MATN4 3534

Name: MATN4	Sequence: fasta or formatted (499aa)		NCBI GI: 13699836
Description: matrilin 4 isoform 3 precursor		Referenced in: Extracellular Matrix
Other entries for this name: alt prot [581aa] matrilin 4 isoform 1 precursor alt prot [540aa] matrilin 4 isoform 2 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.4 42 2 C cysteine 2.6 13 1 D aspartate 4.2 21 2 E glutamate 8.4 42 2 F phenylalanine 4.2 21 1 G glycine 8.0 40 1 H histidine 1.6 8 1 I isoleucine 2.8 14 1 K lysine 1.4 7 1 L leucine 11.4 57 5 M methionine 2.4 12 1 N asparagine 2.4 12 1 P proline 4.8 24 2 Q glutamine 5.6 28 1 R arginine 9.0 45 2 S serine 6.2 31 2 T threonine 4.0 20 1 V valine 10.2 51 1 W tryptophan 0.6 3 1 Y tyrosine 1.6 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 matrilin 4 isoform 3 precursor MATN4 0.979 matrilin 4 isoform 2 precursor MATN4 0.915 matrilin 4 isoform 1 precursor MATN1 0.452 matrilin 1, cartilage matrix protein MATN2 0.261 matrilin 2 isoform b precursor MATN2 0.252 matrilin 2 isoform a precursor MATN3 0.215 matrilin 3 precursor COL6A6 0.157 collagen type VI alpha 6 COL29A1 0.153 collagen, type XXIX, alpha 1 VIT 0.149 vitrin COL6A3 0.143 alpha 3 type VI collagen isoform 1 precursor COL22A1 0.129 collagen, type XXII, alpha 1 COL6A3 0.127 alpha 3 type VI collagen isoform 5 precursor COL6A3 0.127 alpha 3 type VI collagen isoform 4 precursor COCH 0.125 cochlin precursor COCH 0.125 cochlin precursor COL6A3 0.123 alpha 3 type VI collagen isoform 2 precursor COL12A1 0.113 collagen, type XII, alpha 1 short isoform precursor ... COL14A1 0.113 collagen, type XIV, alpha 1 COL6A3 0.111 alpha 3 type VI collagen isoform 3 precursor VWA2 0.111 von Willebrand factor A domain containing 2 COL12A1 0.110 collagen, type XII, alpha 1 long isoform precursor [... COL21A1 0.108 collagen, type XXI, alpha 1 precursor COL20A1 0.097 collagen, type XX, alpha 1 COL7A1 0.086 alpha 1 type VII collagen precursor VWF 0.085 von Willebrand factor preproprotein VWA1 0.080 von Willebrand factor A domain containing 1 isoform ... COL28A1 0.077 collagen, type XXVIII precursor COL6A1 0.072 collagen, type VI, alpha 1 precursor ITGAX 0.065 integrin alpha X precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.