Guide to the Human Genome
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Name: KRTAP4-4 Sequence: fasta or formatted (166aa) NCBI GI: 14210534
Description:

keratin associated protein 4.4

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.0          0           0
 C cysteine           36.7         61           3
 D aspartate           0.6          1           1
 E glutamate           0.6          1           1
 F phenylalanine       0.0          0           0
 G glycine             2.4          4           1
 H histidine           1.2          2           1
 I isoleucine          0.0          0           0
 K lysine              0.0          0           0
 L leucine             1.2          2           1
 M methionine          0.6          1           1
 N asparagine          1.2          2           1
 P proline             8.4         14           1
 Q glutamine           9.0         15           1
 R arginine            9.0         15           1
 S serine             11.4         19           2
 T threonine          10.8         18           2
 V valine              4.8          8           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.8          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 4.4 
KRTAP4-12             0.787   keratin associated protein 4-12 
KRTAP4-9              0.730   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-8              0.718   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.718   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-9              0.708   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-11             0.708   keratin associated protein 4-11 
KRTAP4-9              0.705   keratin associated protein 4-9 
KRTAP4-8              0.693   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.693   keratin associated protein 4.8 
KRTAP4-8              0.688   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.688   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-5              0.685   keratin associated protein 4-5 
KRTAP4-8              0.677   PREDICTED: keratin associated protein 4-8 
KRTAP4-3              0.670   keratin associated protein 4-3 
KRTAP4-8              0.662   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.662   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-2              0.595   keratin associated protein 4-2 
KRTAP4-7              0.557   keratin associated protein 4-7 
KRTAP4-7              0.557   PREDICTED: keratin associated protein 4-7 
LOC728318             0.495   PREDICTED: hypothetical protein 
LOC728318             0.495   PREDICTED: hypothetical protein 
LOC728318             0.495   PREDICTED: hypothetical protein 
KRTAP4-1              0.460   keratin associated protein 4-1 
KRTAP9-2              0.445   keratin associated protein 9.2 
LOC728341             0.438   PREDICTED: keratin-associated protein 9-2-like 1-li...
KRTAP9-3              0.400   keratin associated protein 9.3 
KRTAP10-11            0.398   keratin associated protein 10-11 
KRTAP9-8              0.398   keratin associated protein 9.8 
KRTAP10-5             0.395   keratin associated protein 10-5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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