Guide to the Human Genome
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Name: KRTAP17-1 Sequence: fasta or formatted (105aa) NCBI GI: 13994372
Description:

keratin associated protein 17-1

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.0          0           0
 C cysteine           36.2         38           3
 D aspartate           1.9          2           1
 E glutamate           2.9          3           2
 F phenylalanine       1.0          1           1
 G glycine            29.5         31           3
 H histidine           0.0          0           0
 I isoleucine          1.0          1           1
 K lysine              1.0          1           1
 L leucine             0.0          0           0
 M methionine          1.0          1           1
 N asparagine          1.0          1           1
 P proline             4.8          5           1
 Q glutamine           3.8          4           1
 R arginine            0.0          0           0
 S serine             11.4         12           2
 T threonine           3.8          4           1
 V valine              1.0          1           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 17-1 
KRTAP5-5              0.345   keratin associated protein 5-5 
KRTAP5-4              0.325   keratin associated protein 5-4 
KRTAP5-3              0.321   keratin associated protein 5-3 
KRTAP5-6              0.302   keratin associated protein 5-6 
KRTAP5-10             0.298   keratin associated protein 5-10 
KRTAP5-2              0.298   keratin associated protein 5-2 
KRTAP5-7              0.298   keratin associated protein 5-7 
KRTAP5-1              0.298   keratin associated protein 5-1 
KRTAP5-8              0.294   keratin associated protein 5-8 
KRTAP5-9              0.290   keratin associated protein 5-9 
KRTAP4-8              0.282   PREDICTED: keratin associated protein 4-8 isoform 3...
KRTAP4-8              0.282   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.282   PREDICTED: similar to keratin associated protein 4-...
LOC100134267          0.282   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.282   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.282   PREDICTED: similar to keratin associated protein 4-...
KRTAP5-11             0.278   keratin associated protein 5-11 
KRTAP4-12             0.278   keratin associated protein 4-12 
KRTAP4-8              0.274   PREDICTED: keratin associated protein 4-8 
KRTAP4-11             0.274   keratin associated protein 4-11 
KRTAP4-8              0.270   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.270   keratin associated protein 4.8 
KRTAP4-5              0.270   keratin associated protein 4-5 
KRTAP4-3              0.258   keratin associated protein 4-3 
KRTAP4-9              0.254   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP9-2              0.250   keratin associated protein 9.2 
KRTAP4-4              0.246   keratin associated protein 4.4 
LOC728318             0.246   PREDICTED: hypothetical protein 
LOC728318             0.246   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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