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Search of human proteins with 14149712
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14149712 C1q and tumor necrosis factor related protein 5
precursor [Homo sapiens]
(243 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14149712 C1q and tumor necrosis factor related protein 5 prec... 514 e-146
gi|4757760 adiponectin precursor [Homo sapiens] 157 6e-39
gi|65301115 C1q and tumor necrosis factor related protein 9 [Hom... 154 7e-38
gi|13994280 C1q and tumor necrosis factor related protein 7 isof... 153 1e-37
gi|206597454 C1q and tumor necrosis factor related protein 7 iso... 153 1e-37
gi|206597452 C1q and tumor necrosis factor related protein 7 iso... 153 1e-37
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] 152 3e-37
gi|56847616 C1q and tumor necrosis factor related protein 9B [Ho... 151 6e-37
gi|56786155 complement component 1, q subcomponent, C chain prec... 149 2e-36
gi|166235903 complement component 1, q subcomponent, C chain pre... 149 2e-36
gi|122937273 hypothetical protein LOC131149 [Homo sapiens] 148 5e-36
gi|94818738 C1q and tumor necrosis factor related protein 2 [Hom... 148 5e-36
gi|87298828 complement component 1, q subcomponent, B chain prec... 138 4e-33
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] 137 1e-32
gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens] 136 1e-32
gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens] 136 1e-32
gi|7705753 complement component 1, q subcomponent, A chain precu... 113 2e-25
gi|56606142 complement component 1, q subcomponent-like 4 [Homo ... 113 2e-25
gi|58801559 complement component 1, q subcomponent-like 3 [Homo ... 112 3e-25
gi|154937344 complement component 1, q subcomponent-like 2 [Homo... 108 4e-24
gi|5729785 complement component 1, q subcomponent-like 1 [Homo s... 105 3e-23
gi|13569919 C1q and tumor necrosis factor related protein 3 isof... 100 1e-21
gi|62739183 C1q and tumor necrosis factor related protein 3 isof... 100 1e-21
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 89 5e-18
gi|148886696 surfactant protein A2 [Homo sapiens] 87 1e-17
gi|146149162 surfactant, pulmonary-associated protein A2 [Homo s... 87 1e-17
gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens] 87 1e-17
gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens] 87 1e-17
gi|5901944 elastin microfibril interfacer 1 [Homo sapiens] 87 2e-17
gi|29725624 collagen, type XXIII, alpha 1 [Homo sapiens] 86 2e-17
>gi|14149712 C1q and tumor necrosis factor related protein 5
precursor [Homo sapiens]
Length = 243
Score = 514 bits (1325), Expect = e-146
Identities = 243/243 (100%), Positives = 243/243 (100%)
Query: 1 MRPLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPG 60
MRPLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPG
Sbjct: 1 MRPLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPG 60
Query: 61 APGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSD 120
APGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSD
Sbjct: 61 APGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSD 120
Query: 121 APLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASLQFDLVKNGESIASFFQ 180
APLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASLQFDLVKNGESIASFFQ
Sbjct: 121 APLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASLQFDLVKNGESIASFFQ 180
Query: 181 FFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIKTDSTFSGFLVYSDWHSSP 240
FFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIKTDSTFSGFLVYSDWHSSP
Sbjct: 181 FFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIKTDSTFSGFLVYSDWHSSP 240
Query: 241 VFA 243
VFA
Sbjct: 241 VFA 243
>gi|4757760 adiponectin precursor [Homo sapiens]
Length = 244
Score = 157 bits (398), Expect = 6e-39
Identities = 93/212 (43%), Positives = 118/212 (55%), Gaps = 19/212 (8%)
Query: 34 LPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGD---------PGPRG 84
+ G PGH G G PGRDGRD G PGEKGE G PGL GP+GD GPRG
Sbjct: 40 MAGIPGHPGHNGAPGRDGRD------GTPGEKGEKGDPGLIGPKGDIGETGVPGAEGPRG 93
Query: 85 EAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFT 144
G G G GE + RSAFS E+ V P + P+ F ++ N+Q HYD TGKF
Sbjct: 94 FPGIQGRKGEPGEGAYVYRSAFSV-GLETYVTIP-NMPIRFTKIFYNQQNHYDGSTGKFH 151
Query: 145 CQVPGVYYFAVHATVYRASLQFDLVKNGESIASFFQFFGGWPKPASLSGGAMVRLEPEDQ 204
C +PG+YYFA H TVY ++ L K +++ + + SG ++ LE DQ
Sbjct: 152 CNIPGLYYFAYHITVYMKDVKVSLFKKDKAMLFTYDQYQE-NNVDQASGSVLLHLEVGDQ 210
Query: 205 VWVQV-GVGDYIGIYASIKTDSTFSGFLVYSD 235
VW+QV G G+ G+YA DSTF+GFL+Y D
Sbjct: 211 VWLQVYGEGERNGLYADNDNDSTFTGFLLYHD 242
>gi|65301115 C1q and tumor necrosis factor related protein 9 [Homo
sapiens]
Length = 333
Score = 154 bits (389), Expect = 7e-38
Identities = 95/245 (38%), Positives = 124/245 (50%), Gaps = 42/245 (17%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKG----------EG----------- 68
G G G+PG HG +GL G G G G G G+KG EG
Sbjct: 89 GDQGSRGSPGKHGPKGLAGPMGEKGLRGETGPQGQKGNKGDVGPTGPEGPRGNIGPLGPT 148
Query: 69 GRPGLPGPRGDPGPRGEAGPAGPTGPAG------------------ECSVPPRSAFSAKR 110
G PG GP G PGP+GEAGP GP G G E V P+SAF+
Sbjct: 149 GLPGPMGPIGKPGPKGEAGPTGPQGEPGVRGIRGWKGDRGEKGKIGETLVLPKSAFTVGL 208
Query: 111 SESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASLQFDLVK 170
+ P SD P+ FD++L NE HYD GKFTC + GVYYF H TV+ ++Q LVK
Sbjct: 209 TVLSKFPSSDMPIKFDKILYNEFNHYDTAAGKFTCHIAGVYYFTYHITVFSRNVQVSLVK 268
Query: 171 NGESIASFFQFFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGD-YIGIYASIKTDSTFSG 229
NG I + A SGG +++L+ D+VW+QV G+ + G++A D+TF+G
Sbjct: 269 NGVKILHTKDAYMSSEDQA--SGGIVLQLKLGDEVWLQVTGGERFNGLFADEDDDTTFTG 326
Query: 230 FLVYS 234
FL++S
Sbjct: 327 FLLFS 331
Score = 73.2 bits (178), Expect = 2e-13
Identities = 37/67 (55%), Positives = 41/67 (61%), Gaps = 6/67 (8%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPA 89
GHPG+PG PGH+G LPGR DGRDGA G G+ GE GRPG PG G G +GE G
Sbjct: 26 GHPGIPGNPGHNG---LPGR---DGRDGAKGDKGDAGEPGRPGSPGKDGTSGEKGERGAD 79
Query: 90 GPTGPAG 96
G G
Sbjct: 80 GKVEAKG 86
Score = 71.2 bits (173), Expect = 7e-13
Identities = 33/68 (48%), Positives = 40/68 (58%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPA 89
G PG PG+PG G+ G G G DG+ A G G++G G PG GP+G GP GE G
Sbjct: 56 GEPGRPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGPMGEKGLR 115
Query: 90 GPTGPAGE 97
G TGP G+
Sbjct: 116 GETGPQGQ 123
Score = 66.6 bits (161), Expect = 2e-11
Identities = 34/74 (45%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 29 PGHPGLPGTPGHHGSQ------GLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGP 82
PGH GLPG G G++ G PGR G G+DG G GE+G G+ G +GD G
Sbjct: 34 PGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGS 93
Query: 83 RGEAGPAGPTGPAG 96
RG G GP G AG
Sbjct: 94 RGSPGKHGPKGLAG 107
Score = 43.5 bits (101), Expect = 2e-04
Identities = 21/45 (46%), Positives = 22/45 (48%)
Query: 52 RDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAG 96
R G G PG PG G GR G G +GD G GE G G G G
Sbjct: 24 RQGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPGKDG 68
Score = 32.7 bits (73), Expect = 0.29
Identities = 17/37 (45%), Positives = 18/37 (48%)
Query: 65 KGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVP 101
+G G PG PG G PG G G G G AGE P
Sbjct: 25 QGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRP 61
Score = 30.0 bits (66), Expect = 1.9
Identities = 16/45 (35%), Positives = 18/45 (40%)
Query: 69 GRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSES 113
G PG+PG G G G G G G G+ P R K S
Sbjct: 26 GHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPGKDGTS 70
>gi|13994280 C1q and tumor necrosis factor related protein 7 isoform
b [Homo sapiens]
Length = 289
Score = 153 bits (386), Expect = 1e-37
Identities = 95/238 (39%), Positives = 121/238 (50%), Gaps = 35/238 (14%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAP---------------GAPGEKGEGGRPGL 73
PG PG G+PG HG GLPGRDGRDGR G G GEKG+ G G
Sbjct: 43 PGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGK 102
Query: 74 PGPRGDPGPRGEAGPAGPTGPAGE------------C---SVPPRSAFSAKRSESRVPPP 118
GP G G +GE GP GP GP G+ C S+ +SAFS + S P
Sbjct: 103 KGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSY--PE 160
Query: 119 SDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASLQFDLVKNGESIASF 178
P+ F++VL NE HY+ TGKF C PG+YYF+ T+ L LV NG+
Sbjct: 161 ERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKT 220
Query: 179 FQFFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIK-TDSTFSGFLVYSD 235
F G A SG ++ L+PED+VW+++ D G+++ DS FSGFL+Y D
Sbjct: 221 FDANTGNHDVA--SGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVD 276
>gi|206597454 C1q and tumor necrosis factor related protein 7
isoform b [Homo sapiens]
Length = 289
Score = 153 bits (386), Expect = 1e-37
Identities = 95/238 (39%), Positives = 121/238 (50%), Gaps = 35/238 (14%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAP---------------GAPGEKGEGGRPGL 73
PG PG G+PG HG GLPGRDGRDGR G G GEKG+ G G
Sbjct: 43 PGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGK 102
Query: 74 PGPRGDPGPRGEAGPAGPTGPAGE------------C---SVPPRSAFSAKRSESRVPPP 118
GP G G +GE GP GP GP G+ C S+ +SAFS + S P
Sbjct: 103 KGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSY--PE 160
Query: 119 SDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASLQFDLVKNGESIASF 178
P+ F++VL NE HY+ TGKF C PG+YYF+ T+ L LV NG+
Sbjct: 161 ERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKT 220
Query: 179 FQFFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIK-TDSTFSGFLVYSD 235
F G A SG ++ L+PED+VW+++ D G+++ DS FSGFL+Y D
Sbjct: 221 FDANTGNHDVA--SGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVD 276
>gi|206597452 C1q and tumor necrosis factor related protein 7
isoform a [Homo sapiens]
Length = 296
Score = 153 bits (386), Expect = 1e-37
Identities = 95/238 (39%), Positives = 121/238 (50%), Gaps = 35/238 (14%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAP---------------GAPGEKGEGGRPGL 73
PG PG G+PG HG GLPGRDGRDGR G G GEKG+ G G
Sbjct: 50 PGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGK 109
Query: 74 PGPRGDPGPRGEAGPAGPTGPAGE------------C---SVPPRSAFSAKRSESRVPPP 118
GP G G +GE GP GP GP G+ C S+ +SAFS + S P
Sbjct: 110 KGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSY--PE 167
Query: 119 SDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASLQFDLVKNGESIASF 178
P+ F++VL NE HY+ TGKF C PG+YYF+ T+ L LV NG+
Sbjct: 168 ERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKT 227
Query: 179 FQFFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIK-TDSTFSGFLVYSD 235
F G A SG ++ L+PED+VW+++ D G+++ DS FSGFL+Y D
Sbjct: 228 FDANTGNHDVA--SGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVD 283
>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
Length = 680
Score = 152 bits (383), Expect = 3e-37
Identities = 91/237 (38%), Positives = 123/237 (51%), Gaps = 21/237 (8%)
Query: 15 GSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPG-----RDGRDGRDGAPGAPGEKGEGG 69
G+P + + P PG PG PG+ G GS G PG G +G G PG PG +G G
Sbjct: 443 GAPGIPGTRGPIGPPGIPGFPGSKGDPGSPGPPGPAGIATKGLNGPTGPPGPPGPRGHSG 502
Query: 70 RPGLPGPRGDPGPRGEAG-PAGPTGPAGECSVPPRSAFSAKRSESRVP------------ 116
PGLPGP G PGP G+A P G S+ SA + + +P
Sbjct: 503 EPGLPGPPGPPGPPGQAVMPEGFIKAGQRPSLSGTPLVSANQGVTGMPVSAFTVILSKAY 562
Query: 117 PPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASLQFDLVKNGESIA 176
P P+PFD++L N Q HYD TG FTCQ+PG+YYF+ H V + L KNG +
Sbjct: 563 PAIGTPIPFDKILYNRQQHYDPRTGIFTCQIPGIYYFSYHVHVKGTHVWVGLYKNGTPVM 622
Query: 177 -SFFQFFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIKTDSTFSGFLV 232
++ ++ G+ A SG A++ L DQVW+Q+ + G+Y+S S+FSGFLV
Sbjct: 623 YTYDEYTKGYLDQA--SGSAIIDLTENDQVWLQLPNAESNGLYSSEYVHSSFSGFLV 677
Score = 80.5 bits (197), Expect = 1e-15
Identities = 48/132 (36%), Positives = 57/132 (43%), Gaps = 30/132 (22%)
Query: 15 GSPPLDDNKIPSLCPGHPGLPGTPGH---------HGSQGLP------------------ 47
G P + P+ PG PGL G PG+ GS GLP
Sbjct: 317 GGPGAKGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAK 376
Query: 48 ---GRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRS 104
G G DG+ G PG PG G G PGLPGP+GDPG G G GP GPAG +P +
Sbjct: 377 GERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHN 436
Query: 105 AFSAKRSESRVP 116
+ R +P
Sbjct: 437 GEAGPRGAPGIP 448
Score = 77.0 bits (188), Expect = 1e-14
Identities = 42/104 (40%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Query: 15 GSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLP 74
GSP D PG+PG PG G G+ GLPG G G G PG PG G G G+P
Sbjct: 380 GSPGSDGK------PGYPGKPGLDGPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMP 433
Query: 75 GPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPP 118
G G+ GPRG G G GP G +P F + + P P
Sbjct: 434 GHNGEAGPRGAPGIPGTRGPIGPPGIP---GFPGSKGDPGSPGP 474
Score = 74.7 bits (182), Expect = 7e-14
Identities = 45/104 (43%), Positives = 47/104 (45%), Gaps = 16/104 (15%)
Query: 13 AAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPG 72
A G P + K PG G PG PG G GLPG G G G PG PG KGE G G
Sbjct: 271 APGQPGIPGTKGLPGAPGIAGPPGPPGF-GKPGLPGLKGERGPAGLPGGPGAKGEQGPAG 329
Query: 73 LPG---------------PRGDPGPRGEAGPAGPTGPAGECSVP 101
LPG P+G PG G GP G TGPAG P
Sbjct: 330 LPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYP 373
Score = 73.9 bits (180), Expect = 1e-13
Identities = 37/76 (48%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPG---------LPGPRGDP 80
G PGLPG G G GLPG G G G G PG+ G G PG +PG G P
Sbjct: 299 GKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLP 358
Query: 81 GPRGEAGPAGPTGPAG 96
GP+GE GPAGP G G
Sbjct: 359 GPKGETGPAGPAGYPG 374
Score = 73.6 bits (179), Expect = 2e-13
Identities = 45/105 (42%), Positives = 52/105 (49%), Gaps = 20/105 (19%)
Query: 25 PSLCPGHPGLPGTPGHHGSQGL--PGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGD--- 79
P+ PG G PG PG G G+ PG+ G+ G GAPG G GE G PG+PG G
Sbjct: 131 PAGLPGPRGPPGPPGIPGPAGISVPGKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGE 190
Query: 80 --------PGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVP 116
PG RG GP GPTGP+G V KR E+ VP
Sbjct: 191 MGYGAPGRPGERGLPGPQGPTGPSGPPGV-------GKRGENGVP 228
Score = 72.0 bits (175), Expect = 4e-13
Identities = 43/82 (52%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 25 PSLCPGHPGLPGTPGHHGSQGLPGRDG-----RDGRDGAPGAPGEKGEGGRPGLPGPRGD 79
PS PG PG G+PG G GLPG G + G G PG PGE+G G G GP G
Sbjct: 76 PSGPPGKPGY-GSPGLQGEPGLPGPPGPSAVGKPGVPGLPGKPGERGPYGPKGDVGPAGL 134
Query: 80 PGPRGEAGPAGPTGPAGECSVP 101
PGPRG GP G GPAG SVP
Sbjct: 135 PGPRGPPGPPGIPGPAG-ISVP 155
Score = 70.5 bits (171), Expect = 1e-12
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDG--RDGAPGAPGEKGEGGRPGLPGPRGDPGPRGE- 85
PG PG+PGT G G+ G+ G G G + G PG GE+G G PG PG +G+ GP G
Sbjct: 272 PGQPGIPGTKGLPGAPGIAGPPGPPGFGKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLP 331
Query: 86 -----AGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAP 122
GP G GP G +P + E+ P+ P
Sbjct: 332 GKPGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYP 373
Score = 69.3 bits (168), Expect = 3e-12
Identities = 37/79 (46%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 29 PGHPGLPG--------TPGHHGSQGLPGRDGRDGRDGAPGAP--GEKGEGGRPGLPGPRG 78
PG PG+ G PG G +GLPG G G G PG GE G G+PG+ G RG
Sbjct: 179 PGVPGMNGQKGEMGYGAPGRPGERGLPGPQGPTGPSGPPGVGKRGENGVPGQPGIKGDRG 238
Query: 79 DPGPRGEAGPAGPTGPAGE 97
PG G GP GP GP GE
Sbjct: 239 FPGEMGPIGPPGPQGPPGE 257
Score = 68.2 bits (165), Expect = 6e-12
Identities = 34/65 (52%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGP 88
PG GLPG G G G PG G+ G +G PG PG KG+ G PG GP G PGP+G G
Sbjct: 199 PGERGLPGPQGPTGPSGPPGV-GKRGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGE 257
Query: 89 AGPTG 93
GP G
Sbjct: 258 RGPEG 262
Score = 65.1 bits (157), Expect = 5e-11
Identities = 35/75 (46%), Positives = 41/75 (54%), Gaps = 11/75 (14%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKG-EG----------GRPGLPGPRG 78
G G+PG PG G +G PG G G G G PGE+G EG G+PG+PG +G
Sbjct: 223 GENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEGIGKPGAAGAPGQPGIPGTKG 282
Query: 79 DPGPRGEAGPAGPTG 93
PG G AGP GP G
Sbjct: 283 LPGAPGIAGPPGPPG 297
Score = 61.6 bits (148), Expect = 6e-10
Identities = 42/114 (36%), Positives = 46/114 (40%), Gaps = 4/114 (3%)
Query: 15 GSPPLDDNKIPSLC--PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPG 72
G P L PS PG PGLPG PG G G G G G G G PG G G G
Sbjct: 92 GEPGLPGPPGPSAVGKPGVPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAG 151
Query: 73 L--PGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAPLP 124
+ PG G GP G GP G G G VP + + P + LP
Sbjct: 152 ISVPGKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYGAPGRPGERGLP 205
Score = 60.5 bits (145), Expect = 1e-09
Identities = 35/80 (43%), Positives = 40/80 (50%), Gaps = 16/80 (20%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGP------- 82
G PG G PG G +G+ G+ G GAPG PG G G PG PG G PGP
Sbjct: 247 GPPGPQGPPGERGPEGI----GKPGAAGAPGQPGIPGTKGLPGAPGIAGPPGPPGFGKPG 302
Query: 83 ----RGEAGPAG-PTGPAGE 97
+GE GPAG P GP +
Sbjct: 303 LPGLKGERGPAGLPGGPGAK 322
Score = 47.0 bits (110), Expect = 2e-05
Identities = 40/112 (35%), Positives = 51/112 (45%), Gaps = 19/112 (16%)
Query: 3 PLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGT------PGHHGSQGLPGRDGRDGRD 56
P L+L+ L L G + ++P+ G LP T P S+G+ R G
Sbjct: 6 PFLLLVSLNLVHGVFYAERYQMPTGIKGP--LPNTKTQFFIPYTIKSKGIAVR----GEQ 59
Query: 57 GAPGAPGEKGEGGRPGLPGP-----RGDPGPRGEAGPAGPTGPA--GECSVP 101
G PG PG G G PG GP G PG +GE G GP GP+ G+ VP
Sbjct: 60 GTPGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGPSAVGKPGVP 111
Score = 29.6 bits (65), Expect = 2.5
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 77 RGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAK--RSESRVPPP 118
RG+ G G GPAGP G G P + + + + E +P P
Sbjct: 56 RGEQGTPGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGP 99
>gi|56847616 C1q and tumor necrosis factor related protein 9B [Homo
sapiens]
Length = 333
Score = 151 bits (381), Expect = 6e-37
Identities = 93/245 (37%), Positives = 123/245 (50%), Gaps = 42/245 (17%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKG----------EG----------- 68
G G G+PG HG +GL G G G G G G+KG EG
Sbjct: 89 GDQGSRGSPGKHGPKGLAGPMGEKGLRGETGPQGQKGNKGDVGPTGPEGPRGNIGPLGPT 148
Query: 69 GRPGLPGPRGDPGPRGEAGPAGPTGPAG------------------ECSVPPRSAFSAKR 110
G PG GP G PGP+GEAGP GP G G E V P+SAF+
Sbjct: 149 GLPGPMGPIGKPGPKGEAGPTGPQGEPGVRGIRGWKGDRGEKGKIGETLVLPKSAFTVGL 208
Query: 111 SESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASLQFDLVK 170
+ P SD P+ FD++L NE HYD GKFTC + GVYYF H TV+ ++Q LVK
Sbjct: 209 TVLSKFPSSDVPIKFDKILYNEFNHYDTAVGKFTCHIAGVYYFTYHITVFSRNVQVSLVK 268
Query: 171 NGESIASFFQFFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGD-YIGIYASIKTDSTFSG 229
NG I + A SG +++L+ D++W+QV G+ + G++A D+TF+G
Sbjct: 269 NGVKILHTRDAYVSSEDQA--SGSIVLQLKLGDEMWLQVTGGERFNGLFADEDDDTTFTG 326
Query: 230 FLVYS 234
FL++S
Sbjct: 327 FLLFS 331
Score = 72.4 bits (176), Expect = 3e-13
Identities = 44/101 (43%), Positives = 49/101 (48%), Gaps = 36/101 (35%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRD---------GRDGAPGAP------GEKGE------- 67
GHPG+PG PGH+ GLPGRDGRD G G PG+P GEKGE
Sbjct: 26 GHPGIPGNPGHN---GLPGRDGRDGAKGDKGDAGEPGCPGSPGKDGTSGEKGERGADGKV 82
Query: 68 -----------GGRPGLPGPRGDPGPRGEAGPAGPTGPAGE 97
G PG GP+G GP GE G G TGP G+
Sbjct: 83 EAKGIKGDQGSRGSPGKHGPKGLAGPMGEKGLRGETGPQGQ 123
Score = 43.1 bits (100), Expect = 2e-04
Identities = 21/45 (46%), Positives = 22/45 (48%)
Query: 52 RDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAG 96
R G G PG PG G GR G G +GD G GE G G G G
Sbjct: 24 RQGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGCPGSPGKDG 68
Score = 40.8 bits (94), Expect = 0.001
Identities = 19/43 (44%), Positives = 22/43 (51%)
Query: 55 RDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGE 97
R G PG PG G G PG G G G +G+AG G G G+
Sbjct: 24 RQGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGCPGSPGK 66
Score = 33.5 bits (75), Expect = 0.17
Identities = 17/37 (45%), Positives = 18/37 (48%)
Query: 65 KGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVP 101
+G G PG PG G PG G G G G AGE P
Sbjct: 25 QGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGCP 61
>gi|56786155 complement component 1, q subcomponent, C chain
precursor [Homo sapiens]
Length = 245
Score = 149 bits (377), Expect = 2e-36
Identities = 97/245 (39%), Positives = 130/245 (53%), Gaps = 22/245 (8%)
Query: 1 MRPLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPG 60
++ LL+LLLL L + N PG PGLPG PG G GLPG G G PG
Sbjct: 13 LKLLLLLLLLPLRGQA-----NTGCYGIPGMPGLPGAPGKDGYDGLPGPKGEPGIPAIPG 67
Query: 61 APGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPP---------RSAFSAKRS 111
G KG+ G PGLPG G GP G G G GP G P +S F+ R
Sbjct: 68 IRGPKGQKGEPGLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEGRYKQKFQSVFTVTR- 126
Query: 112 ESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASLQFDLVKN 171
++ PP ++ + F+ VL N QG YD TGKFTC+VPG+YYF HA+ + A+L L ++
Sbjct: 127 QTHQPPAPNSLIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFVYHAS-HTANLCVLLYRS 185
Query: 172 GESIASFFQFFGGWPKPASL-SGGAMVRLEPEDQVWVQVGVGDYIGIYASIKTDSTFSGF 230
G + + F G K + SGG ++RL+ ++VW + V DY + +DS FSGF
Sbjct: 186 GVKVVT---FCGHTSKTNQVNSGGVLLRLQVGEEVW--LAVNDYYDMVGIQGSDSVFSGF 240
Query: 231 LVYSD 235
L++ D
Sbjct: 241 LLFPD 245
>gi|166235903 complement component 1, q subcomponent, C chain
precursor [Homo sapiens]
Length = 245
Score = 149 bits (377), Expect = 2e-36
Identities = 97/245 (39%), Positives = 130/245 (53%), Gaps = 22/245 (8%)
Query: 1 MRPLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPG 60
++ LL+LLLL L + N PG PGLPG PG G GLPG G G PG
Sbjct: 13 LKLLLLLLLLPLRGQA-----NTGCYGIPGMPGLPGAPGKDGYDGLPGPKGEPGIPAIPG 67
Query: 61 APGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPP---------RSAFSAKRS 111
G KG+ G PGLPG G GP G G G GP G P +S F+ R
Sbjct: 68 IRGPKGQKGEPGLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEGRYKQKFQSVFTVTR- 126
Query: 112 ESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASLQFDLVKN 171
++ PP ++ + F+ VL N QG YD TGKFTC+VPG+YYF HA+ + A+L L ++
Sbjct: 127 QTHQPPAPNSLIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFVYHAS-HTANLCVLLYRS 185
Query: 172 GESIASFFQFFGGWPKPASL-SGGAMVRLEPEDQVWVQVGVGDYIGIYASIKTDSTFSGF 230
G + + F G K + SGG ++RL+ ++VW + V DY + +DS FSGF
Sbjct: 186 GVKVVT---FCGHTSKTNQVNSGGVLLRLQVGEEVW--LAVNDYYDMVGIQGSDSVFSGF 240
Query: 231 LVYSD 235
L++ D
Sbjct: 241 LLFPD 245
>gi|122937273 hypothetical protein LOC131149 [Homo sapiens]
Length = 477
Score = 148 bits (373), Expect = 5e-36
Identities = 90/219 (41%), Positives = 120/219 (54%), Gaps = 18/219 (8%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAP---GEKGEGGRPGLPGPRGDPGPRGEA 86
G G+ G G G G+ G+ GR+G GA G P GEKGE G PGL GP G G G
Sbjct: 257 GEGGMKGEKGSKGDSGMEGKSGRNGLPGAKGDPGIKGEKGELGPPGLLGPTGPKGDIGNK 316
Query: 87 GPAGPT---------GPAGECSVPPRSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYD 137
G GPT G GE + PRSAFSA S+ PP + P+ F+++L N+QG+Y
Sbjct: 317 GVRGPTGKKGSRGFKGSKGELARVPRSAFSA--GLSKPFPPPNIPIKFEKILYNDQGNYS 374
Query: 138 AVTGKFTCQVPGVYYFAVHATVYRASLQFDLV-KNGESIASFFQFFGGWPKPASLSGGAM 196
VTGKF C +PG Y F+ H TV + LV +N + S +G ASL +
Sbjct: 375 PVTGKFNCSIPGTYVFSYHITVRGRPARISLVAQNKKQFKSRETLYGQEIDQASLL--VI 432
Query: 197 VRLEPEDQVWVQVGVGDYIGIYASIKTDSTFSGFLVYSD 235
++L DQVW++V D+ G+Y S + DS F+GFL+Y +
Sbjct: 433 LKLSAGDQVWLEVS-KDWNGVYVSAEDDSIFTGFLLYPE 470
Score = 60.8 bits (146), Expect = 1e-09
Identities = 33/71 (46%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKG---EGGRPGLPGPRGDPGPRGE 85
PG G PG G G+ G+PG G G G G GEKG E G G+PG G PG +GE
Sbjct: 115 PGETGQPGPKGEAGNLGIPGPPGVVGPQGPRGYKGEKGLKGERGDQGVPGYPGKPGAQGE 174
Query: 86 AGPAGPTGPAG 96
GP G G G
Sbjct: 175 PGPKGDKGNIG 185
Score = 58.2 bits (139), Expect = 7e-09
Identities = 33/83 (39%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 21 DNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPG------APGEKGEGGRPGLP 74
D +P PG PG G PG G +G G G G+ G+ G GEKG+ G G P
Sbjct: 159 DQGVPGY-PGKPGAQGEPGPKGDKGNIGLGGVKGQKGSKGDTCGNCTKGEKGDQGAMGSP 217
Query: 75 GPRGDPGPRGEAGPAGPTGPAGE 97
G G PG +GE G G G G+
Sbjct: 218 GLHGGPGAKGEKGEMGEKGEMGD 240
Score = 57.4 bits (137), Expect = 1e-08
Identities = 29/68 (42%), Positives = 33/68 (48%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPA 89
G PG PG G G +G G G G G G PG G+ G G PGP+GD G G G
Sbjct: 131 GIPGPPGVVGPQGPRGYKGEKGLKGERGDQGVPGYPGKPGAQGEPGPKGDKGNIGLGGVK 190
Query: 90 GPTGPAGE 97
G G G+
Sbjct: 191 GQKGSKGD 198
Score = 56.6 bits (135), Expect = 2e-08
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPA 89
G+ G+PG PG G Q G G G G G G++G G PG PG +G+PGP+G+ G
Sbjct: 128 GNLGIPGPPGVVGPQ---GPRGYKGEKGLKGERGDQGVPGYPGKPGAQGEPGPKGDKGNI 184
Query: 90 GPTGPAGE 97
G G G+
Sbjct: 185 GLGGVKGQ 192
Score = 53.9 bits (128), Expect = 1e-07
Identities = 28/73 (38%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPG------PR 83
G+ G G G G QG+PG G+ G G PG G+KG G G+ G +G G +
Sbjct: 146 GYKGEKGLKGERGDQGVPGYPGKPGAQGEPGPKGDKGNIGLGGVKGQKGSKGDTCGNCTK 205
Query: 84 GEAGPAGPTGPAG 96
GE G G G G
Sbjct: 206 GEKGDQGAMGSPG 218
Score = 52.4 bits (124), Expect = 4e-07
Identities = 26/56 (46%), Positives = 29/56 (51%)
Query: 46 LPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVP 101
+PG+ G G G PG GE G G PG PG G GPRG G G G G+ VP
Sbjct: 108 VPGQKGEPGETGQPGPKGEAGNLGIPGPPGVVGPQGPRGYKGEKGLKGERGDQGVP 163
Score = 52.4 bits (124), Expect = 4e-07
Identities = 32/87 (36%), Positives = 36/87 (41%), Gaps = 18/87 (20%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEG------------------GRP 71
G G+PG PG G+QG PG G G G G G+KG G P
Sbjct: 158 GDQGVPGYPGKPGAQGEPGPKGDKGNIGLGGVKGQKGSKGDTCGNCTKGEKGDQGAMGSP 217
Query: 72 GLPGPRGDPGPRGEAGPAGPTGPAGEC 98
GL G G G +GE G G G G C
Sbjct: 218 GLHGGPGAKGEKGEMGEKGEMGDKGCC 244
Score = 48.5 bits (114), Expect = 5e-06
Identities = 22/55 (40%), Positives = 27/55 (49%)
Query: 62 PGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVP 116
PG+KGE G G PGP+G+ G G GP G GP G +R + VP
Sbjct: 109 PGQKGEPGETGQPGPKGEAGNLGIPGPPGVVGPQGPRGYKGEKGLKGERGDQGVP 163
>gi|94818738 C1q and tumor necrosis factor related protein 2 [Homo
sapiens]
Length = 330
Score = 148 bits (373), Expect = 5e-36
Identities = 90/239 (37%), Positives = 119/239 (49%), Gaps = 37/239 (15%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGP 88
PG PG PG G G G PG+DG+DG DG G + GE G PG G RG PGP+G+AG
Sbjct: 90 PGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRG---DSGEEGPPGRTGNRGKPGPKGKAGA 146
Query: 89 ---AGPTGP------AGECSVPPRSAFSAKRSESRVPPPSDA------------------ 121
AGP GP G+ P + K+ E +P P
Sbjct: 147 IGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGPCSCGSGHTKSAFSVAVTKSYP 206
Query: 122 ----PLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASLQFDLVKNGESIAS 177
P+ FD++L+NE GHY+A +GKF C VPG+YYF T+ L LV NG+
Sbjct: 207 RERLPIKFDKILMNEGGHYNASSGKFVCGVPGIYYFTYDITLANKHLAIGLVHNGQYRIR 266
Query: 178 FFQFFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGI-YASIKTDSTFSGFLVYSD 235
F G A SG ++ L+ D+VW+Q+ + G+ Y TDS F+GFL+Y+D
Sbjct: 267 TFDANTGNHDVA--SGSTILALKQGDEVWLQIFYSEQNGLFYDPYWTDSLFTGFLIYAD 323
>gi|87298828 complement component 1, q subcomponent, B chain
precursor [Homo sapiens]
Length = 253
Score = 138 bits (348), Expect = 4e-33
Identities = 90/242 (37%), Positives = 123/242 (50%), Gaps = 14/242 (5%)
Query: 4 LLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPG 63
L++LLLLGL S P PG PG+PGTPG G G PG G G G G G
Sbjct: 13 LMLLLLLGLIDISQAQLSCTGPPAIPGIPGIPGTPGPDGQPGTPGIKGEKGLPGLAGDHG 72
Query: 64 EKGEGGRPGLPGPRGDPGPRGEAGP---------AGPTGPAGECSVPPRSAFSAKRSESR 114
E GE G PG+PG G GP+G GP GP G +G+ + AFSA R+
Sbjct: 73 EFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDYKATQKIAFSATRT-IN 131
Query: 115 VPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASLQFDLVKNGES 174
VP D + FD V+ N +Y+ +GKFTC+VPG+YYF HA+ R +L +L++ E
Sbjct: 132 VPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYHAS-SRGNLCVNLMRGRER 190
Query: 175 IASFFQFFG-GWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIKTDSTFSGFLVY 233
F + +GG +++LE + V++Q D + +S FSGFL++
Sbjct: 191 AQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQ--ATDKNSLLGMEGANSIFSGFLLF 248
Query: 234 SD 235
D
Sbjct: 249 PD 250
>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
Length = 703
Score = 137 bits (344), Expect = 1e-32
Identities = 93/241 (38%), Positives = 118/241 (48%), Gaps = 25/241 (10%)
Query: 11 GLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGR 70
GL + P+ +P L G PGLPG PG G G PG G G G PG+PG G G
Sbjct: 466 GLQGPAGPIGPQGLPGL-KGEPGLPGPPGE-GRAGEPGTAGPTGPPGVPGSPGITGPPGP 523
Query: 71 PGLPGPRGDPGPRGEAGPAG------------------PTGPAGECSVPPRSAFSAKRSE 112
PG PGP G PG E G AG P GE S AF+A +
Sbjct: 524 PGPPGPPGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTS 583
Query: 113 SRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASLQFDLVKNG 172
P S P+ FDR L N Y+ TG FTC V GVYYFA H V ++ L KN
Sbjct: 584 PF--PASGMPVKFDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNN 641
Query: 173 -ESIASFFQFFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIKTDSTFSGFL 231
+ ++ ++ G+ A SGGA+++L P DQVWVQ+ G+Y++ S+FSGFL
Sbjct: 642 VPATYTYDEYKKGYLDQA--SGGAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSFSGFL 699
Query: 232 V 232
+
Sbjct: 700 L 700
Score = 85.5 bits (210), Expect = 4e-17
Identities = 46/97 (47%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDG-----RDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRG 84
G PGLPG PG G+ G PG G + G DG PGAPG+KGE G PG+PGPRG+PG G
Sbjct: 211 GQPGLPGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVG 270
Query: 85 EAGPAG--PTGPAGECSVP-PRSAFSAKRSESRVPPP 118
GP G G G +P P+ AK PP
Sbjct: 271 PKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPP 307
Score = 77.0 bits (188), Expect = 1e-14
Identities = 40/76 (52%), Positives = 43/76 (56%), Gaps = 9/76 (11%)
Query: 30 GHPGLPGTPGHHGSQGLPGR---DGRDGRDGAPGAPGEKGEGGRPGLPGP------RGDP 80
G PGLPG G G G+PG G G DG PG G +G GG PGLPG RG P
Sbjct: 316 GMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPP 375
Query: 81 GPRGEAGPAGPTGPAG 96
GP+GEAGP GP G G
Sbjct: 376 GPKGEAGPGGPPGVPG 391
Score = 75.9 bits (185), Expect = 3e-14
Identities = 43/89 (48%), Positives = 44/89 (49%), Gaps = 21/89 (23%)
Query: 30 GHPGLPGTPGHHGSQGL------PGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPR 83
G PG G PG G QGL PG G GR G PG GE G GG PG+PG RGD GP
Sbjct: 340 GEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPS 399
Query: 84 GEAG---------------PAGPTGPAGE 97
G AG P GPTGP GE
Sbjct: 400 GLAGKPGVPGERGLPGAHGPPGPTGPKGE 428
Score = 73.6 bits (179), Expect = 2e-13
Identities = 45/116 (38%), Positives = 53/116 (45%), Gaps = 9/116 (7%)
Query: 15 GSPPLDDNKIPSLCPGHPGLPGT---------PGHHGSQGLPGRDGRDGRDGAPGAPGEK 65
G P + ++ PS G PG+PG PG G +G PG GR G G GA G+K
Sbjct: 388 GVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQK 447
Query: 66 GEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDA 121
G+ G PG PG RG G G GPAGP GP G + E R P A
Sbjct: 448 GDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPGTA 503
Score = 72.4 bits (176), Expect = 3e-13
Identities = 46/113 (40%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Query: 14 AGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGA--PGEKGEGGRP 71
AG P L P PG PGL G PG G QGL G G G G G PG+ G G P
Sbjct: 125 AGPPGLPGKVGP---PGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQGVP 181
Query: 72 GLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAPLP 124
G PG +G+PGP+GE GP G G G+ V + + P P P P
Sbjct: 182 GPPGFQGEPGPQGEPGPPGDRGLKGDNGV-GQPGLPGAPGQGGAPGPPGLPGP 233
Score = 71.6 bits (174), Expect = 6e-13
Identities = 35/73 (47%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGE------GGRPGLPGPRGDPGPR 83
G PGLPG+ G G +G PG G G G PG PG +G+ G+PG+PG RG PG
Sbjct: 358 GPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAH 417
Query: 84 GEAGPAGPTGPAG 96
G GP GP G G
Sbjct: 418 GPPGPTGPKGEPG 430
Score = 71.2 bits (173), Expect = 7e-13
Identities = 39/85 (45%), Positives = 43/85 (50%), Gaps = 16/85 (18%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGA-----PGAPGEKGEGGRPGLPGPR------ 77
PG PG G PG G G PG G G +G PGAPG+ G G PGLPGP
Sbjct: 181 PGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGKPG 240
Query: 78 -----GDPGPRGEAGPAGPTGPAGE 97
G PG +GE+GP G GP GE
Sbjct: 241 LDGLPGAPGDKGESGPPGVPGPRGE 265
Score = 67.4 bits (163), Expect = 1e-11
Identities = 40/93 (43%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 15 GSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLP 74
G P L K G PGL G G G G PG G G G PG PG G GR G P
Sbjct: 316 GMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPP 375
Query: 75 GPRGDPGPRGE------AGPAGPTGPAGECSVP 101
GP+G+ GP G G GP+G AG+ VP
Sbjct: 376 GPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVP 408
Score = 67.0 bits (162), Expect = 1e-11
Identities = 36/90 (40%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDG--------RDGAPGAPGEKGEGGRPGLPGPRGDP 80
PG GLPG G G++G PG G G G PG G++G G PGL G RG+P
Sbjct: 283 PGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEP 342
Query: 81 GPRGEAGPAGPTGPAGECSVPPRSAFSAKR 110
G GE G GP G G +P + +R
Sbjct: 343 GEDGEPGEQGPQGLGGPPGLPGSAGLPGRR 372
Score = 64.3 bits (155), Expect = 9e-11
Identities = 36/73 (49%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGA---PGAPGEKGEG--GRPGLPGPRGDPGPR 83
PG GLPG PG G G PG G G GA G PG G G G GLPGP+G G +
Sbjct: 239 PGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAK 298
Query: 84 GEAGPAGPTGPAG 96
GE G GP G G
Sbjct: 299 GEPGTRGPPGLIG 311
Score = 63.9 bits (154), Expect = 1e-10
Identities = 48/127 (37%), Positives = 56/127 (44%), Gaps = 17/127 (13%)
Query: 15 GSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDG--------RDGRDGAPGAPGEKG 66
G P +K S PG PG G PG G +G PG DG G G GA GE G
Sbjct: 243 GLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPG 302
Query: 67 EGGRPGLPGPRGD-----PGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRV--PP-- 117
G PGL GP G PGP+G+ GPAG G G+ P ++ + PP
Sbjct: 303 TRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGL 362
Query: 118 PSDAPLP 124
P A LP
Sbjct: 363 PGSAGLP 369
Score = 61.6 bits (148), Expect = 6e-10
Identities = 53/144 (36%), Positives = 59/144 (40%), Gaps = 25/144 (17%)
Query: 3 PLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGT--PGHHGSQGLPGRDG--RDGRDGA 58
PLL + L G G P + P PG PG PG PG HG G G G R G+ G
Sbjct: 69 PLLPMDLKG-EPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGP 127
Query: 59 PGAPGEKGEGGRPGL---------------PGPRGDPGPRGEAGPAGPTGPAGECSVPPR 103
PG PG+ G G+PGL PGP G PGP G P P G VP
Sbjct: 128 PGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKP----GAQGVPGP 183
Query: 104 SAFSAKRSESRVP-PPSDAPLPFD 126
F + P PP D L D
Sbjct: 184 PGFQGEPGPQGEPGPPGDRGLKGD 207
Score = 55.1 bits (131), Expect = 6e-08
Identities = 30/72 (41%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEK---GEGGRPGLPGPRGDPGPRGE 85
PG G G G G G+ G G G G PG PGE+ G G PG GP+G+PG G
Sbjct: 375 PGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGR 434
Query: 86 AGPAGPTGPAGE 97
G G G G+
Sbjct: 435 PGGPGVAGALGQ 446
Score = 28.9 bits (63), Expect = 4.2
Identities = 16/45 (35%), Positives = 20/45 (44%)
Query: 57 GAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVP 101
G G P +G+G +P P +GE GP G GP G P
Sbjct: 50 GPVGPPFREGKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPP 94
>gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 136 bits (343), Expect = 1e-32
Identities = 90/249 (36%), Positives = 124/249 (49%), Gaps = 33/249 (13%)
Query: 11 GLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGR 70
G+ S P+ IP G PGLPG PG G G+ G G G PG PG G G+
Sbjct: 501 GIGGPSGPIGPPGIPGP-KGEPGLPGPPGFPGI----GKPGVAGLHGPPGKPGALGPQGQ 555
Query: 71 PGLPGPRGDPGPRGEAGPAGPTGPA----------GECSVPPRSAFSAKRSESRVP---- 116
PGLPGP G PGP G PT P G V P A+ AK+ ++ P
Sbjct: 556 PGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPPHAYGAKKGKNGGPAYEM 615
Query: 117 -----------PPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASLQ 165
PP AP+ F+++L N + +Y+ TG FTC+VPGVYYFA H ++
Sbjct: 616 PAFTAELTAPFPPVGAPVKFNKLLYNGRQNYNPQTGIFTCEVPGVYYFAYHVHCKGGNVW 675
Query: 166 FDLVKNGESIA-SFFQFFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIKTD 224
L KN E + ++ ++ G+ A SG A++ L P D+V++Q+ G+YA
Sbjct: 676 VALFKNNEPVMYTYDEYKKGFLDQA--SGSAVLLLRPGDRVFLQMPSEQAAGLYAGQYVH 733
Query: 225 STFSGFLVY 233
S+FSG+L+Y
Sbjct: 734 SSFSGYLLY 742
Score = 74.7 bits (182), Expect = 7e-14
Identities = 45/105 (42%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
Query: 30 GHPGLPGTPGHHGSQGLPGR---DGRDGRDGAPGAPGEKGEGGRPGLPGPRGD------P 80
G PG PG G G G+PG G G GAPG G GE G PG+PGP G P
Sbjct: 351 GKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFP 410
Query: 81 GPRGEAGPAGPTGPAGECSVPPRSAFSAKRS-ESRVPPPSDAPLP 124
GP+GE G GP GP G P F K V PP LP
Sbjct: 411 GPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLP 455
Score = 72.0 bits (175), Expect = 4e-13
Identities = 45/110 (40%), Positives = 52/110 (47%), Gaps = 16/110 (14%)
Query: 30 GHPGLPGTPGHHGSQGLPG-----------RDGRDGRDGAPGAPGEKGEGGRPGLPGPRG 78
G PG PG PG G G+PG + G+DG G PG PG KGE G PGLPGP G
Sbjct: 287 GKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPG 346
Query: 79 DPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVP----PPSDAPLP 124
PG G+ G GP G G VP ++ P PP + LP
Sbjct: 347 LPG-IGKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLP 395
Score = 70.9 bits (172), Expect = 1e-12
Identities = 38/79 (48%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGG------RPGLPGPRGDPGP 82
PG PG+PG G G+ G PG G G G G PG KGE G +PG G G PG
Sbjct: 392 PGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGM 451
Query: 83 RGEAGPAGPTGPAGECSVP 101
RG GP GP G AG+ VP
Sbjct: 452 RGLPGPIGPKGEAGQKGVP 470
Score = 70.5 bits (171), Expect = 1e-12
Identities = 41/110 (37%), Positives = 47/110 (42%), Gaps = 14/110 (12%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGR--------------PGLP 74
PG PG+PG PG G G G G+ G G G PG +G G PG P
Sbjct: 160 PGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQP 219
Query: 75 GPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAPLP 124
GP+GD GP+G GP G GP G+ A K PP LP
Sbjct: 220 GPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVGLP 269
Score = 69.3 bits (168), Expect = 3e-12
Identities = 42/106 (39%), Positives = 52/106 (49%), Gaps = 7/106 (6%)
Query: 15 GSPPLDDNKIPSLC--PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPG 72
G P L + IP + PG G PG G G G+PG+ G G GA G G+KGE G G
Sbjct: 133 GPPGLPGHGIPGIKGKPGPQGYPGV-GKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMG 191
Query: 73 LPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPP 118
+PGP+G PGP G G P GP +P + R +P P
Sbjct: 192 IPGPQGPPGPHGLPGIGKPGGP----GLPGQPGPKGDRGPKGLPGP 233
Score = 68.2 bits (165), Expect = 6e-12
Identities = 39/100 (39%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 29 PGHPGLPGTPGHHGSQGLPG------RDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGP 82
PG PG G G G +GLPG G+ G G PG PG G G PG+PG +G GP
Sbjct: 437 PGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGP 496
Query: 83 RGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAP 122
G G GP+GP G +P + E +P P P
Sbjct: 497 PGIPGIGGPSGPIGPPGIP------GPKGEPGLPGPPGFP 530
Score = 65.9 bits (159), Expect = 3e-11
Identities = 43/103 (41%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 10 LGLAAGSPPLDDNKIPSLC-PGHPGLPGTPG---HHGSQGLPGRDGRDGRDG-----APG 60
+G+ P + +P + PG PGLPG PG G +GLPG G G G PG
Sbjct: 190 MGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPG 249
Query: 61 APGEKGEGGRPGLPGPRGDP--GPRGEAGPAGPTGPAGECSVP 101
APG KG G G PGP G P G G G GP GP G+ P
Sbjct: 250 APGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAP 292
Score = 65.1 bits (157), Expect = 5e-11
Identities = 33/70 (47%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGA--PGAPGEKGEGGRPGLPGPRGDPGPRGEA 86
PG PGLPG HG G+ G+ G G G PG PG G+ G G+PG +G+ G +GE
Sbjct: 132 PGPPGLPG----HGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGEIGQKGEI 187
Query: 87 GPAGPTGPAG 96
GP G GP G
Sbjct: 188 GPMGIPGPQG 197
Score = 62.0 bits (149), Expect = 5e-10
Identities = 38/97 (39%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGR---PGLPGPRGDPGPRGE 85
PG G PG G G G G G G G PG G KGE G+ PGLPG G GP+GE
Sbjct: 425 PGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGE 484
Query: 86 AGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAP 122
G G G G +P S +P P P
Sbjct: 485 PGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEP 521
Score = 46.6 bits (109), Expect = 2e-05
Identities = 29/74 (39%), Positives = 32/74 (43%), Gaps = 16/74 (21%)
Query: 39 GHHGSQGLPGRDGRDGRDGAP--GAPGEKGE--------------GGRPGLPGPRGDPGP 82
G G +G PG G G G P G PG KG+ G PG PG G PG
Sbjct: 118 GEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGA 177
Query: 83 RGEAGPAGPTGPAG 96
+GE G G GP G
Sbjct: 178 KGEIGQKGEIGPMG 191
Score = 36.2 bits (82), Expect = 0.027
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 52 RDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTG 93
R G++ P E G GPRG+PGPRG GP G G
Sbjct: 98 RMGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGPPGLPG 139
Score = 36.2 bits (82), Expect = 0.027
Identities = 14/20 (70%), Positives = 15/20 (75%)
Query: 77 RGDPGPRGEAGPAGPTGPAG 96
RG+ GPRGE GP GP GP G
Sbjct: 117 RGEQGPRGEPGPRGPPGPPG 136
Score = 33.9 bits (76), Expect = 0.13
Identities = 18/37 (48%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Query: 65 KGEGGRPGLPGPRGDPGP-----RGEAGPAGPTGPAG 96
+GE G G PGPRG PGP G G G GP G
Sbjct: 117 RGEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQG 153
>gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 136 bits (343), Expect = 1e-32
Identities = 90/249 (36%), Positives = 124/249 (49%), Gaps = 33/249 (13%)
Query: 11 GLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGR 70
G+ S P+ IP G PGLPG PG G G+ G G G PG PG G G+
Sbjct: 501 GIGGPSGPIGPPGIPGP-KGEPGLPGPPGFPGI----GKPGVAGLHGPPGKPGALGPQGQ 555
Query: 71 PGLPGPRGDPGPRGEAGPAGPTGPA----------GECSVPPRSAFSAKRSESRVP---- 116
PGLPGP G PGP G PT P G V P A+ AK+ ++ P
Sbjct: 556 PGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPPHAYGAKKGKNGGPAYEM 615
Query: 117 -----------PPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASLQ 165
PP AP+ F+++L N + +Y+ TG FTC+VPGVYYFA H ++
Sbjct: 616 PAFTAELTAPFPPVGAPVKFNKLLYNGRQNYNPQTGIFTCEVPGVYYFAYHVHCKGGNVW 675
Query: 166 FDLVKNGESIA-SFFQFFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIKTD 224
L KN E + ++ ++ G+ A SG A++ L P D+V++Q+ G+YA
Sbjct: 676 VALFKNNEPVMYTYDEYKKGFLDQA--SGSAVLLLRPGDRVFLQMPSEQAAGLYAGQYVH 733
Query: 225 STFSGFLVY 233
S+FSG+L+Y
Sbjct: 734 SSFSGYLLY 742
Score = 74.7 bits (182), Expect = 7e-14
Identities = 45/105 (42%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
Query: 30 GHPGLPGTPGHHGSQGLPGR---DGRDGRDGAPGAPGEKGEGGRPGLPGPRGD------P 80
G PG PG G G G+PG G G GAPG G GE G PG+PGP G P
Sbjct: 351 GKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFP 410
Query: 81 GPRGEAGPAGPTGPAGECSVPPRSAFSAKRS-ESRVPPPSDAPLP 124
GP+GE G GP GP G P F K V PP LP
Sbjct: 411 GPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLP 455
Score = 72.0 bits (175), Expect = 4e-13
Identities = 45/110 (40%), Positives = 52/110 (47%), Gaps = 16/110 (14%)
Query: 30 GHPGLPGTPGHHGSQGLPG-----------RDGRDGRDGAPGAPGEKGEGGRPGLPGPRG 78
G PG PG PG G G+PG + G+DG G PG PG KGE G PGLPGP G
Sbjct: 287 GKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPG 346
Query: 79 DPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVP----PPSDAPLP 124
PG G+ G GP G G VP ++ P PP + LP
Sbjct: 347 LPG-IGKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLP 395
Score = 70.9 bits (172), Expect = 1e-12
Identities = 38/79 (48%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGG------RPGLPGPRGDPGP 82
PG PG+PG G G+ G PG G G G G PG KGE G +PG G G PG
Sbjct: 392 PGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGM 451
Query: 83 RGEAGPAGPTGPAGECSVP 101
RG GP GP G AG+ VP
Sbjct: 452 RGLPGPIGPKGEAGQKGVP 470
Score = 70.5 bits (171), Expect = 1e-12
Identities = 41/110 (37%), Positives = 47/110 (42%), Gaps = 14/110 (12%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGR--------------PGLP 74
PG PG+PG PG G G G G+ G G G PG +G G PG P
Sbjct: 160 PGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQP 219
Query: 75 GPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAPLP 124
GP+GD GP+G GP G GP G+ A K PP LP
Sbjct: 220 GPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVGLP 269
Score = 69.3 bits (168), Expect = 3e-12
Identities = 42/106 (39%), Positives = 52/106 (49%), Gaps = 7/106 (6%)
Query: 15 GSPPLDDNKIPSLC--PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPG 72
G P L + IP + PG G PG G G G+PG+ G G GA G G+KGE G G
Sbjct: 133 GPPGLPGHGIPGIKGKPGPQGYPGV-GKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMG 191
Query: 73 LPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPP 118
+PGP+G PGP G G P GP +P + R +P P
Sbjct: 192 IPGPQGPPGPHGLPGIGKPGGP----GLPGQPGPKGDRGPKGLPGP 233
Score = 68.2 bits (165), Expect = 6e-12
Identities = 39/100 (39%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 29 PGHPGLPGTPGHHGSQGLPG------RDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGP 82
PG PG G G G +GLPG G+ G G PG PG G G PG+PG +G GP
Sbjct: 437 PGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGP 496
Query: 83 RGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAP 122
G G GP+GP G +P + E +P P P
Sbjct: 497 PGIPGIGGPSGPIGPPGIP------GPKGEPGLPGPPGFP 530
Score = 65.9 bits (159), Expect = 3e-11
Identities = 43/103 (41%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 10 LGLAAGSPPLDDNKIPSLC-PGHPGLPGTPG---HHGSQGLPGRDGRDGRDG-----APG 60
+G+ P + +P + PG PGLPG PG G +GLPG G G G PG
Sbjct: 190 MGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPG 249
Query: 61 APGEKGEGGRPGLPGPRGDP--GPRGEAGPAGPTGPAGECSVP 101
APG KG G G PGP G P G G G GP GP G+ P
Sbjct: 250 APGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAP 292
Score = 65.1 bits (157), Expect = 5e-11
Identities = 33/70 (47%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGA--PGAPGEKGEGGRPGLPGPRGDPGPRGEA 86
PG PGLPG HG G+ G+ G G G PG PG G+ G G+PG +G+ G +GE
Sbjct: 132 PGPPGLPG----HGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGEIGQKGEI 187
Query: 87 GPAGPTGPAG 96
GP G GP G
Sbjct: 188 GPMGIPGPQG 197
Score = 62.0 bits (149), Expect = 5e-10
Identities = 38/97 (39%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGR---PGLPGPRGDPGPRGE 85
PG G PG G G G G G G G PG G KGE G+ PGLPG G GP+GE
Sbjct: 425 PGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGE 484
Query: 86 AGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAP 122
G G G G +P S +P P P
Sbjct: 485 PGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEP 521
Score = 46.6 bits (109), Expect = 2e-05
Identities = 29/74 (39%), Positives = 32/74 (43%), Gaps = 16/74 (21%)
Query: 39 GHHGSQGLPGRDGRDGRDGAP--GAPGEKGE--------------GGRPGLPGPRGDPGP 82
G G +G PG G G G P G PG KG+ G PG PG G PG
Sbjct: 118 GEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGA 177
Query: 83 RGEAGPAGPTGPAG 96
+GE G G GP G
Sbjct: 178 KGEIGQKGEIGPMG 191
Score = 36.2 bits (82), Expect = 0.027
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 52 RDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTG 93
R G++ P E G GPRG+PGPRG GP G G
Sbjct: 98 RMGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGPPGLPG 139
Score = 36.2 bits (82), Expect = 0.027
Identities = 14/20 (70%), Positives = 15/20 (75%)
Query: 77 RGDPGPRGEAGPAGPTGPAG 96
RG+ GPRGE GP GP GP G
Sbjct: 117 RGEQGPRGEPGPRGPPGPPG 136
Score = 33.9 bits (76), Expect = 0.13
Identities = 18/37 (48%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Query: 65 KGEGGRPGLPGPRGDPGP-----RGEAGPAGPTGPAG 96
+GE G G PGPRG PGP G G G GP G
Sbjct: 117 RGEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQG 153
>gi|7705753 complement component 1, q subcomponent, A chain
precursor [Homo sapiens]
Length = 245
Score = 113 bits (282), Expect = 2e-25
Identities = 85/243 (34%), Positives = 110/243 (45%), Gaps = 16/243 (6%)
Query: 2 RPLLVLLLLGLAAGSPPLDD-------NKIPSLCPGHPGLPGTPGHHGSQGLPG-RDGRD 53
R LVL +L ++ S +D K + PG G PG G G G PG R G
Sbjct: 5 RGWLVLCVLAISLASMVTEDLCRAPDGKKGEAGRPGRRGRPGLKGEQGEPGAPGIRTGIQ 64
Query: 54 GRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSES 113
G G G PG G G+ G PGP G G RG G G G G PR AFSA R
Sbjct: 65 GLKGDQGEPGPSGNPGKVGYPGPSGPLGARGIPGIKGTKGSPGNIKDQPRPAFSAIR--- 121
Query: 114 RVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHA-TVYRASLQFDLVKNG 172
R PP + FD V+ N++ Y +G+F C VPG YYF + + L G
Sbjct: 122 RNPPMGGNVVIFDTVITNQEEPYQNHSGRFVCTVPGYYYFTFQVLSQWEICLSIVSSSRG 181
Query: 173 ESIASFFQFFGGWPKP--ASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIKTDSTFSGF 230
+ + F K +SGG +++L+ DQVWV+ IY + DS FSGF
Sbjct: 182 Q-VRRSLGFCDTTNKGLFQVVSGGMVLQLQQGDQVWVEKDPKKG-HIYQGSEADSVFSGF 239
Query: 231 LVY 233
L++
Sbjct: 240 LIF 242
>gi|56606142 complement component 1, q subcomponent-like 4 [Homo
sapiens]
Length = 238
Score = 113 bits (282), Expect = 2e-25
Identities = 79/212 (37%), Positives = 105/212 (49%), Gaps = 18/212 (8%)
Query: 29 PGHPGLPGT--PGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEA 86
PG G P + P G++G GR G+ G G PG PG +G G PG PGP G PGP
Sbjct: 40 PGPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPGP---- 95
Query: 87 GPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQ 146
GP G A PR AF A R P L FD V+ N Y+A +GKFTC
Sbjct: 96 ---GPGGVAPAAGYVPRIAFYA---GLRRPHEGYEVLRFDDVVTNVGNAYEAASGKFTCP 149
Query: 147 VPGVYYFAVHATVY---RASLQFDLVKNGESIASFFQFFGGWPKPASLSGGAMVRLEPED 203
+PGVY+FA H + S+ DL+KNG+ AS + S ++ L+ D
Sbjct: 150 MPGVYFFAYHVLMRGGDGTSMWADLMKNGQVRASAIAQDADQNYDYA-SNSVILHLDVGD 208
Query: 204 QVWVQVGVGDYIGIYASIKTDSTFSGFLVYSD 235
+V++++ G G + STFSGF++Y D
Sbjct: 209 EVFIKLDGGKVHG--GNTNKYSTFSGFIIYPD 238
>gi|58801559 complement component 1, q subcomponent-like 3 [Homo
sapiens]
Length = 255
Score = 112 bits (280), Expect = 3e-25
Identities = 76/215 (35%), Positives = 104/215 (48%), Gaps = 17/215 (7%)
Query: 24 IPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPR 83
+P+ G G G PG G +G P G G G G PGEKGE GR GLPGP G PG
Sbjct: 55 LPTFIQGPKGEAGRPGKAGPRGPP---GEPGPPGPMGPPGEKGEPGRQGLPGPPGAPG-- 109
Query: 84 GEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKF 143
AG A +VP + ++ + + L FD V+ N HYD TGKF
Sbjct: 110 --LNAAGAISAATYSTVPKIAFYAGLKRQHE----GYEVLKFDDVVTNLGNHYDPTTGKF 163
Query: 144 TCQVPGVYYFAVHATVY---RASLQFDLVKNGESIASFFQFFGGWPKPASLSGGAMVRLE 200
TC +PG+Y+F H + S+ DL KN + AS + S ++ LE
Sbjct: 164 TCSIPGIYFFTYHVLMRGGDGTSMWADLCKNNQVRASAIAQDADQNYDYA-SNSVVLHLE 222
Query: 201 PEDQVWVQVGVGDYIGIYASIKTDSTFSGFLVYSD 235
P D+V++++ G G + STFSGF++Y+D
Sbjct: 223 PGDEVYIKLDGGKAHG--GNNNKYSTFSGFIIYAD 255
>gi|154937344 complement component 1, q subcomponent-like 2 [Homo
sapiens]
Length = 287
Score = 108 bits (270), Expect = 4e-24
Identities = 82/229 (35%), Positives = 105/229 (45%), Gaps = 18/229 (7%)
Query: 19 LDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRG 78
L N P G G PG PG G +G PG G G G PGEKG+ GRPGLPG +
Sbjct: 65 LSANPPPPFIQGPKGDPGRPGKPGPRGPPGEPGPPG---PRGPPGEKGDSGRPGLPGLQL 121
Query: 79 DPGPRGEAG-PAGPTGPAGECSVPPRSAFSAKRSESRV--------PPPSDAPLPFDRVL 129
G G G G G+ SA SA S ++ P L FD V+
Sbjct: 122 TAGTASGVGVVGGGAGVGGDSEGEVTSALSATFSGPKIAFYVGLKSPHEGYEVLKFDDVV 181
Query: 130 VNEQGHYDAVTGKFTCQVPGVYYFAVHATVY---RASLQFDLVKNGESIASFFQFFGGWP 186
N HYD TGKF+CQV G+Y+F H + S+ DL KNG+ AS
Sbjct: 182 TNLGNHYDPTTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQN 241
Query: 187 KPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIKTDSTFSGFLVYSD 235
+ S ++ L+ D+V+V++ G G + STFSGFL+Y D
Sbjct: 242 YDYA-SNSVVLHLDSGDEVYVKLDGGKAHG--GNNNKYSTFSGFLLYPD 287
>gi|5729785 complement component 1, q subcomponent-like 1 [Homo
sapiens]
Length = 258
Score = 105 bits (263), Expect = 3e-23
Identities = 75/199 (37%), Positives = 98/199 (49%), Gaps = 12/199 (6%)
Query: 42 GSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRG--EAGPAGPTGPAGECS 99
G QG PGR G+ G G PG PG G G PG G G PGP G AG +G A +
Sbjct: 67 GPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSGAISTATYTT 126
Query: 100 VPPRSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATV 159
V PR AF A P L FD V+ N +YDA +GKFTC +PG Y+F H +
Sbjct: 127 V-PRVAFYAGLKN---PHEGYEVLKFDDVVTNLGNNYDAASGKFTCNIPGTYFFTYHVLM 182
Query: 160 Y---RASLQFDLVKNGESIASFFQFFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIG 216
S+ DL KNG+ AS + S ++ L+ D+V++++ G G
Sbjct: 183 RGGDGTSMWADLCKNGQVRASAIAQDADQNYDYA-SNSVILHLDAGDEVFIKLDGGKAHG 241
Query: 217 IYASIKTDSTFSGFLVYSD 235
+ STFSGF++YSD
Sbjct: 242 --GNSNKYSTFSGFIIYSD 258
>gi|13569919 C1q and tumor necrosis factor related protein 3 isoform
a [Homo sapiens]
Length = 246
Score = 100 bits (248), Expect = 1e-21
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 14/204 (6%)
Query: 33 GLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPT 92
G G PG G G+PG G +G +GA G G KGE G +GD GPRGE G GP
Sbjct: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGE------KGDKGDLGPRGERGQHGPK 104
Query: 93 GPAGECSVPPRSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYY 152
G G +PP + S + ++ + F V N +D +TG+F V GVY+
Sbjct: 105 GEKGYPGIPPELQIAFMASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYF 164
Query: 153 FAVHATVYR--ASLQFDLVKNGESIASFFQF-FGGWPKPASLSGGAMVRLEPEDQVWVQV 209
F + + L+ NG ++ S + + G K + S A+++L D+VW+++
Sbjct: 165 FTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKG--KSDTSSNHAVLKLAKGDEVWLRM 222
Query: 210 GVGDYIGIYASIKTDSTFSGFLVY 233
G G ++ + STF+GFL++
Sbjct: 223 GNG---ALHGDHQRFSTFAGFLLF 243
>gi|62739183 C1q and tumor necrosis factor related protein 3 isoform
b [Homo sapiens]
Length = 319
Score = 100 bits (248), Expect = 1e-21
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 14/204 (6%)
Query: 33 GLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPT 92
G G PG G G+PG G +G +GA G G KGE G +GD GPRGE G GP
Sbjct: 124 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGE------KGDKGDLGPRGERGQHGPK 177
Query: 93 GPAGECSVPPRSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYY 152
G G +PP + S + ++ + F V N +D +TG+F V GVY+
Sbjct: 178 GEKGYPGIPPELQIAFMASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYF 237
Query: 153 FAVHATVYR--ASLQFDLVKNGESIASFFQF-FGGWPKPASLSGGAMVRLEPEDQVWVQV 209
F + + L+ NG ++ S + + G K + S A+++L D+VW+++
Sbjct: 238 FTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKG--KSDTSSNHAVLKLAKGDEVWLRM 295
Query: 210 GVGDYIGIYASIKTDSTFSGFLVY 233
G G ++ + STF+GFL++
Sbjct: 296 GNG---ALHGDHQRFSTFAGFLLF 316
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 88.6 bits (218), Expect = 5e-18
Identities = 49/108 (45%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 15 GSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLP 74
G+ L + P G PGL GT G G G PG DG GRDG+PG G++GE G PG P
Sbjct: 984 GANGLSGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAP 1043
Query: 75 GPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAP 122
G G PGP G GPAG +G GE S P A + + SR P P
Sbjct: 1044 GAPGHPGPPGPVGPAGKSGDRGE-SGPAGPAGAPGPAGSRGAPGPQGP 1090
Score = 82.8 bits (203), Expect = 2e-16
Identities = 41/82 (50%), Positives = 44/82 (53%)
Query: 15 GSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLP 74
G P D P G G PG PG G +G PG G G G GAPG+ GE G PG P
Sbjct: 543 GGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGP 602
Query: 75 GPRGDPGPRGEAGPAGPTGPAG 96
GP+G PG GE GP GP GP G
Sbjct: 603 GPQGPPGKNGETGPQGPPGPTG 624
Score = 82.8 bits (203), Expect = 2e-16
Identities = 46/110 (41%), Positives = 52/110 (47%)
Query: 15 GSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLP 74
G+P L P PG G G PG G G PG++G G G GAPGEKGEGG PG+
Sbjct: 783 GAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVA 842
Query: 75 GPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAPLP 124
GP G GP G GP G G G P + F R P + P P
Sbjct: 843 GPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGP 892
Score = 79.0 bits (193), Expect = 4e-15
Identities = 41/77 (53%), Positives = 45/77 (58%), Gaps = 9/77 (11%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGA------PGAPGEKGEGGRPGLP---GPRGD 79
PG G G PG G+ G+PG+DG G G G PG+KGEGG PGLP GPRG
Sbjct: 737 PGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGS 796
Query: 80 PGPRGEAGPAGPTGPAG 96
PG RGE GP GP G G
Sbjct: 797 PGERGETGPPGPAGFPG 813
Score = 78.6 bits (192), Expect = 5e-15
Identities = 42/98 (42%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 25 PSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRG 84
P G PG G PG G +G+PG G G DG PG PG +GE GRPG PGP GPRG
Sbjct: 517 PRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPGP---SGPRG 573
Query: 85 EAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAP 122
+ G G GP G P + + +R P P P
Sbjct: 574 QPGVMGFPGPKGNDGAPGK---NGERGGPGGPGPQGPP 608
Score = 78.2 bits (191), Expect = 6e-15
Identities = 40/90 (44%), Positives = 41/90 (45%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGP 88
PG G PG PG G G PG G G GAPG G G G PGL G G PGP G G
Sbjct: 650 PGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGA 709
Query: 89 AGPTGPAGECSVPPRSAFSAKRSESRVPPP 118
AGP GP G P +R P P
Sbjct: 710 AGPPGPPGAAGTPGLQGMPGERGGLGSPGP 739
Score = 77.8 bits (190), Expect = 8e-15
Identities = 39/99 (39%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGD---PGPRGE 85
PG GLPG PG +G+ G PG G G+DG PG G G G PG+ GP+GD PG +G
Sbjct: 875 PGARGLPGPPGSNGNPGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGS 934
Query: 86 AGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAPLP 124
G GP G G + + +P P +P P
Sbjct: 935 PGAQGPPGAPGPLGIAGITGARGLAGPPGMPGPRGSPGP 973
Score = 77.0 bits (188), Expect = 1e-14
Identities = 39/73 (53%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGA------PGEKGEGGRPGLPGPRGDPGPR 83
GHPG PG+PG+ G G PG+ G G G PGA G+ GE GRPG PG RG PGP
Sbjct: 189 GHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPP 248
Query: 84 GEAGPAGPTGPAG 96
G GPAG G G
Sbjct: 249 GIKGPAGIPGFPG 261
Score = 77.0 bits (188), Expect = 1e-14
Identities = 43/97 (44%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGP 88
PG GLPG PG G G+PG G G G G GEKGE G PGL G G PG G GP
Sbjct: 239 PGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGP 298
Query: 89 AGPTGPAGECSVP-------PRSAFSAKRSESRVPPP 118
GP G GE P R A+ S+ + PP
Sbjct: 299 MGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPP 335
Score = 76.6 bits (187), Expect = 2e-14
Identities = 36/71 (50%), Positives = 40/71 (56%)
Query: 33 GLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPT 92
GL G PG G G PG G G G+PG+PG +G G PG GP G PGP G GP+GP
Sbjct: 168 GLAGYPGPAGPPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPA 227
Query: 93 GPAGECSVPPR 103
G GE P R
Sbjct: 228 GKDGESGRPGR 238
Score = 76.6 bits (187), Expect = 2e-14
Identities = 41/87 (47%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 14 AGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGL 73
AG+P L P G G G PG G+ G PG G G G G+PG KG+ G PG
Sbjct: 689 AGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGG 748
Query: 74 PGPRGDP---GPRGEAGPAGPTGPAGE 97
PG G P GPRG GP GP GPAG+
Sbjct: 749 PGADGVPGKDGPRGPTGPIGPPGPAGQ 775
Score = 76.6 bits (187), Expect = 2e-14
Identities = 43/100 (43%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 14 AGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAP---------GE 64
+GSP D P+ G PG PG G G G PG G G G PGAP G
Sbjct: 896 SGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGA 955
Query: 65 KGEGGRPGLPGPRGDPGP---RGEAGPAGPTGPAGECSVP 101
+G G PG+PGPRG PGP +GE+G G G +GE P
Sbjct: 956 RGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGPP 995
Score = 76.3 bits (186), Expect = 2e-14
Identities = 43/106 (40%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPA 89
G G G PG G QGLPG G G +G PG PG KG+ G PG PG +GD G GE GP
Sbjct: 627 GDKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPP 686
Query: 90 GPTGPAG-ECSVPPRSAFSAKRSESRVPPPSDAPLPFDRVLVNEQG 134
G G G P K + PP A P + + E+G
Sbjct: 687 GLAGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERG 732
Score = 76.3 bits (186), Expect = 2e-14
Identities = 40/99 (40%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGD------PGPR 83
G PG+ G PG G G PG G G G+PG PG G G GLPGP G PGP
Sbjct: 837 GPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPS 896
Query: 84 GEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAP 122
G G GP GPAG P S + ++ P +P
Sbjct: 897 GSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSP 935
Score = 75.5 bits (184), Expect = 4e-14
Identities = 44/109 (40%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPA 89
G G G PG G GLPG +G G G GAPGE+G G PG G RG+ G RG G
Sbjct: 273 GEKGETGAPGLKGENGLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQP 332
Query: 90 GPTGPAGECSVPPRSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDA 138
GP GP G P + AK P P R QGH A
Sbjct: 333 GPPGPPGTAGFP--GSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGA 379
Score = 74.7 bits (182), Expect = 7e-14
Identities = 39/85 (45%), Positives = 45/85 (52%)
Query: 13 AAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPG 72
A G P + + PG PG G G GS G PG +G G G GAPG +G G G
Sbjct: 439 AKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNG 498
Query: 73 LPGPRGDPGPRGEAGPAGPTGPAGE 97
+PG +G G RG GPAGP G AGE
Sbjct: 499 IPGEKGPAGERGAPGPAGPRGAAGE 523
Score = 73.9 bits (180), Expect = 1e-13
Identities = 41/83 (49%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGP- 88
G G PG G G G+PG G G DG G+PGE G G PG G RG PG RG AGP
Sbjct: 438 GAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPN 497
Query: 89 --AGPTGPAGECSVP----PRSA 105
G GPAGE P PR A
Sbjct: 498 GIPGEKGPAGERGAPGPAGPRGA 520
Score = 73.9 bits (180), Expect = 1e-13
Identities = 50/119 (42%), Positives = 53/119 (44%), Gaps = 18/119 (15%)
Query: 15 GSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLP 74
GSP K S PG GL G G G QGLPG G G G G PG G GR G P
Sbjct: 969 GSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGSP 1028
Query: 75 GPRGD---------PGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAPLP 124
G +GD PG G GP GP GPAG+ S R ES P+ AP P
Sbjct: 1029 GGKGDRGENGSPGAPGAPGHPGPPGPVGPAGK---------SGDRGESGPAGPAGAPGP 1078
Score = 73.2 bits (178), Expect = 2e-13
Identities = 38/87 (43%), Positives = 43/87 (49%), Gaps = 15/87 (17%)
Query: 25 PSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRP------------- 71
P PG G PG PG G++G G G DG+ G PG PG G G P
Sbjct: 301 PRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPG 360
Query: 72 --GLPGPRGDPGPRGEAGPAGPTGPAG 96
G PG RG+PGP+G AG GP GP G
Sbjct: 361 SNGAPGQRGEPGPQGHAGAQGPPGPPG 387
Score = 72.8 bits (177), Expect = 3e-13
Identities = 41/105 (39%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 15 GSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLP 74
G+P P+ PG G G G G G G G GRDG PG PG +G G PG P
Sbjct: 486 GAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGP 545
Query: 75 GPRGDPGP---RGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVP 116
G G PGP +GE+G GP GP+G P F + P
Sbjct: 546 GSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAP 590
Score = 71.6 bits (174), Expect = 6e-13
Identities = 41/94 (43%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 9 LLGLA--AGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAP---GAPG 63
L GLA AG P D N PG G PG G G G PG G G G P G G
Sbjct: 1000 LPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAG 1059
Query: 64 EKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGE 97
+ G+ G G GP G PGP G G GP GP G+
Sbjct: 1060 KSGDRGESGPAGPAGAPGPAGSRGAPGPQGPRGD 1093
Score = 71.2 bits (173), Expect = 7e-13
Identities = 34/73 (46%), Positives = 38/73 (52%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGP 88
PG PG+ G+PG G G G G G GA G PG G G PGL G G+PG G G
Sbjct: 383 PGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGE 442
Query: 89 AGPTGPAGECSVP 101
GP G GE +P
Sbjct: 443 PGPRGERGEAGIP 455
Score = 71.2 bits (173), Expect = 7e-13
Identities = 36/77 (46%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPG---PRGEA 86
G G+PG PG G G G G G +G PGA GE+G G G GP G PG P GE
Sbjct: 450 GEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGER 509
Query: 87 GPAGPTGPAGECSVPPR 103
G GP GP G P R
Sbjct: 510 GAPGPAGPRGAAGEPGR 526
Score = 71.2 bits (173), Expect = 7e-13
Identities = 42/112 (37%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Query: 11 GLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGR 70
G A PP P G PGL G PG G G PG G G G PGA G G+ G
Sbjct: 706 GKGAAGPPG-----PPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGP 760
Query: 71 PGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAP 122
G GP G PGP G+ G G G G + +R E+ P P+ P
Sbjct: 761 RGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFP 812
Score = 70.9 bits (172), Expect = 1e-12
Identities = 33/67 (49%), Positives = 36/67 (53%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPA 89
G G PG PG G +G PG G G G G PG G+ G PG G RG PG +GE GP
Sbjct: 780 GEGGAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPP 839
Query: 90 GPTGPAG 96
G GP G
Sbjct: 840 GVAGPPG 846
Score = 70.5 bits (171), Expect = 1e-12
Identities = 34/73 (46%), Positives = 39/73 (53%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGP 88
PG G PG PG G+ G PG G G G PG PG+ G G PG PG G GP G+ G
Sbjct: 173 PGPAGPPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGE 232
Query: 89 AGPTGPAGECSVP 101
+G G GE +P
Sbjct: 233 SGRPGRPGERGLP 245
Score = 70.1 bits (170), Expect = 2e-12
Identities = 39/85 (45%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 15 GSPPLD-DNKIPSL--CPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRP 71
G+P L +N +P PG G G PG G GLPG G G DGA G+ G+ G G P
Sbjct: 279 GAPGLKGENGLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPP 338
Query: 72 GLPGPRGDPGPRGEAGPAGPTGPAG 96
G G G PG +GE GPAG G G
Sbjct: 339 GTAGFPGSPGAKGEVGPAGSPGSNG 363
Score = 70.1 bits (170), Expect = 2e-12
Identities = 37/84 (44%), Positives = 40/84 (47%), Gaps = 12/84 (14%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPA 89
G PG PG G G G PG +G G+ G PG G G G PG PG G PG +GE GPA
Sbjct: 342 GFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPA 401
Query: 90 ------------GPTGPAGECSVP 101
GP GPAG P
Sbjct: 402 GIPGAPGLMGARGPPGPAGANGAP 425
Score = 70.1 bits (170), Expect = 2e-12
Identities = 40/99 (40%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPA 89
G G PG G G +G PG G G GA G PG G G PG PGP G PG G GPA
Sbjct: 849 GPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPSGSPGKDGPPGPA 908
Query: 90 GPTGPAGECSVPPRSAFSAKRSE-----SRVPPPSDAPL 123
G TG G V + + E ++ PP + PL
Sbjct: 909 GNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPL 947
Score = 68.9 bits (167), Expect = 4e-12
Identities = 37/85 (43%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAP---GEKGEGGRPGLPGPRGDPGPRGE 85
PG G G PG +G++G PG G G G PG P GE G+ G PG PG G PG GE
Sbjct: 425 PGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGE 484
Query: 86 AGPAGPTGPAGECSVPPRSAFSAKR 110
G G GPAG +P + +R
Sbjct: 485 RGAPGFRGPAGPNGIPGEKGPAGER 509
Score = 68.6 bits (166), Expect = 5e-12
Identities = 39/86 (45%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 11 GLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGR 70
G G +N P PG PG PG PG G G G G G G GAPG G G
Sbjct: 1026 GSPGGKGDRGENGSPG-APGAPGHPGPPGPVGPAGKSGDRGESGPAGPAGAPGPAGSRGA 1084
Query: 71 PGLPGPRGDPGPRGEAGPAGPTGPAG 96
PG GPRGD G GE G AG G G
Sbjct: 1085 PGPQGPRGDKGETGERGAAGIKGHRG 1110
Score = 68.6 bits (166), Expect = 5e-12
Identities = 37/94 (39%), Positives = 40/94 (42%)
Query: 25 PSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRG 84
P+ PG G G PG G +G G G G G G G G G PG PGP G G G
Sbjct: 1072 PAGAPGPAGSRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIG 1131
Query: 85 EAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPP 118
GPAGP GP G P + S P P
Sbjct: 1132 SPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGP 1165
Score = 68.6 bits (166), Expect = 5e-12
Identities = 34/73 (46%), Positives = 37/73 (50%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGP 88
PG+PG PG+PG G QG G G G G G G G+ G G PGP G PGPRG G
Sbjct: 1112 PGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGE 1171
Query: 89 AGPTGPAGECSVP 101
G G G P
Sbjct: 1172 RGSEGSPGHPGQP 1184
Score = 68.2 bits (165), Expect = 6e-12
Identities = 35/69 (50%), Positives = 37/69 (53%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGP 88
PG G PG GH G+QG PG G +G G G G G G PGL G RG PGP G G
Sbjct: 365 PGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGA 424
Query: 89 AGPTGPAGE 97
G G AGE
Sbjct: 425 PGLRGGAGE 433
Score = 68.2 bits (165), Expect = 6e-12
Identities = 42/100 (42%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 13 AAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGR-- 70
AAG P P G+PG PG G G G PG G G G+PG G KG+ G+
Sbjct: 871 AAGFPGARGLPGPPGSNGNPGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPG 930
Query: 71 ----PGLPGPRGDPGPRGEAGPAGPTGPAGECSVP-PRSA 105
PG GP G PGP G AG G G AG +P PR +
Sbjct: 931 EKGSPGAQGPPGAPGPLGIAGITGARGLAGPPGMPGPRGS 970
Score = 67.8 bits (164), Expect = 8e-12
Identities = 39/102 (38%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRD---------GRDGRDGAPGAPGEKGEGGRPGLPGPR-- 77
PG+ G PG PG G G PG G+DG G PG PGE+G G PG+ GP
Sbjct: 197 PGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKGPAGI 256
Query: 78 -GDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPP 118
G PG +G G G G GE P + E+ P P
Sbjct: 257 PGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGP 298
Score = 67.8 bits (164), Expect = 8e-12
Identities = 48/125 (38%), Positives = 52/125 (41%), Gaps = 20/125 (16%)
Query: 15 GSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGR---P 71
G P + N P G PG G PG G+ G PG G G G G PGEKG G P
Sbjct: 882 GPPGSNGNPGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPP 941
Query: 72 GLPGP---------RGDPGPRGEAGPAGPTGP---AGECSVPPRSAFSAKRSESRVPPPS 119
G PGP RG GP G GP G GP GE P + S +R PP
Sbjct: 942 GAPGPLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGERG-----PPG 996
Query: 120 DAPLP 124
LP
Sbjct: 997 PQGLP 1001
Score = 67.0 bits (162), Expect = 1e-11
Identities = 37/82 (45%), Positives = 40/82 (48%)
Query: 15 GSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLP 74
GSP P+ PG G PG G G QG G G G G G+PG KGE G G+P
Sbjct: 345 GSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIP 404
Query: 75 GPRGDPGPRGEAGPAGPTGPAG 96
G G G RG GPAG G G
Sbjct: 405 GAPGLMGARGPPGPAGANGAPG 426
Score = 66.2 bits (160), Expect = 2e-11
Identities = 38/80 (47%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 25 PSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLP---GPRGDPG 81
PS PG PG G G G G GR GR G G PG PG KG G PG P G RG G
Sbjct: 211 PSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDG 270
Query: 82 PRGEAGPAGPTGPAGECSVP 101
GE G G G GE +P
Sbjct: 271 RNGEKGETGAPGLKGENGLP 290
Score = 65.9 bits (159), Expect = 3e-11
Identities = 45/125 (36%), Positives = 49/125 (39%), Gaps = 30/125 (24%)
Query: 30 GHPGLPGTPGHHGSQGLPG-----------------------------RDGRDGRDGAPG 60
G PG+PG PG GS G PG G G G PG
Sbjct: 121 GDPGIPGQPGSPGSPGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPG 180
Query: 61 APGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVP-PPS 119
PG G G PG PG G GP GE G AGP+GP G S + K ES P P
Sbjct: 181 PPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPG 240
Query: 120 DAPLP 124
+ LP
Sbjct: 241 ERGLP 245
Score = 65.5 bits (158), Expect = 4e-11
Identities = 36/76 (47%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPG---LPGPRGDPGPRGE 85
PG PG G G G++GL G G G G+PG G KGE G+PG L G RG PGP+G
Sbjct: 941 PGAPGPLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGL 1000
Query: 86 AGPAGPTGPAGECSVP 101
G AG G G P
Sbjct: 1001 PGLAGTAGEPGRDGNP 1016
Score = 65.5 bits (158), Expect = 4e-11
Identities = 36/82 (43%), Positives = 40/82 (48%), Gaps = 12/82 (14%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRP---GLPGPRGD------ 79
PG PG PG G G+ G PG G G G G PG+ G G P G PGPRG+
Sbjct: 1115 PGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGS 1174
Query: 80 ---PGPRGEAGPAGPTGPAGEC 98
PG G+ GP GP G G C
Sbjct: 1175 EGSPGHPGQPGPPGPPGAPGPC 1196
Score = 64.3 bits (155), Expect = 9e-11
Identities = 40/95 (42%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 13 AAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGE---GG 69
A G P D + P+ G PG G PG G G PG G G G+PG GE G G
Sbjct: 751 ADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAG 810
Query: 70 RPGLPGPRGDPGPRGEAGPAGPTGPAGECSV--PP 102
PG PG G+PG +GE G G G G V PP
Sbjct: 811 FPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPP 845
Score = 63.9 bits (154), Expect = 1e-10
Identities = 36/87 (41%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 13 AAGSPPLDDNKIPSLCPGHPGLPGT---PGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGG 69
A GSP + K + PG G PG PG G G+ G G G G PG PG +G G
Sbjct: 913 APGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPPGMPGPRGSPG 972
Query: 70 RPGLPGPRGDPGPRGEAGPAGPTGPAG 96
G+ G G PG G +G GP GP G
Sbjct: 973 PQGVKGESGKPGANGLSGERGPPGPQG 999
Score = 63.5 bits (153), Expect = 2e-10
Identities = 33/68 (48%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPA 89
G G+PG PG G++G PG G +G G G GE G+ G G PGPRG+ RGEAG
Sbjct: 399 GPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGE---RGEAGIP 455
Query: 90 GPTGPAGE 97
G G GE
Sbjct: 456 GVPGAKGE 463
Score = 63.5 bits (153), Expect = 2e-10
Identities = 47/133 (35%), Positives = 52/133 (39%), Gaps = 20/133 (15%)
Query: 15 GSPPLDDNKIPSLCP-GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGA------PGEKGE 67
G PP ++ K P G G PG PG G G PG G G GAPG PG +G
Sbjct: 647 GGPPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGG 706
Query: 68 GGRPGLPGPRGD---------PGPRGEAGPAGPTGPAGECSVPPRSAFSAKRS----ESR 114
G G PGP G PG RG G GP G GE P K
Sbjct: 707 KGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGP 766
Query: 115 VPPPSDAPLPFDR 127
+ PP A P D+
Sbjct: 767 IGPPGPAGQPGDK 779
Score = 62.4 bits (150), Expect = 3e-10
Identities = 37/95 (38%), Positives = 39/95 (41%), Gaps = 6/95 (6%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPA 89
GH G PG PG GS G G+ G G G G G G G PG G G PGP G GP
Sbjct: 1107 GHRGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPR 1166
Query: 90 GPTGPAGECSVPPRSAFSAKRSESRVPPPSDAPLP 124
G G G P + P P AP P
Sbjct: 1167 GNRGERGSEGSP------GHPGQPGPPGPPGAPGP 1195
Score = 60.1 bits (144), Expect = 2e-09
Identities = 39/96 (40%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPA 89
G GL G PG G +G PG G G G PGA G GE G PGP+G PG G AG
Sbjct: 954 GARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGP---PGPQGLPGLAGTAGEP 1010
Query: 90 GPTGPAGECSVPPRSAF---SAKRSESRVPPPSDAP 122
G G G +P R R E+ P AP
Sbjct: 1011 GRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAP 1046
Score = 59.7 bits (143), Expect = 2e-09
Identities = 38/86 (44%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 13 AAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPG 72
A GSP + P G PG GT GH G G PG G G G+ G+PG G+ PG
Sbjct: 1129 AIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQ---PG 1185
Query: 73 LPGPRGDPGP-RGEAGPAGPTGPAGE 97
PGP G PGP G G A G GE
Sbjct: 1186 PPGPPGAPGPCCGGVGAAAIAGIGGE 1211
Score = 47.8 bits (112), Expect = 9e-06
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 17/87 (19%)
Query: 16 SPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPG 75
+P + + ++CP P P P + G G KG+ G PG+PG
Sbjct: 76 NPEIPFGECCAVCPQPPTAPTRPPN-----------------GQGPQGPKGDPGPPGIPG 118
Query: 76 PRGDPGPRGEAGPAGPTGPAGECSVPP 102
GDPG G+ G G GP G C P
Sbjct: 119 RNGDPGIPGQPGSPGSPGPPGICESCP 145
>gi|148886696 surfactant protein A2 [Homo sapiens]
Length = 248
Score = 87.4 bits (215), Expect = 1e-17
Identities = 49/101 (48%), Positives = 57/101 (56%), Gaps = 14/101 (13%)
Query: 3 PLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAP 62
PL + L+L A+G+ ++ +C G PG+PGTPG H GLPGRDGRDG G PG P
Sbjct: 5 PLALTLILMAASGAAC----EVKDVCVGSPGIPGTPGSH---GLPGRDGRDGVKGDPGPP 57
Query: 63 GEKGEGGRP-------GLPGPRGDPGPRGEAGPAGPTGPAG 96
G G G GLPG G PG RGE G AG GP G
Sbjct: 58 GPMGPPGETPCPPGNNGLPGAPGVPGERGEKGEAGERGPPG 98
Score = 33.1 bits (74), Expect = 0.22
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 18/56 (32%)
Query: 25 PSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDP 80
P P PG G P GAPG PGE+GE G G GP G P
Sbjct: 63 PGETPCPPGNNGLP------------------GAPGVPGERGEKGEAGERGPPGLP 100
>gi|146149162 surfactant, pulmonary-associated protein A2 [Homo
sapiens]
Length = 248
Score = 87.4 bits (215), Expect = 1e-17
Identities = 49/101 (48%), Positives = 57/101 (56%), Gaps = 14/101 (13%)
Query: 3 PLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAP 62
PL + L+L A+G+ ++ +C G PG+PGTPG H GLPGRDGRDG G PG P
Sbjct: 5 PLALTLILMAASGAAC----EVKDVCVGSPGIPGTPGSH---GLPGRDGRDGVKGDPGPP 57
Query: 63 GEKGEGGRP-------GLPGPRGDPGPRGEAGPAGPTGPAG 96
G G G GLPG G PG RGE G AG GP G
Sbjct: 58 GPMGPPGETPCPPGNNGLPGAPGVPGERGEKGEAGERGPPG 98
Score = 33.1 bits (74), Expect = 0.22
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 18/56 (32%)
Query: 25 PSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDP 80
P P PG G P GAPG PGE+GE G G GP G P
Sbjct: 63 PGETPCPPGNNGLP------------------GAPGVPGERGEKGEAGERGPPGLP 100
>gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens]
Length = 1073
Score = 87.0 bits (214), Expect = 1e-17
Identities = 43/88 (48%), Positives = 52/88 (59%), Gaps = 9/88 (10%)
Query: 13 AAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPG 72
AAG P + + PG G PG G G G+PG +G++GRDG PG PGE G+ G PG
Sbjct: 658 AAGPPGIQGS------PGKEGPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGEPGKAGEPG 711
Query: 73 LPGP---RGDPGPRGEAGPAGPTGPAGE 97
LPGP RG PG +G G +G GP GE
Sbjct: 712 LPGPEGARGPPGFKGHTGDSGAPGPRGE 739
Score = 77.8 bits (190), Expect = 8e-15
Identities = 41/80 (51%), Positives = 46/80 (57%), Gaps = 9/80 (11%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAP---------GEKGEGGRPGLPGPRGDP 80
G PG PG G G QGL GR G G G PGAP G++GE G GLPG +GD
Sbjct: 259 GLPGKPGLRGEIGEQGLAGRPGEKGEAGLPGAPGFPGVRGEKGDQGEKGELGLPGLKGDR 318
Query: 81 GPRGEAGPAGPTGPAGECSV 100
G +GEAGPAGP G G S+
Sbjct: 319 GEKGEAGPAGPPGLPGTTSL 338
Score = 77.4 bits (189), Expect = 1e-14
Identities = 35/73 (47%), Positives = 42/73 (57%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGP 88
PG PGLPG PG G +G+PG+ GR+G +G G G G G PG+ GP+G G RG G
Sbjct: 566 PGPPGLPGLPGFKGDKGVPGKPGREGTEGKKGEAGPPGLPGPPGIAGPQGSQGERGADGE 625
Query: 89 AGPTGPAGECSVP 101
G G G VP
Sbjct: 626 VGQKGDQGHPGVP 638
Score = 74.7 bits (182), Expect = 7e-14
Identities = 42/99 (42%), Positives = 50/99 (50%), Gaps = 15/99 (15%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGA---------PGEKGEGGRPGLPGPRGD 79
PG+PG PG G G+ G PG G G++G PG PGE+G+ GR G PGP G+
Sbjct: 644 PGNPGPPGADGIAGAAGPPGIQGSPGKEGPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGE 703
Query: 80 PGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPP 118
PG GE G GP G G PP F +S P P
Sbjct: 704 PGKAGEPGLPGPEGARG----PP--GFKGHTGDSGAPGP 736
Score = 73.2 bits (178), Expect = 2e-13
Identities = 45/125 (36%), Positives = 55/125 (44%), Gaps = 7/125 (5%)
Query: 15 GSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLP 74
G P D + P+ G G G PG +GS G PG G G G G+ GE G G PG
Sbjct: 750 GLPGKDGDTGPTGPQGPQGPRGPPGKNGSPGSPGEPGPSGTPGQKGSKGENGSPGLPGFL 809
Query: 75 GPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVP----PPSDAPLPFDRVLV 130
GPRG PG GE G G G G+ P F +R + + PP P D +
Sbjct: 810 GPRGPPGEPGEKGVPGKEGVPGK---PGEPGFKGERGDPGIKGDKGPPGGKGQPGDPGIP 866
Query: 131 NEQGH 135
+GH
Sbjct: 867 GHKGH 871
Score = 72.8 bits (177), Expect = 3e-13
Identities = 43/105 (40%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 15 GSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAP------GAPGEKGEG 68
GSP L P PG PG G PG G G PG G G G P G PG KG+
Sbjct: 801 GSPGLPGFLGPRGPPGEPGEKGVPGKEGVPGKPGEPGFKGERGDPGIKGDKGPPGGKGQP 860
Query: 69 GRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSES 113
G PG+PG +G G G G G GP G P + F R ES
Sbjct: 861 GDPGIPGHKGHTGLMGPQGLPGENGPVGPPGPPGQPGFPGLRGES 905
Score = 72.0 bits (175), Expect = 4e-13
Identities = 41/87 (47%), Positives = 43/87 (49%), Gaps = 19/87 (21%)
Query: 29 PGHPGLPGTPGH--------HGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGL------- 73
PG PGLPG PG GS GLPG G G GAPG PG G G PG+
Sbjct: 454 PGAPGLPGPPGKGKDGEPGLRGSPGLPGPLGTKGDRGAPGIPGSPGSRGDPGIGVAGPPG 513
Query: 74 ----PGPRGDPGPRGEAGPAGPTGPAG 96
PG +G PG RG G GP GPAG
Sbjct: 514 PSGPPGDKGSPGSRGLPGFPGPQGPAG 540
Score = 70.5 bits (171), Expect = 1e-12
Identities = 37/69 (53%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGP 88
PGH G PG G GS G PG G G+DG G G GE G PG GPRGDPG G GP
Sbjct: 403 PGHVGAPGPSGPPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGDPGAPGLPGP 462
Query: 89 AGPTGPAGE 97
G G GE
Sbjct: 463 PG-KGKDGE 470
Score = 70.1 bits (170), Expect = 2e-12
Identities = 43/122 (35%), Positives = 53/122 (43%), Gaps = 27/122 (22%)
Query: 22 NKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAP------------------- 62
N P PG PGLPG G G G PGR+G +G+ G G P
Sbjct: 562 NDCPPGPPGLPGLPGFKGDKGVPGKPGREGTEGKKGEAGPPGLPGPPGIAGPQGSQGERG 621
Query: 63 -----GEKGEGGRPGLP---GPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESR 114
G+KG+ G PG+P GP G+PGP G G AG GP G P + + S
Sbjct: 622 ADGEVGQKGDQGHPGVPGFMGPPGNPGPPGADGIAGAAGPPGIQGSPGKEGPPGPQGPSG 681
Query: 115 VP 116
+P
Sbjct: 682 LP 683
Score = 69.7 bits (169), Expect = 2e-12
Identities = 41/114 (35%), Positives = 50/114 (43%), Gaps = 35/114 (30%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGA-----------------------------P 59
PG PG G PG G G PGR G+ G +G P
Sbjct: 949 PGPPGKDGLPGRAGPMGEPGRPGQGGLEGPSGPIGPKGERGAKGDPGAPGVGLRGEMGPP 1008
Query: 60 GAPGEKGE-----GGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSA 108
G PG+ GE G PG+PGP+G+ GP G G GP GP G+C P + A+ A
Sbjct: 1009 GIPGQPGEPGYAKDGLPGIPGPQGETGPAGHPGLPGPPGPPGQCD-PSQCAYFA 1061
Score = 69.3 bits (168), Expect = 3e-12
Identities = 41/110 (37%), Positives = 52/110 (47%), Gaps = 16/110 (14%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGR------DGRDGAPGAPGEKGEGGRPGLPGP-----R 77
PG G PG+ G G +G PG+DG G +G+PG G +G+ G PGLPGP
Sbjct: 409 PGPSGPPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGDPGAPGLPGPPGKGKD 468
Query: 78 GDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRV-----PPPSDAP 122
G+PG RG G GP G G+ P R + + P PS P
Sbjct: 469 GEPGLRGSPGLPGPLGTKGDRGAPGIPGSPGSRGDPGIGVAGPPGPSGPP 518
Score = 69.3 bits (168), Expect = 3e-12
Identities = 41/101 (40%), Positives = 49/101 (48%), Gaps = 15/101 (14%)
Query: 15 GSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLP--------GRDGRDGRDGAPGAP---- 62
G+P D + G G PG G G G P G+DG G G+PG P
Sbjct: 425 GTPGKDGERGEKGAAGEEGSPGPVGPRGDPGAPGLPGPPGKGKDGEPGLRGSPGLPGPLG 484
Query: 63 --GEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVP 101
G++G G PG PG RGDPG G AGP GP+GP G+ P
Sbjct: 485 TKGDRGAPGIPGSPGSRGDPG-IGVAGPPGPSGPPGDKGSP 524
Score = 68.6 bits (166), Expect = 5e-12
Identities = 39/97 (40%), Positives = 44/97 (45%), Gaps = 11/97 (11%)
Query: 14 AGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGA---------PGE 64
AG P L SL HP +PG G G +G PG G G G PG PG
Sbjct: 327 AGPPGLPGTT--SLFTPHPRMPGEQGPKGEKGDPGLPGEPGLQGRPGELGPQGPTGPPGA 384
Query: 65 KGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVP 101
KG+ G G PG G+PG G G GP+GP G P
Sbjct: 385 KGQEGAHGAPGAAGNPGAPGHVGAPGPSGPPGSVGAP 421
Score = 68.6 bits (166), Expect = 5e-12
Identities = 37/95 (38%), Positives = 43/95 (45%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPA 89
G G PG PG G QG PG G G G PGA G++G G PG G G PG G GP+
Sbjct: 353 GEKGDPGLPGEPGLQGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGHVGAPGPS 412
Query: 90 GPTGPAGECSVPPRSAFSAKRSESRVPPPSDAPLP 124
GP G G + +R E +P P
Sbjct: 413 GPPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGP 447
Score = 68.2 bits (165), Expect = 6e-12
Identities = 39/97 (40%), Positives = 43/97 (44%), Gaps = 24/97 (24%)
Query: 29 PGHPGLPGTPGHHGSQGL---PGRDGRDGRDGAPGAPGEKGEGGRPGLPGP--------- 76
PG PGL G PG G QG PG G++G GAPGA G G G G PGP
Sbjct: 361 PGEPGLQGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGHVGAPGPSGPPGSVGA 420
Query: 77 ------------RGDPGPRGEAGPAGPTGPAGECSVP 101
RG+ G GE G GP GP G+ P
Sbjct: 421 PGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGDPGAP 457
Score = 66.6 bits (161), Expect = 2e-11
Identities = 31/67 (46%), Positives = 37/67 (55%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPA 89
G G PG G G+ GLPG++G G+DG G G +G G G PG G PG GE GP+
Sbjct: 729 GDSGAPGPRGESGAMGLPGQEGLPGKDGDTGPTGPQGPQGPRGPPGKNGSPGSPGEPGPS 788
Query: 90 GPTGPAG 96
G G G
Sbjct: 789 GTPGQKG 795
Score = 66.6 bits (161), Expect = 2e-11
Identities = 36/96 (37%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAP---GEKGEGGRPGLPGPRGDPGPRGEA 86
G PGLPG G G G PG G G++G PG P G KGE G PG+ G +G PG +G+
Sbjct: 801 GSPGLPGFLGPRGPPGEPGEKGVPGKEGVPGKPGEPGFKGERGDPGIKGDKGPPGGKGQP 860
Query: 87 GPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAP 122
G G G G + + P P P
Sbjct: 861 GDPGIPGHKGHTGLMGPQGLPGENGPVGPPGPPGQP 896
Score = 64.7 bits (156), Expect = 7e-11
Identities = 34/72 (47%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 29 PGHPGLPGTPGHHGS---QGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGE 85
PG G PG PGH G+ G PG G G G PG GE+GE G G G G GPRG+
Sbjct: 394 PGAAGNPGAPGHVGAPGPSGPPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGD 453
Query: 86 AGPAGPTGPAGE 97
G G GP G+
Sbjct: 454 PGAPGLPGPPGK 465
Score = 64.7 bits (156), Expect = 7e-11
Identities = 43/110 (39%), Positives = 47/110 (42%), Gaps = 29/110 (26%)
Query: 11 GLAAGSPPLDDNKIPSLCPGHPGLPGT---PGHHGSQGLPGRDGRD-------------- 53
G+ PP PS PG G PG+ PG G QG GRDG
Sbjct: 505 GIGVAGPPG-----PSGPPGDKGSPGSRGLPGFPGPQGPAGRDGLSSLLSPGDINLLAKD 559
Query: 54 -------GRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAG 96
G G PG PG KG+ G PG PG G G +GEAGP G GP G
Sbjct: 560 VCNDCPPGPPGLPGLPGFKGDKGVPGKPGREGTEGKKGEAGPPGLPGPPG 609
Score = 64.7 bits (156), Expect = 7e-11
Identities = 40/101 (39%), Positives = 45/101 (44%), Gaps = 15/101 (14%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGD------PGPR 83
G G PG PG G G PG G DG GA G PG +G G+ G PGP+G PG
Sbjct: 630 GDQGHPGVPGFMGPPGNPGPPGADGIAGAAGPPGIQGSPGKEGPPGPQGPSGLPGIPGEE 689
Query: 84 GEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAPLP 124
G+ G G GP GE K E +P P A P
Sbjct: 690 GKEGRDGKPGPPGE---------PGKAGEPGLPGPEGARGP 721
Score = 63.9 bits (154), Expect = 1e-10
Identities = 40/94 (42%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Query: 13 AAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGA----------PGAP 62
A G P + K G GLPG G G +G G G G G PG
Sbjct: 290 APGFPGVRGEKGDQGEKGELGLPGLKGDRGEKGEAGPAGPPGLPGTTSLFTPHPRMPGEQ 349
Query: 63 GEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAG 96
G KGE G PGLPG G G GE GP GPTGP G
Sbjct: 350 GPKGEKGDPGLPGEPGLQGRPGELGPQGPTGPPG 383
Score = 63.5 bits (153), Expect = 2e-10
Identities = 40/102 (39%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Query: 29 PGHPGLPGTPGH------HGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGP 82
PG PG PG G G G PG G++G GAPGA G G G G PGP G PG
Sbjct: 358 PGLPGEPGLQGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGHVGAPGPSGPPGS 417
Query: 83 RGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAPLP 124
G G G G GE + A + S V P D P
Sbjct: 418 VGAPGLRGTPGKDGERG--EKGAAGEEGSPGPVGPRGDPGAP 457
Score = 63.5 bits (153), Expect = 2e-10
Identities = 36/83 (43%), Positives = 39/83 (46%), Gaps = 15/83 (18%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGP------------ 76
PG PG PG G GSQG G DG G+ G G PG G G PG PGP
Sbjct: 602 PGLPGPPGIAGPQGSQGERGADGEVGQKGDQGHPGVPGFMGPPGNPGPPGADGIAGAAGP 661
Query: 77 ---RGDPGPRGEAGPAGPTGPAG 96
+G PG G GP GP+G G
Sbjct: 662 PGIQGSPGKEGPPGPQGPSGLPG 684
Score = 60.8 bits (146), Expect = 1e-09
Identities = 37/94 (39%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Query: 30 GHPGLPGTPGHHGSQG-LPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGP 88
G PGLPGT +PG G G G PG PGE G GRPG GP+G GP G G
Sbjct: 328 GPPGLPGTTSLFTPHPRMPGEQGPKGEKGDPGLPGEPGLQGRPGELGPQGPTGPPGAKGQ 387
Query: 89 AGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAP 122
G G G P S P AP
Sbjct: 388 EGAHGAPGAAGNPGAPGHVGAPGPSGPPGSVGAP 421
Score = 58.2 bits (139), Expect = 7e-09
Identities = 30/57 (52%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 43 SQGLPGRDGRDGRDGAPGAPGEKGEGGRP---GLPGPRGDPGPRGEAGPAGPTGPAG 96
SQG PG G G+DG PG G GE GRP GL GP G GP+GE G G G G
Sbjct: 942 SQGRPGPPGPPGKDGLPGRAGPMGEPGRPGQGGLEGPSGPIGPKGERGAKGDPGAPG 998
Score = 57.0 bits (136), Expect = 1e-08
Identities = 46/145 (31%), Positives = 51/145 (35%), Gaps = 62/145 (42%)
Query: 15 GSPPLDDNKIPSLCPGHPGLPGTPGHHGS------QGLPGRD---GRDGRDGAPGAPGEK 65
G P + +K P G PG PG PGH G QGLPG + G G G PG PG +
Sbjct: 843 GDPGIKGDKGPPGGKGQPGDPGIPGHKGHTGLMGPQGLPGENGPVGPPGPPGQPGFPGLR 902
Query: 66 GEG--------------------------------------GRPGLPGPRGD-------- 79
GE GRPG PGP G
Sbjct: 903 GESPSMETLRRLIQEELGKQLETRLAYLLAQMPPAYMKSSQGRPGPPGPPGKDGLPGRAG 962
Query: 80 -------PGPRGEAGPAGPTGPAGE 97
PG G GP+GP GP GE
Sbjct: 963 PMGEPGRPGQGGLEGPSGPIGPKGE 987
Score = 55.1 bits (131), Expect = 6e-08
Identities = 36/113 (31%), Positives = 42/113 (37%), Gaps = 41/113 (36%)
Query: 30 GHPGLPGTPGHHGSQGL-----------PGRDGRDGRDGAPGAPGEKGEGGR-------- 70
G PG+PG+PG G G+ PG G G G PG PG +G GR
Sbjct: 490 GAPGIPGSPGSRGDPGIGVAGPPGPSGPPGDKGSPGSRGLPGFPGPQGPAGRDGLSSLLS 549
Query: 71 ----------------------PGLPGPRGDPGPRGEAGPAGPTGPAGECSVP 101
PGLPG +GD G G+ G G G GE P
Sbjct: 550 PGDINLLAKDVCNDCPPGPPGLPGLPGFKGDKGVPGKPGREGTEGKKGEAGPP 602
Score = 53.5 bits (127), Expect = 2e-07
Identities = 33/77 (42%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDG--RDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEA 86
PG PG+ G G G G+PG+ G G +DG PG PG +GE G G PG PGP G
Sbjct: 994 PGAPGV-GLRGEMGPPGIPGQPGEPGYAKDGLPGIPGPQGETGPAGHPGL---PGPPGPP 1049
Query: 87 GPAGPTGPAGECSVPPR 103
G P+ A S+ R
Sbjct: 1050 GQCDPSQCAYFASLAAR 1066
Score = 46.2 bits (108), Expect = 3e-05
Identities = 25/53 (47%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 60 GAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSE 112
G PGE+GE G PG PG RG+ GE G AG G GE +P F R E
Sbjct: 250 GEPGERGEDGLPGKPGLRGE---IGEQGLAGRPGEKGEAGLPGAPGFPGVRGE 299
>gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]
Length = 1626
Score = 87.0 bits (214), Expect = 1e-17
Identities = 43/88 (48%), Positives = 52/88 (59%), Gaps = 9/88 (10%)
Query: 13 AAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPG 72
AAG P + + PG G PG G G G+PG +G++GRDG PG PGE G+ G PG
Sbjct: 1211 AAGPPGIQGS------PGKEGPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGEPGKAGEPG 1264
Query: 73 LPGP---RGDPGPRGEAGPAGPTGPAGE 97
LPGP RG PG +G G +G GP GE
Sbjct: 1265 LPGPEGARGPPGFKGHTGDSGAPGPRGE 1292
Score = 77.8 bits (190), Expect = 8e-15
Identities = 40/91 (43%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGA---PGEKGEGGRPGLPGPRGDPGPRGE 85
PG PG+PG PG GS GLPG G G+ G PG PG+ G G PG PG +G+PG RGE
Sbjct: 716 PGPPGVPGPPGPGGSPGLPGEIGFPGKPGPPGPTGPPGKDGPNGPPGPPGTKGEPGERGE 775
Query: 86 AGPAGPTGPAGECSVPPRSAFSAKRSESRVP 116
G G G GE + ++ E+ +P
Sbjct: 776 DGLPGKPGLRGEIGEQGLAGRPGEKGEAGLP 806
Score = 77.8 bits (190), Expect = 8e-15
Identities = 41/80 (51%), Positives = 46/80 (57%), Gaps = 9/80 (11%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAP---------GEKGEGGRPGLPGPRGDP 80
G PG PG G G QGL GR G G G PGAP G++GE G GLPG +GD
Sbjct: 777 GLPGKPGLRGEIGEQGLAGRPGEKGEAGLPGAPGFPGVRGEKGDQGEKGELGLPGLKGDR 836
Query: 81 GPRGEAGPAGPTGPAGECSV 100
G +GEAGPAGP G G S+
Sbjct: 837 GEKGEAGPAGPPGLPGTTSL 856
Score = 77.4 bits (189), Expect = 1e-14
Identities = 48/109 (44%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 9 LLGLAA--GSPPLDDNKIPSLCPGHPG---LPGTPGHHGSQGLPGRDGRDGRDGAPGAPG 63
LLGL G P + P PG PG PG PG G G PG+DG +G G PG G
Sbjct: 709 LLGLQGPPGPPGVPGPPGPGGSPGLPGEIGFPGKPGPPGPTGPPGKDGPNGPPGPPGTKG 768
Query: 64 EKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSE 112
E GE G GLPG G G GE G AG G GE +P F R E
Sbjct: 769 EPGERGEDGLPGKPGLRGEIGEQGLAGRPGEKGEAGLPGAPGFPGVRGE 817
Score = 77.4 bits (189), Expect = 1e-14
Identities = 35/73 (47%), Positives = 42/73 (57%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGP 88
PG PGLPG PG G +G+PG+ GR+G +G G G G G PG+ GP+G G RG G
Sbjct: 1119 PGPPGLPGLPGFKGDKGVPGKPGREGTEGKKGEAGPPGLPGPPGIAGPQGSQGERGADGE 1178
Query: 89 AGPTGPAGECSVP 101
G G G VP
Sbjct: 1179 VGQKGDQGHPGVP 1191
Score = 74.7 bits (182), Expect = 7e-14
Identities = 36/68 (52%), Positives = 39/68 (57%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPA 89
G PG+PG G G G PG G G G+PG PGE G G+PG PGP G PG G GP
Sbjct: 702 GPPGIPGLLGLQGPPGPPGVPGPPGPGGSPGLPGEIGFPGKPGPPGPTGPPGKDGPNGPP 761
Query: 90 GPTGPAGE 97
GP G GE
Sbjct: 762 GPPGTKGE 769
Score = 74.7 bits (182), Expect = 7e-14
Identities = 42/99 (42%), Positives = 50/99 (50%), Gaps = 15/99 (15%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGA---------PGEKGEGGRPGLPGPRGD 79
PG+PG PG G G+ G PG G G++G PG PGE+G+ GR G PGP G+
Sbjct: 1197 PGNPGPPGADGIAGAAGPPGIQGSPGKEGPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGE 1256
Query: 80 PGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPP 118
PG GE G GP G G PP F +S P P
Sbjct: 1257 PGKAGEPGLPGPEGARG----PP--GFKGHTGDSGAPGP 1289
Score = 73.9 bits (180), Expect = 1e-13
Identities = 40/91 (43%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGP---RGDPGPRGE 85
PG GL G G G G+PG G G G PG PG G GG PGLPG G PGP G
Sbjct: 689 PGLQGLRGKKGDMGPPGIPGLLGLQGPPGPPGVPGPPGPGGSPGLPGEIGFPGKPGPPGP 748
Query: 86 AGPAGPTGPAGECSVPPRSAFSAKRSESRVP 116
GP G GP G P +R E +P
Sbjct: 749 TGPPGKDGPNGPPGPPGTKGEPGERGEDGLP 779
Score = 73.6 bits (179), Expect = 2e-13
Identities = 39/77 (50%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAP---------GEKGEGGRPGLPGPRGDP 80
G PGLPG G G QG PG G GR GAPG GEKGE G G PG GD
Sbjct: 557 GEPGLPGEVGMRGPQGPPGLPGPPGRVGAPGLQGERGEKGTRGEKGERGLDGFPGKPGDT 616
Query: 81 GPRGEAGPAGPTGPAGE 97
G +G GP+G GP GE
Sbjct: 617 GQQGRPGPSGVAGPQGE 633
Score = 73.2 bits (178), Expect = 2e-13
Identities = 33/68 (48%), Positives = 38/68 (55%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGP 88
PG G PG G G +G G G G DG PG PG+ G+ GRPG G G G +G+ GP
Sbjct: 580 PGRVGAPGLQGERGEKGTRGEKGERGLDGFPGKPGDTGQQGRPGPSGVAGPQGEKGDVGP 639
Query: 89 AGPTGPAG 96
AGP G G
Sbjct: 640 AGPPGVPG 647
Score = 73.2 bits (178), Expect = 2e-13
Identities = 45/125 (36%), Positives = 55/125 (44%), Gaps = 7/125 (5%)
Query: 15 GSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLP 74
G P D + P+ G G G PG +GS G PG G G G G+ GE G G PG
Sbjct: 1303 GLPGKDGDTGPTGPQGPQGPRGPPGKNGSPGSPGEPGPSGTPGQKGSKGENGSPGLPGFL 1362
Query: 75 GPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVP----PPSDAPLPFDRVLV 130
GPRG PG GE G G G G+ P F +R + + PP P D +
Sbjct: 1363 GPRGPPGEPGEKGVPGKEGVPGK---PGEPGFKGERGDPGIKGDKGPPGGKGQPGDPGIP 1419
Query: 131 NEQGH 135
+GH
Sbjct: 1420 GHKGH 1424
Score = 72.8 bits (177), Expect = 3e-13
Identities = 43/105 (40%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 15 GSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAP------GAPGEKGEG 68
GSP L P PG PG G PG G G PG G G G P G PG KG+
Sbjct: 1354 GSPGLPGFLGPRGPPGEPGEKGVPGKEGVPGKPGEPGFKGERGDPGIKGDKGPPGGKGQP 1413
Query: 69 GRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSES 113
G PG+PG +G G G G G GP G P + F R ES
Sbjct: 1414 GDPGIPGHKGHTGLMGPQGLPGENGPVGPPGPPGQPGFPGLRGES 1458
Score = 72.4 bits (176), Expect = 3e-13
Identities = 41/101 (40%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 30 GHPGLPGTPGHHGSQGLPGR------DGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPR 83
G G PG GH G+ G PG +GRDG G G G+KG+ G PG+PG G GP
Sbjct: 657 GEQGAPGPRGHQGAPGPPGARGPIGPEGRDGPPGLQGLRGKKGDMGPPGIPGLLGLQGPP 716
Query: 84 GEAGPAGPTGPAGECSVPPRSAFSAKRSE--SRVPPPSDAP 122
G G GP GP G +P F K PP D P
Sbjct: 717 GPPGVPGPPGPGGSPGLPGEIGFPGKPGPPGPTGPPGKDGP 757
Score = 70.5 bits (171), Expect = 1e-12
Identities = 37/69 (53%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGP 88
PGH G PG G GS G PG G G+DG G G GE G PG GPRGDPG G GP
Sbjct: 921 PGHVGAPGPSGPPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGDPGAPGLPGP 980
Query: 89 AGPTGPAGE 97
G G GE
Sbjct: 981 PG-KGKDGE 988
Score = 70.1 bits (170), Expect = 2e-12
Identities = 43/122 (35%), Positives = 53/122 (43%), Gaps = 27/122 (22%)
Query: 22 NKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAP------------------- 62
N P PG PGLPG G G G PGR+G +G+ G G P
Sbjct: 1115 NDCPPGPPGLPGLPGFKGDKGVPGKPGREGTEGKKGEAGPPGLPGPPGIAGPQGSQGERG 1174
Query: 63 -----GEKGEGGRPGLP---GPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESR 114
G+KG+ G PG+P GP G+PGP G G AG GP G P + + S
Sbjct: 1175 ADGEVGQKGDQGHPGVPGFMGPPGNPGPPGADGIAGAAGPPGIQGSPGKEGPPGPQGPSG 1234
Query: 115 VP 116
+P
Sbjct: 1235 LP 1236
Score = 69.7 bits (169), Expect = 2e-12
Identities = 41/114 (35%), Positives = 50/114 (43%), Gaps = 35/114 (30%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGA-----------------------------P 59
PG PG G PG G G PGR G+ G +G P
Sbjct: 1502 PGPPGKDGLPGRAGPMGEPGRPGQGGLEGPSGPIGPKGERGAKGDPGAPGVGLRGEMGPP 1561
Query: 60 GAPGEKGE-----GGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSA 108
G PG+ GE G PG+PGP+G+ GP G G GP GP G+C P + A+ A
Sbjct: 1562 GIPGQPGEPGYAKDGLPGIPGPQGETGPAGHPGLPGPPGPPGQCD-PSQCAYFA 1614
Score = 69.3 bits (168), Expect = 3e-12
Identities = 34/71 (47%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 29 PGHPGLP---GTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGE 85
PG PG P G PG G +G G G G G G PG+ G+ G+ G PGP G GP+GE
Sbjct: 574 PGLPGPPGRVGAPGLQGERGEKGTRGEKGERGLDGFPGKPGDTGQQGRPGPSGVAGPQGE 633
Query: 86 AGPAGPTGPAG 96
G GP GP G
Sbjct: 634 KGDVGPAGPPG 644
Score = 68.6 bits (166), Expect = 5e-12
Identities = 39/97 (40%), Positives = 44/97 (45%), Gaps = 11/97 (11%)
Query: 14 AGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGA---------PGE 64
AG P L SL HP +PG G G +G PG G G G PG PG
Sbjct: 845 AGPPGLPGTT--SLFTPHPRMPGEQGPKGEKGDPGLPGEPGLQGRPGELGPQGPTGPPGA 902
Query: 65 KGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVP 101
KG+ G G PG G+PG G G GP+GP G P
Sbjct: 903 KGQEGAHGAPGAAGNPGAPGHVGAPGPSGPPGSVGAP 939
Score = 68.6 bits (166), Expect = 5e-12
Identities = 37/95 (38%), Positives = 43/95 (45%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPA 89
G G PG PG G QG PG G G G PGA G++G G PG G G PG G GP+
Sbjct: 871 GEKGDPGLPGEPGLQGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGHVGAPGPS 930
Query: 90 GPTGPAGECSVPPRSAFSAKRSESRVPPPSDAPLP 124
GP G G + +R E +P P
Sbjct: 931 GPPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGP 965
Score = 68.2 bits (165), Expect = 6e-12
Identities = 39/97 (40%), Positives = 43/97 (44%), Gaps = 24/97 (24%)
Query: 29 PGHPGLPGTPGHHGSQGL---PGRDGRDGRDGAPGAPGEKGEGGRPGLPGP--------- 76
PG PGL G PG G QG PG G++G GAPGA G G G G PGP
Sbjct: 879 PGEPGLQGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGHVGAPGPSGPPGSVGA 938
Query: 77 ------------RGDPGPRGEAGPAGPTGPAGECSVP 101
RG+ G GE G GP GP G+ P
Sbjct: 939 PGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGDPGAP 975
Score = 67.0 bits (162), Expect = 1e-11
Identities = 35/71 (49%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPR---GDPGPRGEA 86
G GLPG PG GS+G+ G G G G PG G +G G PGLPGP G PG +GE
Sbjct: 533 GSLGLPGPPGRDGSKGMRGEPGELGEPGLPGEVGMRGPQGPPGLPGPPGRVGAPGLQGER 592
Query: 87 GPAGPTGPAGE 97
G G G GE
Sbjct: 593 GEKGTRGEKGE 603
Score = 66.6 bits (161), Expect = 2e-11
Identities = 35/81 (43%), Positives = 43/81 (53%), Gaps = 11/81 (13%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGR------DGRDGAPGAPGEKGEGGRPGLPGP-----R 77
PG G PG+ G G +G PG+DG G +G+PG G +G+ G PGLPGP
Sbjct: 927 PGPSGPPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGDPGAPGLPGPPGKGKD 986
Query: 78 GDPGPRGEAGPAGPTGPAGEC 98
G+PG RG G GP G C
Sbjct: 987 GEPGLRGSPGLPGPLGTKAAC 1007
Score = 66.6 bits (161), Expect = 2e-11
Identities = 31/67 (46%), Positives = 37/67 (55%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPA 89
G G PG G G+ GLPG++G G+DG G G +G G G PG G PG GE GP+
Sbjct: 1282 GDSGAPGPRGESGAMGLPGQEGLPGKDGDTGPTGPQGPQGPRGPPGKNGSPGSPGEPGPS 1341
Query: 90 GPTGPAG 96
G G G
Sbjct: 1342 GTPGQKG 1348
Score = 66.6 bits (161), Expect = 2e-11
Identities = 36/96 (37%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAP---GEKGEGGRPGLPGPRGDPGPRGEA 86
G PGLPG G G G PG G G++G PG P G KGE G PG+ G +G PG +G+
Sbjct: 1354 GSPGLPGFLGPRGPPGEPGEKGVPGKEGVPGKPGEPGFKGERGDPGIKGDKGPPGGKGQP 1413
Query: 87 GPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAP 122
G G G G + + P P P
Sbjct: 1414 GDPGIPGHKGHTGLMGPQGLPGENGPVGPPGPPGQP 1449
Score = 66.2 bits (160), Expect = 2e-11
Identities = 33/68 (48%), Positives = 36/68 (52%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPA 89
G G+ G PG G GLPG G G G PG PG G G PGL G RG+ G RGE G
Sbjct: 545 GSKGMRGEPGELGEPGLPGEVGMRGPQGPPGLPGPPGRVGAPGLQGERGEKGTRGEKGER 604
Query: 90 GPTGPAGE 97
G G G+
Sbjct: 605 GLDGFPGK 612
Score = 66.2 bits (160), Expect = 2e-11
Identities = 41/102 (40%), Positives = 46/102 (45%), Gaps = 15/102 (14%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGL-----PGPRG------ 78
G PG G+PG G G PG G GRDGAPG PGE+G G+PGL PG
Sbjct: 1054 GPPGDKGSPGSRGLPGFPGPQGPAGRDGAPGNPGERGPPGKPGLSSLLSPGDINLLAKDV 1113
Query: 79 ----DPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVP 116
PGP G G G G G P R K+ E+ P
Sbjct: 1114 CNDCPPGPPGLPGLPGFKGDKGVPGKPGREGTEGKKGEAGPP 1155
Score = 64.7 bits (156), Expect = 7e-11
Identities = 34/72 (47%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 29 PGHPGLPGTPGHHGS---QGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGE 85
PG G PG PGH G+ G PG G G G PG GE+GE G G G G GPRG+
Sbjct: 912 PGAAGNPGAPGHVGAPGPSGPPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGD 971
Query: 86 AGPAGPTGPAGE 97
G G GP G+
Sbjct: 972 PGAPGLPGPPGK 983
Score = 64.7 bits (156), Expect = 7e-11
Identities = 40/101 (39%), Positives = 45/101 (44%), Gaps = 15/101 (14%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGD------PGPR 83
G G PG PG G G PG G DG GA G PG +G G+ G PGP+G PG
Sbjct: 1183 GDQGHPGVPGFMGPPGNPGPPGADGIAGAAGPPGIQGSPGKEGPPGPQGPSGLPGIPGEE 1242
Query: 84 GEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAPLP 124
G+ G G GP GE K E +P P A P
Sbjct: 1243 GKEGRDGKPGPPGE---------PGKAGEPGLPGPEGARGP 1274
Score = 64.3 bits (155), Expect = 9e-11
Identities = 33/61 (54%), Positives = 33/61 (54%)
Query: 36 GTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPA 95
G G GS GLPG GRDG G G PGE GE G PG G RG GP G GP G G
Sbjct: 527 GEKGEKGSLGLPGPPGRDGSKGMRGEPGELGEPGLPGEVGMRGPQGPPGLPGPPGRVGAP 586
Query: 96 G 96
G
Sbjct: 587 G 587
Score = 63.9 bits (154), Expect = 1e-10
Identities = 40/94 (42%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Query: 13 AAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGA----------PGAP 62
A G P + K G GLPG G G +G G G G G PG
Sbjct: 808 APGFPGVRGEKGDQGEKGELGLPGLKGDRGEKGEAGPAGPPGLPGTTSLFTPHPRMPGEQ 867
Query: 63 GEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAG 96
G KGE G PGLPG G G GE GP GPTGP G
Sbjct: 868 GPKGEKGDPGLPGEPGLQGRPGELGPQGPTGPPG 901
Score = 63.5 bits (153), Expect = 2e-10
Identities = 40/102 (39%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Query: 29 PGHPGLPGTPGH------HGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGP 82
PG PG PG G G G PG G++G GAPGA G G G G PGP G PG
Sbjct: 876 PGLPGEPGLQGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGHVGAPGPSGPPGS 935
Query: 83 RGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAPLP 124
G G G G GE + A + S V P D P
Sbjct: 936 VGAPGLRGTPGKDGERG--EKGAAGEEGSPGPVGPRGDPGAP 975
Score = 63.5 bits (153), Expect = 2e-10
Identities = 36/83 (43%), Positives = 39/83 (46%), Gaps = 15/83 (18%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGP------------ 76
PG PG PG G GSQG G DG G+ G G PG G G PG PGP
Sbjct: 1155 PGLPGPPGIAGPQGSQGERGADGEVGQKGDQGHPGVPGFMGPPGNPGPPGADGIAGAAGP 1214
Query: 77 ---RGDPGPRGEAGPAGPTGPAG 96
+G PG G GP GP+G G
Sbjct: 1215 PGIQGSPGKEGPPGPQGPSGLPG 1237
Score = 63.2 bits (152), Expect = 2e-10
Identities = 31/68 (45%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPA 89
G PG+PG+PG G G+ G G G G PG G G G PG PGP+G G G G
Sbjct: 1028 GAPGIPGSPGSRGDPGI-GVAGPPGPSGPPGDKGSPGSRGLPGFPGPQGPAGRDGAPGNP 1086
Query: 90 GPTGPAGE 97
G GP G+
Sbjct: 1087 GERGPPGK 1094
Score = 61.6 bits (148), Expect = 6e-10
Identities = 41/121 (33%), Positives = 49/121 (40%), Gaps = 35/121 (28%)
Query: 15 GSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLP--------GRDGRDGRDGAPGAP---- 62
G+P D + G G PG G G G P G+DG G G+PG P
Sbjct: 943 GTPGKDGERGEKGAAGEEGSPGPVGPRGDPGAPGLPGPPGKGKDGEPGLRGSPGLPGPLG 1002
Query: 63 ----------------------GEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSV 100
G++G G PG PG RGDPG G AGP GP+GP G+
Sbjct: 1003 TKAACGKVRGSENCALGGQCVKGDRGAPGIPGSPGSRGDPG-IGVAGPPGPSGPPGDKGS 1061
Query: 101 P 101
P
Sbjct: 1062 P 1062
Score = 60.8 bits (146), Expect = 1e-09
Identities = 37/94 (39%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Query: 30 GHPGLPGTPGHHGSQG-LPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGP 88
G PGLPGT +PG G G G PG PGE G GRPG GP+G GP G G
Sbjct: 846 GPPGLPGTTSLFTPHPRMPGEQGPKGEKGDPGLPGEPGLQGRPGELGPQGPTGPPGAKGQ 905
Query: 89 AGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAP 122
G G G P S P AP
Sbjct: 906 EGAHGAPGAAGNPGAPGHVGAPGPSGPPGSVGAP 939
Score = 58.9 bits (141), Expect = 4e-09
Identities = 33/78 (42%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 30 GHPGLPGTPGHHGSQGL----PGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGE 85
G G PG G G G+ G G G G PG PG G G G PG G+PG GE
Sbjct: 505 GPVGAPGPKGEKGDVGIGPFGQGEKGEKGSLGLPGPPGRDGSKGMRGEPGELGEPGLPGE 564
Query: 86 AGPAGPTGPAGECSVPPR 103
G GP GP G P R
Sbjct: 565 VGMRGPQGPPGLPGPPGR 582
Score = 58.2 bits (139), Expect = 7e-09
Identities = 30/57 (52%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 43 SQGLPGRDGRDGRDGAPGAPGEKGEGGRP---GLPGPRGDPGPRGEAGPAGPTGPAG 96
SQG PG G G+DG PG G GE GRP GL GP G GP+GE G G G G
Sbjct: 1495 SQGRPGPPGPPGKDGLPGRAGPMGEPGRPGQGGLEGPSGPIGPKGERGAKGDPGAPG 1551
Score = 57.4 bits (137), Expect = 1e-08
Identities = 46/137 (33%), Positives = 49/137 (35%), Gaps = 42/137 (30%)
Query: 29 PGHPGLPGTPGH--------HGSQGLPGRDGRD--------------------GRDGAPG 60
PG PGLPG PG GS GLPG G G GAPG
Sbjct: 972 PGAPGLPGPPGKGKDGEPGLRGSPGLPGPLGTKAACGKVRGSENCALGGQCVKGDRGAPG 1031
Query: 61 APGEKGEGGRPGL-----PGPRGDPGPRGEAG---------PAGPTGPAGECSVPPRSAF 106
PG G G PG+ PGP G PG +G G P GP G G P
Sbjct: 1032 IPGSPGSRGDPGIGVAGPPGPSGPPGDKGSPGSRGLPGFPGPQGPAGRDGAPGNPGERGP 1091
Query: 107 SAKRSESRVPPPSDAPL 123
K S + P D L
Sbjct: 1092 PGKPGLSSLLSPGDINL 1108
Score = 57.0 bits (136), Expect = 1e-08
Identities = 46/145 (31%), Positives = 51/145 (35%), Gaps = 62/145 (42%)
Query: 15 GSPPLDDNKIPSLCPGHPGLPGTPGHHGS------QGLPGRD---GRDGRDGAPGAPGEK 65
G P + +K P G PG PG PGH G QGLPG + G G G PG PG +
Sbjct: 1396 GDPGIKGDKGPPGGKGQPGDPGIPGHKGHTGLMGPQGLPGENGPVGPPGPPGQPGFPGLR 1455
Query: 66 GEG--------------------------------------GRPGLPGPRGD-------- 79
GE GRPG PGP G
Sbjct: 1456 GESPSMETLRRLIQEELGKQLETRLAYLLAQMPPAYMKSSQGRPGPPGPPGKDGLPGRAG 1515
Query: 80 -------PGPRGEAGPAGPTGPAGE 97
PG G GP+GP GP GE
Sbjct: 1516 PMGEPGRPGQGGLEGPSGPIGPKGE 1540
Score = 55.8 bits (133), Expect = 3e-08
Identities = 31/69 (44%), Positives = 33/69 (47%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGP 88
P G G G G G PGRDG G G PG GE G G G+ GP+G PG G G
Sbjct: 523 PFGQGEKGEKGSLGLPGPPGRDGSKGMRGEPGELGEPGLPGEVGMRGPQGPPGLPGPPGR 582
Query: 89 AGPTGPAGE 97
G G GE
Sbjct: 583 VGAPGLQGE 591
Score = 53.5 bits (127), Expect = 2e-07
Identities = 33/77 (42%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDG--RDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEA 86
PG PG+ G G G G+PG+ G G +DG PG PG +GE G G PG PGP G
Sbjct: 1547 PGAPGV-GLRGEMGPPGIPGQPGEPGYAKDGLPGIPGPQGETGPAGHPGL---PGPPGPP 1602
Query: 87 GPAGPTGPAGECSVPPR 103
G P+ A S+ R
Sbjct: 1603 GQCDPSQCAYFASLAAR 1619
Score = 44.3 bits (103), Expect = 1e-04
Identities = 20/43 (46%), Positives = 23/43 (53%)
Query: 60 GAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPP 102
G GE G G GLPGP+GD G G G GP G G+ + P
Sbjct: 481 GEKGEMGVAGPMGLPGPKGDIGAIGPVGAPGPKGEKGDVGIGP 523
>gi|5901944 elastin microfibril interfacer 1 [Homo sapiens]
Length = 1016
Score = 86.7 bits (213), Expect = 2e-17
Identities = 71/218 (32%), Positives = 102/218 (46%), Gaps = 35/218 (16%)
Query: 34 LPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTG 93
L G G G G PG G G G PG+PG+ G+ G G PGP+G+ G G PA P
Sbjct: 812 LTGPAGEAGPPGPPGLQGPPGPAGPPGSPGKDGQEGPIGPPGPQGEQGVEG--APAAPV- 868
Query: 94 PAGECSVPPRSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYF 153
P+ AFSA S R P +PFDRVL+N+ G+YD TG FT + G Y
Sbjct: 869 --------PQVAFSAALSLPRSEP---GTVPFDRVLLNDGGYYDPETGVFTAPLAGRYLL 917
Query: 154 AVHATVYR-ASLQFDLVKNGESIASFFQFFGGW--------------PKPASLSGGAMV- 197
+ T +R ++ L ++ + +A GG+ P P +L +++
Sbjct: 918 SAVLTGHRHEKVEAVLSRSNQGVARVDS--GGYEPEGLENKPVAESQPSPGTLGVFSLIL 975
Query: 198 RLEPEDQVWVQVGVGDYIGIYASIKTDSTFSGFLVYSD 235
L+ D V V + +G + S + + FSG L+Y D
Sbjct: 976 PLQAGDTVCVDLVMGQ---LAHSEEPLTIFSGALLYGD 1010
>gi|29725624 collagen, type XXIII, alpha 1 [Homo sapiens]
Length = 540
Score = 86.3 bits (212), Expect = 2e-17
Identities = 49/107 (45%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 25 PSLC---PGHPGLPGTPGHHGSQGLPGRDGRDGR------DGAPGAPGEKGEGGRPGLPG 75
PS C PG PG G PG G G PG+ GRDG DG PG PG KGE G PG G
Sbjct: 113 PSECVCPPGPPGRRGKPGRRGDPGPPGQSGRDGYPGPLGLDGKPGLPGPKGEKGAPGDFG 172
Query: 76 PRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAP 122
PRGD G G AGP GP GP G P + R P P
Sbjct: 173 PRGDQGQDGAAGPPGPPGPPGARGPPGDTGKDGPRGAQGPAGPKGEP 219
Score = 80.9 bits (198), Expect = 9e-16
Identities = 49/117 (41%), Positives = 52/117 (44%), Gaps = 22/117 (18%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGA---------------------PGEKGE 67
PG PG PG PG G QG+ G G DG G GA PG KGE
Sbjct: 411 PGPPGPPGPPGPMGLQGIQGPKGLDGAKGEKGASGERGPSGLPGPVGPPGLIGLPGTKGE 470
Query: 68 GGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAPLP 124
GRPG PG G PGPRGE G G GE VP R ++ E PP D P P
Sbjct: 471 KGRPGEPGLDGFPGPRGEKGDRSERGEKGERGVPGRKGVKGQKGEPG-PPGLDQPCP 526
Score = 78.6 bits (192), Expect = 5e-15
Identities = 38/82 (46%), Positives = 43/82 (52%)
Query: 15 GSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLP 74
G P D P PG G PG PG G G P + G G G PG+ G +GE G G P
Sbjct: 217 GEPGQDGEMGPKGPPGPKGEPGVPGKKGDDGTPSQPGPPGPKGEPGSMGPRGENGVDGAP 276
Query: 75 GPRGDPGPRGEAGPAGPTGPAG 96
GP+G+PG RG G AGP G G
Sbjct: 277 GPKGEPGHRGTDGAAGPRGAPG 298
Score = 68.6 bits (166), Expect = 5e-12
Identities = 39/88 (44%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 14 AGSPPLDDNKI-PSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPG 72
A PP D K P G G G PG G G G G G G PG G+ G +PG
Sbjct: 194 ARGPPGDTGKDGPRGAQGPAGPKGEPGQDGEMGPKGPPGPKGEPGVPGKKGDDGTPSQPG 253
Query: 73 LPGPRGDP---GPRGEAGPAGPTGPAGE 97
PGP+G+P GPRGE G G GP GE
Sbjct: 254 PPGPKGEPGSMGPRGENGVDGAPGPKGE 281
Score = 67.4 bits (163), Expect = 1e-11
Identities = 37/89 (41%), Positives = 40/89 (44%), Gaps = 17/89 (19%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGE---- 85
G P PG PG G G G G +G DGAPG GE G G G GPRG PG +GE
Sbjct: 247 GTPSQPGPPGPKGEPGSMGPRGENGVDGAPGPKGEPGHRGTDGAAGPRGAPGLKGEQGDT 306
Query: 86 -------------AGPAGPTGPAGECSVP 101
GP GP GP G +P
Sbjct: 307 VVIDYDGRILDALKGPPGPQGPPGPPGIP 335
Score = 67.0 bits (162), Expect = 1e-11
Identities = 42/117 (35%), Positives = 49/117 (41%), Gaps = 24/117 (20%)
Query: 30 GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGR---------------PGLP 74
G G PG PG G++G PG G+DG GA G G KGE G+ PG+P
Sbjct: 181 GAAGPPGPPGPPGARGPPGDTGKDGPRGAQGPAGPKGEPGQDGEMGPKGPPGPKGEPGVP 240
Query: 75 GPRGD---------PGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAP 122
G +GD PGP+GE G GP G G P R P AP
Sbjct: 241 GKKGDDGTPSQPGPPGPKGEPGSMGPRGENGVDGAPGPKGEPGHRGTDGAAGPRGAP 297
Score = 65.5 bits (158), Expect = 4e-11
Identities = 39/93 (41%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 13 AAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPG 72
A G + PS PG G PG G G++G GR G G DG PG GEKG+ G
Sbjct: 437 AKGEKGASGERGPSGLPGPVGPPGLIGLPGTKGEKGRPGEPGLDGFPGPRGEKGDRSERG 496
Query: 73 LPGPRGDPGPRGEAGPAGPTGPAG---ECSVPP 102
G RG PG +G G G GP G C V P
Sbjct: 497 EKGERGVPGRKGVKGQKGEPGPPGLDQPCPVGP 529
Score = 63.5 bits (153), Expect = 2e-10
Identities = 44/131 (33%), Positives = 47/131 (35%), Gaps = 37/131 (28%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGE------KGEGGRPGL--------- 73
PG PG+PG G G G PG DG G G G PGE KGE G GL
Sbjct: 329 PGPPGIPGAKGELGLPGAPGIDGEKGPKGQKGDPGEPGPAGLKGEAGEMGLSGLPGADGL 388
Query: 74 ----------------------PGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRS 111
PGP G PGP G G G GP G S +R
Sbjct: 389 KGEKGESASDSLQESLAQLIVEPGPPGPPGPPGPMGLQGIQGPKGLDGAKGEKGASGERG 448
Query: 112 ESRVPPPSDAP 122
S +P P P
Sbjct: 449 PSGLPGPVGPP 459
Score = 62.0 bits (149), Expect = 5e-10
Identities = 36/79 (45%), Positives = 38/79 (48%)
Query: 19 LDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRG 78
LD K P G PG PG PG G GLPG G DG G G G+ GE G GL G G
Sbjct: 316 LDALKGPPGPQGPPGPPGIPGAKGELGLPGAPGIDGEKGPKGQKGDPGEPGPAGLKGEAG 375
Query: 79 DPGPRGEAGPAGPTGPAGE 97
+ G G G G G GE
Sbjct: 376 EMGLSGLPGADGLKGEKGE 394
Score = 60.1 bits (144), Expect = 2e-09
Identities = 37/91 (40%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 21 DNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDP 80
D +I G PG G PG G+PG G G GAPG GEKG G+ G PG G
Sbjct: 312 DGRILDALKGPPGPQGPPG---PPGIPGAKGELGLPGAPGIDGEKGPKGQKGDPGEPGPA 368
Query: 81 GPRGEAGPAGPTGPAGECSVPPRSAFSAKRS 111
G +GEAG G +G G + SA S
Sbjct: 369 GLKGEAGEMGLSGLPGADGLKGEKGESASDS 399
Score = 59.7 bits (143), Expect = 2e-09
Identities = 40/114 (35%), Positives = 45/114 (39%), Gaps = 29/114 (25%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGR------DGR--------------DGAPGAPGEKGEG 68
PGH G G G G+ GL G G DGR G PG PG KGE
Sbjct: 282 PGHRGTDGAAGPRGAPGLKGEQGDTVVIDYDGRILDALKGPPGPQGPPGPPGIPGAKGEL 341
Query: 69 GRPGLPG---------PRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSES 113
G PG PG +GDPG G AG G G G +P ++ ES
Sbjct: 342 GLPGAPGIDGEKGPKGQKGDPGEPGPAGLKGEAGEMGLSGLPGADGLKGEKGES 395
Score = 58.2 bits (139), Expect = 7e-09
Identities = 33/94 (35%), Positives = 43/94 (45%)
Query: 29 PGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGP 88
PG G PG PG G++G G G G DG G G+KG+ G PG G +G+ G G +G
Sbjct: 323 PGPQGPPGPPGIPGAKGELGLPGAPGIDGEKGPKGQKGDPGEPGPAGLKGEAGEMGLSGL 382
Query: 89 AGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAP 122
G G GE + ++ V P P
Sbjct: 383 PGADGLKGEKGESASDSLQESLAQLIVEPGPPGP 416
Score = 57.4 bits (137), Expect = 1e-08
Identities = 39/115 (33%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 17 PPLDDNKIPSLCP-GHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGE------GG 69
PP + S+ P G G+ G PG G G G DG G GAPG GE+G+ G
Sbjct: 254 PPGPKGEPGSMGPRGENGVDGAPGPKGEPGHRGTDGAAGPRGAPGLKGEQGDTVVIDYDG 313
Query: 70 R-----PGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPS 119
R G PGP+G PGP G G G G G + ++ + P P+
Sbjct: 314 RILDALKGPPGPQGPPGPPGIPGAKGELGLPGAPGIDGEKGPKGQKGDPGEPGPA 368
Score = 38.1 bits (87), Expect = 0.007
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 49 RDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAG 96
R R+ PG G G+ PG RGDPGP G++G G GP G
Sbjct: 107 RTAREAPSECVCPPGPPGRRGK---PGRRGDPGPPGQSGRDGYPGPLG 151
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.141 0.454
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,235,287
Number of Sequences: 37866
Number of extensions: 999791
Number of successful extensions: 37226
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 366
Number of HSP's successfully gapped in prelim test: 835
Number of HSP's that attempted gapping in prelim test: 6548
Number of HSP's gapped (non-prelim): 9464
length of query: 243
length of database: 18,247,518
effective HSP length: 99
effective length of query: 144
effective length of database: 14,498,784
effective search space: 2087824896
effective search space used: 2087824896
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.