MBD3 28982

Name: MBD3	Sequence: fasta or formatted (291aa)		NCBI GI: 4505119
Description: methyl-CpG binding domain protein 3		Referenced in: DNA Methylation Histones, Related Proteins, and Modifying Enzymes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.2 21 2 C cysteine 1.4 4 1 D aspartate 7.2 21 3 E glutamate 10.3 30 7 F phenylalanine 2.7 8 1 G glycine 5.5 16 2 H histidine 1.7 5 1 I isoleucine 2.1 6 1 K lysine 7.9 23 2 L leucine 8.9 26 2 M methionine 3.8 11 1 N asparagine 2.7 8 1 P proline 6.9 20 1 Q glutamine 5.2 15 2 R arginine 6.2 18 2 S serine 6.5 19 2 T threonine 5.2 15 2 V valine 5.8 17 1 W tryptophan 1.4 4 1 Y tyrosine 1.4 4 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 methyl-CpG binding domain protein 3 MBD2 0.662 methyl-CpG binding domain protein 2 isoform 1 MBD3L1 0.218 methyl-CpG binding domain protein 3-like MBD2 0.189 methyl-CpG binding domain protein 2 testis-specific i... LOC100134199 0.101 PREDICTED: similar to methyl-CpG binding domain pro... MBD3L2 0.097 methyl-CpG binding domain protein 3-like 2 MBD3L5 0.097 hypothetical protein LOC284428 MBD3L3 0.096 PREDICTED: methyl-CpG-binding domain protein 3-like ... LOC729458 0.096 PREDICTED: similar to methyl-CpG binding domain pro... MBD3L4 0.096 PREDICTED: methyl-CpG-binding domain protein 3-like ... MBD1 0.087 methyl-CpG binding domain protein 1 isoform 2 MBD1 0.087 methyl-CpG binding domain protein 1 isoform 4 MBD1 0.087 methyl-CpG binding domain protein 1 isoform PCM1 [Ho... MBD1 0.087 methyl-CpG binding domain protein 1 isoform 1 MBD1 0.087 methyl-CpG binding domain protein 1 isoform 3 [Homo... MECP2 0.053 methyl CpG binding protein 2 isoform 2 MECP2 0.053 methyl CpG binding protein 2 isoform 1 MBD4 0.044 methyl-CpG binding domain protein 4 RANGAP1 0.027 Ran GTPase activating protein 1 BAZ2B 0.027 bromodomain adjacent to zinc finger domain, 2B [Homo... WDR52 0.025 WD repeat domain 52 G3BP2 0.025 Ras-GTPase activating protein SH3 domain-binding pro... G3BP2 0.025 Ras-GTPase activating protein SH3 domain-binding pro... G3BP2 0.025 Ras-GTPase activating protein SH3 domain-binding pro... RGAG4 0.025 retrotransposon gag domain containing 4 MYT1 0.023 myelin transcription factor 1 HMGB1L1 0.023 high-mobility group box 1-like 1 MIER1 0.023 mesoderm induction early response 1 isoform g [Homo... MIER1 0.023 mesoderm induction early response 1 isoform h [Homo... MIER1 0.023 mesoderm induction early response 1 isoform a [Homo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.