 1H 
MT2A                  0.604   metallothionein 2A 
MT1A                  0.590   metallothionein 1A 
MT1G                  0.590   metallothionein 1G 
MT1X                  0.582   metallothionein 1X 
MT1B                  0.582   metallothionein 1B 
MT1F                  0.575   metallothionein 1F 
MT3                   0.575   metallothionein 3 
MT1M                  0.537   metallothionein 1M 
KRTAP5-3              0.164   keratin associated protein 5-3 
KRTAP17-1             0.164   keratin associated protein 17-1 
KRTAP5-9              0.157   keratin associated protein 5-9 
KRTAP5-8              0.149   keratin associated protein 5-8 
KRTAP5-6              0.142   keratin associated protein 5-6 
KRTAP5-7              0.142   keratin associated protein 5-7 
KRTAP5-5              0.127   keratin associated protein 5-5 
KRTAP5-10             0.119   keratin associated protein 5-10 
KRTAP4-3              0.112   keratin associated protein 4-3 
KRTAP5-2              0.112   keratin associated protein 5-2 
VWCE                  0.112   von Willebrand factor C and EGF domains 
LOC728318             0.104   PREDICTED: hypothetical protein 
LOC728318             0.104   PREDICTED: hypothetical protein 
LOC728318             0.104   PREDICTED: hypothetical protein 
KRTAP4-4              0.104   keratin associated protein 4.4 
KRTAP4-12             0.104   keratin associated protein 4-12 
KRTAP5-1              0.104   keratin associated protein 5-1 
KRTAP10-8             0.104   keratin associated protein 10-8 
LOC728341             0.104   PREDICTED: keratin-associated protein 9-2-like 1-li...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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