Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 71143132
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|71143132 carcinoembryonic antigen-related cell adhesion
molecule 4 [Homo sapiens]
(244 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|71143132 carcinoembryonic antigen-related cell adhesion molec... 496 e-141
gi|121114300 carcinoembryonic antigen-related cell adhesion mole... 318 2e-87
gi|40255013 carcinoembryonic antigen-related cell adhesion molec... 165 3e-41
gi|21314600 carcinoembryonic antigen-related cell adhesion molec... 159 2e-39
gi|68161541 carcinoembryonic antigen-related cell adhesion molec... 151 4e-37
gi|19923195 carcinoembryonic antigen-related cell adhesion molec... 151 4e-37
gi|98986445 carcinoembryonic antigen-related cell adhesion molec... 148 4e-36
gi|52317156 carcinoembryonic antigen-related cell adhesion molec... 143 2e-34
gi|148612793 carcinoembryonic antigen-related cell adhesion mole... 143 2e-34
gi|194097369 pregnancy specific beta-1-glycoprotein 5 [Homo sapi... 142 3e-34
gi|194097367 pregnancy specific beta-1-glycoprotein 5 [Homo sapi... 142 3e-34
gi|157805480 pregnancy specific beta-1-glycoprotein 7 precursor ... 140 1e-33
gi|5901930 carcinoembryonic antigen-related cell adhesion molecu... 140 1e-33
gi|156616282 pregnancy specific beta-1-glycoprotein 2 [Homo sapi... 139 3e-33
gi|194328710 pregnancy specific beta-1-glycoprotein 8 isoform b ... 138 5e-33
gi|51510887 pregnancy specific beta-1-glycoprotein 8 isoform a [... 138 5e-33
gi|47419900 pregnancy specific beta-1-glycoprotein 4 isoform 2 [... 136 2e-32
gi|42560235 pregnancy specific beta-1-glycoprotein 4 isoform 1 [... 136 2e-32
gi|164663836 pregnancy specific beta-1-glycoprotein 11 isoform 1... 135 3e-32
gi|4506175 pregnancy specific beta-1-glycoprotein 6 isoform a [H... 132 2e-31
gi|73661174 pregnancy specific beta-1-glycoprotein 6 isoform b [... 132 2e-31
gi|109240546 pregnancy specific beta-1-glycoprotein 3 [Homo sapi... 132 2e-31
gi|21361392 pregnancy specific beta-1-glycoprotein 1 [Homo sapiens] 132 3e-31
gi|156616284 pregnancy specific beta-1-glycoprotein 9 [Homo sapi... 131 6e-31
gi|85861202 carcinoembryonic antigen-related cell adhesion molec... 76 2e-14
gi|189217881 carcinoembryonic antigen-related cell adhesion mole... 67 1e-11
gi|45267817 carcinoembryonic antigen-related cell adhesion molec... 67 1e-11
gi|122937205 carcinoembryonic antigen-related cell adhesion mole... 54 1e-07
gi|156564390 carcinoembryonic antigen-related cell adhesion mole... 48 9e-06
gi|156564378 carcinoembryonic antigen-related cell adhesion mole... 48 9e-06
>gi|71143132 carcinoembryonic antigen-related cell adhesion molecule
4 [Homo sapiens]
Length = 244
Score = 496 bits (1277), Expect = e-141
Identities = 244/244 (100%), Positives = 244/244 (100%)
Query: 1 MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE 60
MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE
Sbjct: 1 MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE 60
Query: 61 TIQAYYWHKGKTAEGSPLIAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSY 120
TIQAYYWHKGKTAEGSPLIAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSY
Sbjct: 61 TIQAYYWHKGKTAEGSPLIAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSY 120
Query: 121 TLRTINASYDSDQATGQLHVHQNNVPGLPVGAVAGIVTGVLVGVALVAALVCFLLLSRTG 180
TLRTINASYDSDQATGQLHVHQNNVPGLPVGAVAGIVTGVLVGVALVAALVCFLLLSRTG
Sbjct: 121 TLRTINASYDSDQATGQLHVHQNNVPGLPVGAVAGIVTGVLVGVALVAALVCFLLLSRTG 180
Query: 181 RASIQRDLREQPPPASTPGHGPSHRSTFSAPLPSPRTATPIYEELLYSDANIYCQIDHKA 240
RASIQRDLREQPPPASTPGHGPSHRSTFSAPLPSPRTATPIYEELLYSDANIYCQIDHKA
Sbjct: 181 RASIQRDLREQPPPASTPGHGPSHRSTFSAPLPSPRTATPIYEELLYSDANIYCQIDHKA 240
Query: 241 DVVS 244
DVVS
Sbjct: 241 DVVS 244
>gi|121114300 carcinoembryonic antigen-related cell adhesion
molecule 3 precursor [Homo sapiens]
Length = 252
Score = 318 bits (816), Expect = 2e-87
Identities = 158/252 (62%), Positives = 188/252 (74%), Gaps = 8/252 (3%)
Query: 1 MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE 60
MGPPSA+P PWQGLL+TASLL FW+PPTT + TIE++P S AEGK+VLLL N+ +
Sbjct: 1 MGPPSASPHRECIPWQGLLLTASLLNFWNPPTTAKLTIESMPLSVAEGKEVLLLVHNLPQ 60
Query: 61 TIQAYYWHKGKTAEGSPLIAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSY 120
+ Y W+KG+ +G+ LI GY+ Q PGAAYSGRET+Y N SLL QN+T D G Y
Sbjct: 61 HLFGYSWYKGERVDGNSLIVGYVIGTQQATPGAAYSGRETIYTNASLLIQNVTQNDIGFY 120
Query: 121 TLRTINASYDSDQATGQLHVHQNNVPGLPVGAVAGIVTGVLVGVALVAALVCFLLLSRTG 180
TL+ I + +++ATGQ HV+Q N PGLPVGAVAGIVTGVLVGVALVAALVCFLLL++TG
Sbjct: 121 TLQVIKSDLVNEEATGQFHVYQENAPGLPVGAVAGIVTGVLVGVALVAALVCFLLLAKTG 180
Query: 181 RASIQRDLREQPPPASTPGHGPSHRSTFS--------APLPSPRTATPIYEELLYSDANI 232
R SIQRDL+EQ P A PG GPSH S FS APLP+PRTA IYEELL D NI
Sbjct: 181 RTSIQRDLKEQQPQALAPGRGPSHSSAFSMSPLSTAQAPLPNPRTAASIYEELLKHDTNI 240
Query: 233 YCQIDHKADVVS 244
YC++DHKA+V S
Sbjct: 241 YCRMDHKAEVAS 252
>gi|40255013 carcinoembryonic antigen-related cell adhesion molecule
6 (non-specific cross reacting antigen) [Homo sapiens]
Length = 344
Score = 165 bits (418), Expect = 3e-41
Identities = 80/154 (51%), Positives = 106/154 (68%), Gaps = 4/154 (2%)
Query: 1 MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE 60
MGPPSA P H PW+ +L+TASLLTFW+PPTT + TIE+ P + AEGK+VLLLA N+ +
Sbjct: 1 MGPPSAPPCRLHVPWKEVLLTASLLTFWNPPTTAKLTIESTPFNVAEGKEVLLLAHNLPQ 60
Query: 61 TIQAYYWHKGKTAEGSPLIAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSY 120
Y W+KG+ +G+ LI GY+ Q PG AYSGRET+YPN SLL QN+T D G Y
Sbjct: 61 NRIGYSWYKGERVDGNSLIVGYVIGTQQATPGPAYSGRETIYPNASLLIQNVTQNDTGFY 120
Query: 121 TLRTINASYDSDQATGQLHVHQNNVPGLPVGAVA 154
TL+ I + +++ATGQ HV+ P LP +++
Sbjct: 121 TLQVIKSDLVNEEATGQFHVY----PELPKPSIS 150
Score = 36.6 bits (83), Expect = 0.020
Identities = 34/117 (29%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 61 TIQAYYWHKGKTAEGSPLIAGYITDIQANIPGAAYSGRETVYP---NGS-------LLFQ 110
T+ Y G T SP A Y N+ A S Y NG+ L
Sbjct: 230 TLNVLYGPDGPTI--SPSKANYRPGENLNLSCHAASNPPAQYSWFINGTFQQSTQELFIP 287
Query: 111 NITLEDAGSYTLRTINASYDSDQATGQLHVHQNNVPGLPVGAVAGIVTGVLVGVALV 167
NIT+ ++GSY + N++ ++ T + + P L A GI GVL VAL+
Sbjct: 288 NITVNNSGSYMCQAHNSATGLNRTTVTMITVSGSAPVLSAVATVGITIGVLARVALI 344
>gi|21314600 carcinoembryonic antigen-related cell adhesion molecule
8 [Homo sapiens]
Length = 349
Score = 159 bits (402), Expect = 2e-39
Identities = 77/141 (54%), Positives = 97/141 (68%)
Query: 1 MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE 60
MGP SA PWQGLL+TASL TFW+PPTT Q TIEA+PS+AAEGK+VLLL N+ +
Sbjct: 1 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ 60
Query: 61 TIQAYYWHKGKTAEGSPLIAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSY 120
+ Y W+KG+T + + I GY+ Q PG AYS RET+YPN SLL +N+T D GSY
Sbjct: 61 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY 120
Query: 121 TLRTINASYDSDQATGQLHVH 141
TL+ I + S++ TGQ VH
Sbjct: 121 TLQVIKLNLMSEEVTGQFSVH 141
Score = 37.0 bits (84), Expect = 0.016
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 107 LLFQNITLEDAGSYTLRTINASYDSDQATGQL-----HVHQNNVPGLPVGAVAGIVTGVL 161
L NIT +++GSY T N++ ++ T ++ + Q + PGL A I+ GVL
Sbjct: 284 LFIPNITTKNSGSYACHTTNSATGRNRTTVRMITVSDALVQGSSPGLSARATVSIMIGVL 343
Query: 162 VGVALV 167
VAL+
Sbjct: 344 ARVALI 349
>gi|68161541 carcinoembryonic antigen-related cell adhesion molecule
1 isoform 2 precursor [Homo sapiens]
Length = 464
Score = 151 bits (382), Expect = 4e-37
Identities = 76/154 (49%), Positives = 100/154 (64%), Gaps = 4/154 (2%)
Query: 1 MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE 60
MG SA PWQGLL+TASLLTFW+PPTT Q T E++P + AEGK+VLLL N+ +
Sbjct: 1 MGHLSAPLHRVRVPWQGLLLTASLLTFWNPPTTAQLTTESMPFNVAEGKEVLLLVHNLPQ 60
Query: 61 TIQAYYWHKGKTAEGSPLIAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSY 120
+ Y W+KG+ +G+ I GY Q PG A SGRET+YPN SLL QN+T D G Y
Sbjct: 61 QLFGYSWYKGERVDGNRQIVGYAIGTQQATPGPANSGRETIYPNASLLIQNVTQNDTGFY 120
Query: 121 TLRTINASYDSDQATGQLHVHQNNVPGLPVGAVA 154
TL+ I + +++ATGQ HV+ P LP +++
Sbjct: 121 TLQVIKSDLVNEEATGQFHVY----PELPKPSIS 150
Score = 50.8 bits (120), Expect = 1e-06
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 104 NGSLLFQNITLEDAGSYTLRTINASYDSDQATGQLHVHQNNVP---GLPVGAVAGIVTGV 160
N +L + EDAG+Y N + L+V+ N +P GL GA+AGIV GV
Sbjct: 378 NTTLSINPVKREDAGTYWCEVFNPISKNQSDPIMLNVNYNALPQENGLSPGAIAGIVIGV 437
Query: 161 LVGVALVA-ALVCFLLLSRTG 180
+ VAL+A AL CFL +TG
Sbjct: 438 VALVALIAVALACFLHFGKTG 458
>gi|19923195 carcinoembryonic antigen-related cell adhesion molecule
1 isoform 1 precursor [Homo sapiens]
Length = 526
Score = 151 bits (382), Expect = 4e-37
Identities = 76/154 (49%), Positives = 100/154 (64%), Gaps = 4/154 (2%)
Query: 1 MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE 60
MG SA PWQGLL+TASLLTFW+PPTT Q T E++P + AEGK+VLLL N+ +
Sbjct: 1 MGHLSAPLHRVRVPWQGLLLTASLLTFWNPPTTAQLTTESMPFNVAEGKEVLLLVHNLPQ 60
Query: 61 TIQAYYWHKGKTAEGSPLIAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSY 120
+ Y W+KG+ +G+ I GY Q PG A SGRET+YPN SLL QN+T D G Y
Sbjct: 61 QLFGYSWYKGERVDGNRQIVGYAIGTQQATPGPANSGRETIYPNASLLIQNVTQNDTGFY 120
Query: 121 TLRTINASYDSDQATGQLHVHQNNVPGLPVGAVA 154
TL+ I + +++ATGQ HV+ P LP +++
Sbjct: 121 TLQVIKSDLVNEEATGQFHVY----PELPKPSIS 150
Score = 68.2 bits (165), Expect = 6e-12
Identities = 54/147 (36%), Positives = 72/147 (48%), Gaps = 23/147 (15%)
Query: 104 NGSLLFQNITLEDAGSYTLRTINASYDSDQATGQLHVHQNNVP---GLPVGAVAGIVTGV 160
N +L + EDAG+Y N + L+V+ N +P GL GA+AGIV GV
Sbjct: 378 NTTLSINPVKREDAGTYWCEVFNPISKNQSDPIMLNVNYNALPQENGLSPGAIAGIVIGV 437
Query: 161 LVGVALVA-ALVCFLLLSRTGRASIQRDLREQPPPASTPGHGPSHRS------------- 206
+ VAL+A AL CFL +TGRAS QRDL E P S H H +
Sbjct: 438 VALVALIAVALACFLHFGKTGRASDQRDLTEHKP--SVSNHTQDHSNDPPNKMNEVTYST 495
Query: 207 -TFSAPLPS-PRTATP--IYEELLYSD 229
F A P+ P +A+P E++YS+
Sbjct: 496 LNFEAQQPTQPTSASPSLTATEIIYSE 522
>gi|98986445 carcinoembryonic antigen-related cell adhesion molecule
5 preproprotein [Homo sapiens]
Length = 702
Score = 148 bits (374), Expect = 4e-36
Identities = 75/154 (48%), Positives = 98/154 (63%), Gaps = 4/154 (2%)
Query: 1 MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE 60
M PSA P PWQ LL+TASLLTFW+PPTT + TIE+ P + AEGK+VLLL N+ +
Sbjct: 1 MESPSAPPHRWCIPWQRLLLTASLLTFWNPPTTAKLTIESTPFNVAEGKEVLLLVHNLPQ 60
Query: 61 TIQAYYWHKGKTAEGSPLIAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSY 120
+ Y W+KG+ +G+ I GY+ Q PG AYSGRE +YPN SLL QNI D G Y
Sbjct: 61 HLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNIIQNDTGFY 120
Query: 121 TLRTINASYDSDQATGQLHVHQNNVPGLPVGAVA 154
TL I + +++ATGQ V+ P LP +++
Sbjct: 121 TLHVIKSDLVNEEATGQFRVY----PELPKPSIS 150
Score = 36.6 bits (83), Expect = 0.020
Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 76 SPLIAGYITDIQANI-------PGAAYSGRETVYPNGS---LLFQNITLEDAGSYTLRTI 125
SP + Y++ N+ P YS R P L IT + G+Y
Sbjct: 599 SPPDSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQHTQVLFIAKITPNNNGTY----- 653
Query: 126 NASYDSDQATGQLHVHQNNV--------PGLPVGAVAGIVTGVLVGVALV 167
A + S+ ATG+ + ++ PGL GA GI+ GVLVGVAL+
Sbjct: 654 -ACFVSNLATGRNNSIVKSITVSASGTSPGLSAGATVGIMIGVLVGVALI 702
>gi|52317156 carcinoembryonic antigen-related cell adhesion molecule
isoform 2 [Homo sapiens]
Length = 292
Score = 143 bits (360), Expect = 2e-34
Identities = 70/143 (48%), Positives = 91/143 (63%)
Query: 1 MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE 60
MGPPSA P PWQGLL+TASLLTFW+ PTT I + P AEG++V L + E
Sbjct: 1 MGPPSACPHRECIPWQGLLLTASLLTFWNAPTTAWLFIASAPFEVAEGENVHLSVVYLPE 60
Query: 61 TIQAYYWHKGKTAEGSPLIAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSY 120
+ +Y W+KGKT E + LIA Y+ D PG AYSGRET+ P+G L FQN+TLED G Y
Sbjct: 61 NLYSYGWYKGKTVEPNQLIAAYVIDTHVRTPGPAYSGRETISPSGDLHFQNVTLEDTGYY 120
Query: 121 TLRTINASYDSDQATGQLHVHQN 143
L+ + +QA+ L V+++
Sbjct: 121 NLQVTYRNSQIEQASHHLRVYES 143
Score = 84.7 bits (208), Expect = 7e-17
Identities = 52/103 (50%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 104 NGSLLFQNITLEDAGSYTLRTINASYDSDQATGQLHVHQNNVPGLPVGAVAGIVTGVLVG 163
N L I EDAG Y N + +L V +N GI+ GVLVG
Sbjct: 196 NHVLTIDPIRQEDAGEYQCEVSNPVSSNRSDPLKLTVKYDNT--------LGILIGVLVG 247
Query: 164 VALVAALVCFLLLSRTGRASIQRDLREQPPPASTPGHGPSHRS 206
LVAALVCFLLL +TGRAS Q D REQ PPASTPGHGPS S
Sbjct: 248 SLLVAALVCFLLLRKTGRASDQSDFREQQPPASTPGHGPSDSS 290
>gi|148612793 carcinoembryonic antigen-related cell adhesion
molecule isoform 1 [Homo sapiens]
Length = 293
Score = 143 bits (360), Expect = 2e-34
Identities = 70/143 (48%), Positives = 91/143 (63%)
Query: 1 MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE 60
MGPPSA P PWQGLL+TASLLTFW+ PTT I + P AEG++V L + E
Sbjct: 1 MGPPSACPHRECIPWQGLLLTASLLTFWNAPTTAWLFIASAPFEVAEGENVHLSVVYLPE 60
Query: 61 TIQAYYWHKGKTAEGSPLIAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSY 120
+ +Y W+KGKT E + LIA Y+ D PG AYSGRET+ P+G L FQN+TLED G Y
Sbjct: 61 NLYSYGWYKGKTVEPNQLIAAYVIDTHVRTPGPAYSGRETISPSGDLHFQNVTLEDTGYY 120
Query: 121 TLRTINASYDSDQATGQLHVHQN 143
L+ + +QA+ L V+++
Sbjct: 121 NLQVTYRNSQIEQASHHLRVYES 143
Score = 82.8 bits (203), Expect = 2e-16
Identities = 51/103 (49%), Positives = 57/103 (55%), Gaps = 7/103 (6%)
Query: 104 NGSLLFQNITLEDAGSYTLRTINASYDSDQATGQLHVHQNNVPGLPVGAVAGIVTGVLVG 163
N L I EDAG Y N + +L V ++ GI+ GVLVG
Sbjct: 196 NHVLTIDPIRQEDAGEYQCEVSNPVSSNRSDPLKLTVKSDD-------NTLGILIGVLVG 248
Query: 164 VALVAALVCFLLLSRTGRASIQRDLREQPPPASTPGHGPSHRS 206
LVAALVCFLLL +TGRAS Q D REQ PPASTPGHGPS S
Sbjct: 249 SLLVAALVCFLLLRKTGRASDQSDFREQQPPASTPGHGPSDSS 291
>gi|194097369 pregnancy specific beta-1-glycoprotein 5 [Homo
sapiens]
Length = 335
Score = 142 bits (357), Expect = 3e-34
Identities = 73/136 (53%), Positives = 87/136 (63%)
Query: 1 MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE 60
MGP SA P H W+GLL+TASLL FW+ P T Q TIEALP +EGKDVLLL N+ +
Sbjct: 1 MGPLSAPPCTQHITWKGLLLTASLLNFWNLPITAQVTIEALPPKVSEGKDVLLLVHNLPQ 60
Query: 61 TIQAYYWHKGKTAEGSPLIAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSY 120
+ Y W+KG+ + I Y+ D Q NI G AY+GRETVY N SLL QN+T EDAGSY
Sbjct: 61 NLAGYIWYKGQLMDLYHYITSYVVDGQINIYGPAYTGRETVYSNASLLIQNVTREDAGSY 120
Query: 121 TLRTINASYDSDQATG 136
TL I + TG
Sbjct: 121 TLHIIKRGDRTRGVTG 136
>gi|194097367 pregnancy specific beta-1-glycoprotein 5 [Homo
sapiens]
Length = 335
Score = 142 bits (357), Expect = 3e-34
Identities = 73/136 (53%), Positives = 87/136 (63%)
Query: 1 MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE 60
MGP SA P H W+GLL+TASLL FW+ P T Q TIEALP +EGKDVLLL N+ +
Sbjct: 1 MGPLSAPPCTQHITWKGLLLTASLLNFWNLPITAQVTIEALPPKVSEGKDVLLLVHNLPQ 60
Query: 61 TIQAYYWHKGKTAEGSPLIAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSY 120
+ Y W+KG+ + I Y+ D Q NI G AY+GRETVY N SLL QN+T EDAGSY
Sbjct: 61 NLAGYIWYKGQLMDLYHYITSYVVDGQINIYGPAYTGRETVYSNASLLIQNVTREDAGSY 120
Query: 121 TLRTINASYDSDQATG 136
TL I + TG
Sbjct: 121 TLHIIKRGDRTRGVTG 136
>gi|157805480 pregnancy specific beta-1-glycoprotein 7 precursor
[Homo sapiens]
Length = 419
Score = 140 bits (353), Expect = 1e-33
Identities = 72/137 (52%), Positives = 86/137 (62%)
Query: 1 MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE 60
MGP SA P H W+GLL+TASLL FW+PPTT Q TIEA P +EGKDVLLL N+ +
Sbjct: 1 MGPLSAPPCTQHITWKGLLLTASLLNFWNPPTTAQVTIEAQPPKVSEGKDVLLLVHNLPQ 60
Query: 61 TIQAYYWHKGKTAEGSPLIAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSY 120
+ Y W+KG+ + + YI D Q G AYSGRETVY N SLL QN+T ED GSY
Sbjct: 61 NLTGYIWYKGQIRDLYHYVTSYIVDGQIIKYGPAYSGRETVYSNASLLIQNVTQEDTGSY 120
Query: 121 TLRTINASYDSDQATGQ 137
TL I + TG+
Sbjct: 121 TLHIIKRGDGTGGVTGR 137
>gi|5901930 carcinoembryonic antigen-related cell adhesion molecule
7 [Homo sapiens]
Length = 265
Score = 140 bits (353), Expect = 1e-33
Identities = 69/141 (48%), Positives = 94/141 (66%), Gaps = 1/141 (0%)
Query: 1 MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE 60
MG PSA P PWQGLL+TASLLTFW+ P + Q I+ +P + AEGK+VLL+ N S+
Sbjct: 1 MGSPSACPYRVCIPWQGLLLTASLLTFWNLPNSAQTNIDVVPFNVAEGKEVLLVVHNESQ 60
Query: 61 TIQAYYWHKGKTAEGSPLIAGYITDI-QANIPGAAYSGRETVYPNGSLLFQNITLEDAGS 119
+ Y W+KG+ + I GY+ +I Q N PG A++GRET+YPNG+LL QN+T DAG
Sbjct: 61 NLYGYNWYKGERVHANYRIIGYVKNISQENAPGPAHNGRETIYPNGTLLIQNVTHNDAGF 120
Query: 120 YTLRTINASYDSDQATGQLHV 140
YTL I + +++ T Q +V
Sbjct: 121 YTLHVIKENLVNEEVTRQFYV 141
Score = 32.3 bits (72), Expect = 0.39
Identities = 38/162 (23%), Positives = 58/162 (35%), Gaps = 45/162 (27%)
Query: 20 ITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISETIQAY-YWHKGKTAEGSPL 78
+T F PP +I + + E KD+++L C Y +W ++ SP
Sbjct: 135 VTRQFYVFSEPPKP---SITSNNFNPVENKDIVVLTCQPETQNTTYLWWVNNQSLLVSPR 191
Query: 79 IAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSYTLR-------------TI 125
+ TD N +L+ + T D G Y T+
Sbjct: 192 LL-LSTD------------------NRTLVLLSATKNDIGPYECEIQNPVGASRSDPVTL 232
Query: 126 NASYDSDQATGQLHVHQNNVPGLPVGAVAGIVTGVLVGVALV 167
N Y+S QA+ P L G I+ GVL G+AL+
Sbjct: 233 NVRYESVQASS---------PDLSAGTAVSIMIGVLAGMALI 265
>gi|156616282 pregnancy specific beta-1-glycoprotein 2 [Homo
sapiens]
Length = 335
Score = 139 bits (349), Expect = 3e-33
Identities = 72/136 (52%), Positives = 85/136 (62%)
Query: 1 MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE 60
MGP SA P H W+GLL+TASLL FW+ PTT Q TIEA P +EGKDVLLL N+ +
Sbjct: 1 MGPLSAPPCTEHIKWKGLLVTASLLNFWNLPTTAQVTIEAQPPKVSEGKDVLLLVHNLPQ 60
Query: 61 TIQAYYWHKGKTAEGSPLIAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSY 120
+ Y W+KG+ + I Y+ D Q I G AYSGRET Y N SLL QN+T EDAGSY
Sbjct: 61 NLTGYIWYKGQIRDLYHYITSYVVDGQIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
Query: 121 TLRTINASYDSDQATG 136
TL I + TG
Sbjct: 121 TLHIIKRGDGTRGVTG 136
>gi|194328710 pregnancy specific beta-1-glycoprotein 8 isoform b
[Homo sapiens]
Length = 419
Score = 138 bits (347), Expect = 5e-33
Identities = 71/136 (52%), Positives = 87/136 (63%)
Query: 1 MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE 60
MG SA P W+GLL+TASLL FW+PPTT Q TIEA P+ +EGKDVLLL N+ +
Sbjct: 1 MGLLSAPPCTQRITWKGLLLTASLLNFWNPPTTAQVTIEAQPTKVSEGKDVLLLVHNLPQ 60
Query: 61 TIQAYYWHKGKTAEGSPLIAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSY 120
+ Y W+KG+ + I Y+ D Q I G AYSGRET+Y N SLL QN+T EDAGSY
Sbjct: 61 NLTGYIWYKGQIRDLYHYITSYVVDGQIIIYGPAYSGRETIYSNASLLIQNVTQEDAGSY 120
Query: 121 TLRTINASYDSDQATG 136
TL I ++ TG
Sbjct: 121 TLHIIMGGDENRGVTG 136
>gi|51510887 pregnancy specific beta-1-glycoprotein 8 isoform a
[Homo sapiens]
Length = 426
Score = 138 bits (347), Expect = 5e-33
Identities = 71/136 (52%), Positives = 87/136 (63%)
Query: 1 MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE 60
MG SA P W+GLL+TASLL FW+PPTT Q TIEA P+ +EGKDVLLL N+ +
Sbjct: 1 MGLLSAPPCTQRITWKGLLLTASLLNFWNPPTTAQVTIEAQPTKVSEGKDVLLLVHNLPQ 60
Query: 61 TIQAYYWHKGKTAEGSPLIAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSY 120
+ Y W+KG+ + I Y+ D Q I G AYSGRET+Y N SLL QN+T EDAGSY
Sbjct: 61 NLTGYIWYKGQIRDLYHYITSYVVDGQIIIYGPAYSGRETIYSNASLLIQNVTQEDAGSY 120
Query: 121 TLRTINASYDSDQATG 136
TL I ++ TG
Sbjct: 121 TLHIIMGGDENRGVTG 136
>gi|47419900 pregnancy specific beta-1-glycoprotein 4 isoform 2
[Homo sapiens]
Length = 326
Score = 136 bits (342), Expect = 2e-32
Identities = 71/136 (52%), Positives = 84/136 (61%)
Query: 1 MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE 60
MGP SA P W+G+L+TASLL FW+PPTT Q TIEA P +EGKDVLLL N+ +
Sbjct: 1 MGPLSAPPCTQRITWKGVLLTASLLNFWNPPTTAQVTIEAQPPKVSEGKDVLLLVHNLPQ 60
Query: 61 TIQAYYWHKGKTAEGSPLIAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSY 120
+ Y W+KG+ I Y+ D Q I G AYSGRE VY N SLL QN+T EDAGSY
Sbjct: 61 NLAGYIWYKGQMTYLYHYITSYVVDGQRIIYGPAYSGRERVYSNASLLIQNVTQEDAGSY 120
Query: 121 TLRTINASYDSDQATG 136
TL I + TG
Sbjct: 121 TLHIIKRRDGTGGVTG 136
>gi|42560235 pregnancy specific beta-1-glycoprotein 4 isoform 1
[Homo sapiens]
Length = 419
Score = 136 bits (342), Expect = 2e-32
Identities = 71/136 (52%), Positives = 84/136 (61%)
Query: 1 MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE 60
MGP SA P W+G+L+TASLL FW+PPTT Q TIEA P +EGKDVLLL N+ +
Sbjct: 1 MGPLSAPPCTQRITWKGVLLTASLLNFWNPPTTAQVTIEAQPPKVSEGKDVLLLVHNLPQ 60
Query: 61 TIQAYYWHKGKTAEGSPLIAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSY 120
+ Y W+KG+ I Y+ D Q I G AYSGRE VY N SLL QN+T EDAGSY
Sbjct: 61 NLAGYIWYKGQMTYLYHYITSYVVDGQRIIYGPAYSGRERVYSNASLLIQNVTQEDAGSY 120
Query: 121 TLRTINASYDSDQATG 136
TL I + TG
Sbjct: 121 TLHIIKRRDGTGGVTG 136
>gi|164663836 pregnancy specific beta-1-glycoprotein 11 isoform 1
[Homo sapiens]
Length = 335
Score = 135 bits (340), Expect = 3e-32
Identities = 71/136 (52%), Positives = 84/136 (61%)
Query: 1 MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE 60
MGP SA P H W+GLL+TA LL FW+ PTT Q IEA P +EGKDVLLL N+ +
Sbjct: 1 MGPLSAPPCTEHIKWKGLLLTALLLNFWNLPTTAQVMIEAQPPKVSEGKDVLLLVHNLPQ 60
Query: 61 TIQAYYWHKGKTAEGSPLIAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSY 120
+ Y W+KG+ + I Y+ D Q I G AYSGRETVY N SLL QN+T EDAGSY
Sbjct: 61 NLTGYIWYKGQIRDLYHYITSYVVDGQIIIYGPAYSGRETVYSNASLLIQNVTREDAGSY 120
Query: 121 TLRTINASYDSDQATG 136
TL I + TG
Sbjct: 121 TLHIIKRGDGTRGVTG 136
>gi|4506175 pregnancy specific beta-1-glycoprotein 6 isoform a [Homo
sapiens]
Length = 435
Score = 132 bits (333), Expect = 2e-31
Identities = 72/140 (51%), Positives = 85/140 (60%), Gaps = 1/140 (0%)
Query: 1 MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE 60
MGP SA P H W+GLL+TASLL FW+ PTT Q IEA P +EGKDVLLL N+ +
Sbjct: 1 MGPLSAPPCTQHITWKGLLLTASLLNFWNLPTTAQVIIEAKPPKVSEGKDVLLLVHNLPQ 60
Query: 61 TIQAYYWHKGKTAEGSPLIAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSY 120
+ Y W+KG+ + I Y+ Q I G AYSGRETVY N SLL QN+T EDAGSY
Sbjct: 61 NLTGYIWYKGQMTDLYHYITSYVVHGQI-IYGPAYSGRETVYSNASLLIQNVTQEDAGSY 119
Query: 121 TLRTINASYDSDQATGQLHV 140
TL I + TG V
Sbjct: 120 TLHIIKRGDGTGGVTGYFTV 139
>gi|73661174 pregnancy specific beta-1-glycoprotein 6 isoform b
[Homo sapiens]
Length = 424
Score = 132 bits (333), Expect = 2e-31
Identities = 72/140 (51%), Positives = 85/140 (60%), Gaps = 1/140 (0%)
Query: 1 MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE 60
MGP SA P H W+GLL+TASLL FW+ PTT Q IEA P +EGKDVLLL N+ +
Sbjct: 1 MGPLSAPPCTQHITWKGLLLTASLLNFWNLPTTAQVIIEAKPPKVSEGKDVLLLVHNLPQ 60
Query: 61 TIQAYYWHKGKTAEGSPLIAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSY 120
+ Y W+KG+ + I Y+ Q I G AYSGRETVY N SLL QN+T EDAGSY
Sbjct: 61 NLTGYIWYKGQMTDLYHYITSYVVHGQI-IYGPAYSGRETVYSNASLLIQNVTQEDAGSY 119
Query: 121 TLRTINASYDSDQATGQLHV 140
TL I + TG V
Sbjct: 120 TLHIIKRGDGTGGVTGYFTV 139
>gi|109240546 pregnancy specific beta-1-glycoprotein 3 [Homo
sapiens]
Length = 428
Score = 132 bits (333), Expect = 2e-31
Identities = 69/136 (50%), Positives = 85/136 (62%)
Query: 1 MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE 60
MGP SA P W+GLL+TA LL FW+ PTT Q TIEA P+ ++GKDVLLL N+ +
Sbjct: 1 MGPLSAPPCTQRITWKGLLLTALLLNFWNLPTTAQVTIEAEPTKVSKGKDVLLLVHNLPQ 60
Query: 61 TIQAYYWHKGKTAEGSPLIAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSY 120
+ Y W+KG+ + I Y+ D Q I G AYSGRETVY N SLL QN+T EDAGSY
Sbjct: 61 NLAGYIWYKGQMKDLYHYITSYVVDGQIIIYGPAYSGRETVYSNASLLIQNVTREDAGSY 120
Query: 121 TLRTINASYDSDQATG 136
TL + + TG
Sbjct: 121 TLHIVKRGDGTRGETG 136
>gi|21361392 pregnancy specific beta-1-glycoprotein 1 [Homo sapiens]
Length = 426
Score = 132 bits (332), Expect = 3e-31
Identities = 69/137 (50%), Positives = 85/137 (62%)
Query: 1 MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE 60
MG SA P W+GLL+TASLL FW+ PTT Q TIEA P+ +EGKDVLLL N+ +
Sbjct: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
Query: 61 TIQAYYWHKGKTAEGSPLIAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSY 120
+ Y W+KG+ + I Y+ D + I G AYSGRET Y N SLL QN+T EDAGSY
Sbjct: 61 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
Query: 121 TLRTINASYDSDQATGQ 137
TL I + TG+
Sbjct: 121 TLHIIKGDDGTRGVTGR 137
>gi|156616284 pregnancy specific beta-1-glycoprotein 9 [Homo
sapiens]
Length = 426
Score = 131 bits (329), Expect = 6e-31
Identities = 66/125 (52%), Positives = 82/125 (65%)
Query: 1 MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE 60
MGP A W+GLL+TASLL FW+PPTT + TIEA P +EGKDVLLL N+ +
Sbjct: 1 MGPLPAPSCTQRITWKGLLLTASLLNFWNPPTTAEVTIEAQPPKVSEGKDVLLLVHNLPQ 60
Query: 61 TIQAYYWHKGKTAEGSPLIAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSY 120
+ Y+W+KG+ + I YI D + I G AYSGRETVY N SLL QN+T +DAG+Y
Sbjct: 61 NLPGYFWYKGEMTDLYHYIISYIVDGKIIIYGPAYSGRETVYSNASLLIQNVTRKDAGTY 120
Query: 121 TLRTI 125
TL I
Sbjct: 121 TLHII 125
>gi|85861202 carcinoembryonic antigen-related cell adhesion molecule
16 [Homo sapiens]
Length = 484
Score = 76.3 bits (186), Expect = 2e-14
Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 5/125 (4%)
Query: 18 LLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISETIQAYYWHKGKTAEGSP 77
LL++A TF + + T+E P+ +EG +V L+ +S + AY W+ G T S
Sbjct: 68 LLLSA---TFLNVGAEISITLE--PAQPSEGDNVTLVVHGLSGELLAYSWYAGPTLSVSY 122
Query: 78 LIAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSYTLRTINASYDSDQATGQ 137
L+A YI PG A++GRE V P+GSL Q I +G+Y L+T N ++ G
Sbjct: 123 LVASYIVSTGDETPGPAHTGREAVRPDGSLDIQGILPRHSGTYILQTFNRQLQTEVGYGH 182
Query: 138 LHVHQ 142
+ VH+
Sbjct: 183 VQVHE 187
Score = 59.7 bits (143), Expect = 2e-09
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 38 IEALPSSAAEGKDVLLLACNISETIQAYYWHKGKTAEGSPLIAGYITDIQANIPGAAYSG 97
I +P+ EG+DV L + + Y W++G +E + L++ + I G A++G
Sbjct: 380 IVPVPTKPTEGQDVTLTVQGYPKDLLVYAWYRGPASEPNRLLSQLPSGTW--IAGPAHTG 437
Query: 98 RETVYPNGSLLFQNITLEDAGSYTLRTINASYDSDQATGQLHV 140
RE +PN SLL Q + L D G YTL+T+ ++ +L V
Sbjct: 438 REVGFPNCSLLVQKLNLTDTGRYTLKTVTVQGKTETLEVELQV 480
>gi|189217881 carcinoembryonic antigen-related cell adhesion
molecule 19 isoform 1 [Homo sapiens]
Length = 299
Score = 67.4 bits (163), Expect = 1e-11
Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 16 QGLLITASLLTFWH-PPTTVQFTIEALPSSAAEGKDVLLLACNISETIQAYYWHKGKTAE 74
+ LL++AS+L W + I+ +P + +D+LL + +T Q + W+ G+
Sbjct: 13 KSLLLSASILVLWMLQGSQAALYIQKIPEQPQKNQDLLLSVQGVPDTFQDFNWYLGEETY 72
Query: 75 GSPLIAGYITDIQ-ANIPGAAYSGRETV-YPNGSLLFQNITLEDAGSYTLR-TINASYDS 131
G + YI IQ G+A R+ V +PNGS+L + D+G+Y + TIN+ + +
Sbjct: 73 GGTRLFTYIPGIQRPQRDGSAMGQRDIVGFPNGSMLLRRAQPTDSGTYQVAITINSEW-T 131
Query: 132 DQATGQLHVHQNN--VPGLPVGAVAGIVTGVLVGV----ALVAALVCFLLLSRTGRASIQ 185
+A ++ V + N +P + AGI+ ++G AL+ + + +LL++R R
Sbjct: 132 MKAKTEVQVAEKNKELPSTHLPTNAGILAATIIGSLAAGALLISCIAYLLVTRNWRGQSH 191
Query: 186 R 186
R
Sbjct: 192 R 192
>gi|45267817 carcinoembryonic antigen-related cell adhesion molecule
19 isoform 2 [Homo sapiens]
Length = 300
Score = 67.4 bits (163), Expect = 1e-11
Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 16 QGLLITASLLTFWH-PPTTVQFTIEALPSSAAEGKDVLLLACNISETIQAYYWHKGKTAE 74
+ LL++AS+L W + I+ +P + +D+LL + +T Q + W+ G+
Sbjct: 13 KSLLLSASILVLWMLQGSQAALYIQKIPEQPQKNQDLLLSVQGVPDTFQDFNWYLGEETY 72
Query: 75 GSPLIAGYITDIQ-ANIPGAAYSGRETV-YPNGSLLFQNITLEDAGSYTLR-TINASYDS 131
G + YI IQ G+A R+ V +PNGS+L + D+G+Y + TIN+ + +
Sbjct: 73 GGTRLFTYIPGIQRPQRDGSAMGQRDIVGFPNGSMLLRRAQPTDSGTYQVAITINSEW-T 131
Query: 132 DQATGQLHVHQNN--VPGLPVGAVAGIVTGVLVGV----ALVAALVCFLLLSRTGRASIQ 185
+A ++ V + N +P + AGI+ ++G AL+ + + +LL++R R
Sbjct: 132 MKAKTEVQVAEKNKELPSTHLPTNAGILAATIIGSLAAGALLISCIAYLLVTRNWRGQSH 191
Query: 186 R 186
R
Sbjct: 192 R 192
>gi|122937205 carcinoembryonic antigen-related cell adhesion
molecule 18 [Homo sapiens]
Length = 398
Score = 53.9 bits (128), Expect = 1e-07
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 4/126 (3%)
Query: 15 WQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISETIQAYYWHKGKTAE 74
W+ + + ASLL + Q I + +G ++ + E +Q Y W+ G
Sbjct: 72 WRRVFLMASLLACGICQASGQIFITQ--TLGIKGYRTVVALDKVPEDVQEYSWYWGANDS 129
Query: 75 GSPLIAGYITDIQANIPGAAYSGRETVYPNGSLLFQNITLEDAGSYTLRTINASYDSDQA 134
+I + A PG Y+GRE V GSLL + L D G+YT+R + A ++ +A
Sbjct: 130 AGNMIISHKPP-SAQQPGPMYTGRERVNREGSLLIRPTALNDTGNYTVRVV-AGNETQRA 187
Query: 135 TGQLHV 140
TG L V
Sbjct: 188 TGWLEV 193
>gi|156564390 carcinoembryonic antigen-related cell adhesion
molecule 20 4L [Homo sapiens]
Length = 503
Score = 47.8 bits (112), Expect = 9e-06
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 1 MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE 60
MGP A GH W G+L++ASL T W PP Q T+ A P A + +DV+L
Sbjct: 1 MGP---ADSWGHH-WMGILLSASLCTVWSPPAAAQLTLNANPLDATQSEDVVLPVFGTPR 56
Query: 61 TIQAY 65
T Q +
Sbjct: 57 TPQIH 61
Score = 38.9 bits (89), Expect = 0.004
Identities = 34/133 (25%), Positives = 51/133 (38%), Gaps = 17/133 (12%)
Query: 104 NGSLLFQNITLEDAGSYTLRTINASYDSDQATGQLHVHQNNVPGLPVGAVAGIVTGVLVG 163
N +L+ + D G Y N + +L ++ L GA+AGIV G+L
Sbjct: 306 NRTLIIHGLQRNDTGPYACEVWNWGSRARSEPLELTINCPQSSSLSSGAIAGIVIGILAV 365
Query: 164 VALVAALVCFLLLSRTGRASIQRDLREQPPPASTPGHGPSHRSTFSAPLPSPRTATPIYE 223
+A+ + L FL + R P+ PSH + S P+P T
Sbjct: 366 IAVASELGYFLYIRNARR------------PSRKTTEDPSHET--SQPIPKEEHPTEPSS 411
Query: 224 ELLYSDANIYCQI 236
E L + YC I
Sbjct: 412 ESLSPE---YCNI 421
>gi|156564378 carcinoembryonic antigen-related cell adhesion
molecule 20 5L [Homo sapiens]
Length = 596
Score = 47.8 bits (112), Expect = 9e-06
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 1 MGPPSAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALPSSAAEGKDVLLLACNISE 60
MGP A GH W G+L++ASL T W PP Q T+ A P A + +DV+L
Sbjct: 1 MGP---ADSWGHH-WMGILLSASLCTVWSPPAAAQLTLNANPLDATQSEDVVLPVFGTPR 56
Query: 61 TIQAY 65
T Q +
Sbjct: 57 TPQIH 61
Score = 35.4 bits (80), Expect = 0.046
Identities = 36/131 (27%), Positives = 52/131 (39%), Gaps = 18/131 (13%)
Query: 107 LLFQNITLEDAGSYTLRTINASYDSDQATGQL-HVHQNNVPGLPVGAVAGIVTGVLVGVA 165
L+ + +T E G Y N+ ++T L V L GA+AGIV G+L +A
Sbjct: 401 LIIRALTWEHDGIYNCTASNSLTGLARSTSVLVKVVGPQSSSLSSGAIAGIVIGILAVIA 460
Query: 166 LVAALVCFLLLSRTGRASIQRDLREQPPPASTPGHGPSHRSTFSAPLPSPRTATPIYEEL 225
+ + L FL + R P+ PSH + S P+P T E
Sbjct: 461 VASELGYFLYIRNARR------------PSRKTTEDPSHET--SQPIPKEEHPTEPSSES 506
Query: 226 LYSDANIYCQI 236
L + YC I
Sbjct: 507 LSPE---YCNI 514
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,905,005
Number of Sequences: 37866
Number of extensions: 526043
Number of successful extensions: 3071
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 80
Number of HSP's that attempted gapping in prelim test: 2752
Number of HSP's gapped (non-prelim): 380
length of query: 244
length of database: 18,247,518
effective HSP length: 99
effective length of query: 145
effective length of database: 14,498,784
effective search space: 2102323680
effective search space used: 2102323680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.