Guide to the Human Genome
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Name: KRTAP4-3 Sequence: fasta or formatted (195aa) NCBI GI: 154146260
Description:

keratin associated protein 4-3

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.5          1           1
 C cysteine           36.4         71           2
 D aspartate           0.5          1           1
 E glutamate           0.5          1           1
 F phenylalanine       1.0          2           1
 G glycine             2.6          5           1
 H histidine           1.0          2           1
 I isoleucine          4.6          9           1
 K lysine              1.5          3           1
 L leucine             0.5          1           1
 M methionine          0.5          1           1
 N asparagine          0.0          0           0
 P proline             9.2         18           1
 Q glutamine           3.6          7           1
 R arginine            7.7         15           1
 S serine             20.5         40           2
 T threonine           7.2         14           2
 V valine              1.5          3           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.5          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 4-3 
KRTAP4-9              0.687   keratin associated protein 4-9 
KRTAP4-9              0.687   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-9              0.672   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-8              0.665   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.665   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-11             0.659   keratin associated protein 4-11 
KRTAP4-12             0.657   keratin associated protein 4-12 
KRTAP4-8              0.648   PREDICTED: keratin associated protein 4-8 
KRTAP4-8              0.635   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.635   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.618   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.618   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.616   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.616   keratin associated protein 4.8 
KRTAP4-5              0.600   keratin associated protein 4-5 
KRTAP4-4              0.579   keratin associated protein 4.4 
KRTAP4-7              0.544   keratin associated protein 4-7 
KRTAP4-7              0.544   PREDICTED: keratin associated protein 4-7 
KRTAP4-2              0.473   keratin associated protein 4-2 
LOC728318             0.460   PREDICTED: hypothetical protein 
LOC728318             0.460   PREDICTED: hypothetical protein 
LOC728318             0.458   PREDICTED: hypothetical protein 
KRTAP4-1              0.425   keratin associated protein 4-1 
KRTAP10-5             0.397   keratin associated protein 10-5 
LOC728341             0.393   PREDICTED: keratin-associated protein 9-2-like 1-li...
KRTAP10-11            0.393   keratin associated protein 10-11 
KRTAP10-7             0.391   keratin associated protein 10-7 
KRTAP10-2             0.391   keratin associated protein 10-2 
KRTAP9-2              0.389   keratin associated protein 9.2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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