MATN4 3533

Name: MATN4	Sequence: fasta or formatted (540aa)		NCBI GI: 13699834
Description: matrilin 4 isoform 2 precursor		Referenced in: Extracellular Matrix
Other entries for this name: alt prot [581aa] matrilin 4 isoform 1 precursor alt prot [499aa] matrilin 4 isoform 3 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 43 2 C cysteine 3.5 19 1 D aspartate 4.4 24 2 E glutamate 8.1 44 2 F phenylalanine 4.1 22 1 G glycine 8.3 45 2 H histidine 2.2 12 1 I isoleucine 2.8 15 1 K lysine 1.3 7 1 L leucine 10.7 58 5 M methionine 2.2 12 1 N asparagine 2.4 13 1 P proline 5.0 27 2 Q glutamine 5.7 31 1 R arginine 8.9 48 2 S serine 6.5 35 2 T threonine 3.9 21 1 V valine 9.6 52 1 W tryptophan 0.6 3 1 Y tyrosine 1.7 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 matrilin 4 isoform 2 precursor MATN4 0.981 matrilin 4 isoform 1 precursor MATN4 0.890 matrilin 4 isoform 3 precursor MATN1 0.397 matrilin 1, cartilage matrix protein MATN2 0.268 matrilin 2 isoform b precursor MATN2 0.259 matrilin 2 isoform a precursor MATN3 0.234 matrilin 3 precursor COL12A1 0.177 collagen, type XII, alpha 1 long isoform precursor [... VWA2 0.135 von Willebrand factor A domain containing 2 COL22A1 0.117 collagen, type XXII, alpha 1 COL6A3 0.106 alpha 3 type VI collagen isoform 5 precursor COL6A3 0.106 alpha 3 type VI collagen isoform 1 precursor COL6A3 0.106 alpha 3 type VI collagen isoform 4 precursor COL12A1 0.103 collagen, type XII, alpha 1 short isoform precursor ... COL14A1 0.103 collagen, type XIV, alpha 1 COL21A1 0.098 collagen, type XXI, alpha 1 precursor COL29A1 0.088 collagen, type XXIX, alpha 1 COL20A1 0.088 collagen, type XX, alpha 1 VIT 0.080 vitrin COL6A6 0.079 collagen type VI alpha 6 COL7A1 0.078 alpha 1 type VII collagen precursor COCH 0.074 cochlin precursor COCH 0.074 cochlin precursor VWA1 0.073 von Willebrand factor A domain containing 1 isoform ... COL28A1 0.070 collagen, type XXVIII precursor COL6A3 0.067 alpha 3 type VI collagen isoform 2 precursor COL6A3 0.067 alpha 3 type VI collagen isoform 3 precursor VWF 0.065 von Willebrand factor preproprotein ITGAX 0.059 integrin alpha X precursor ITGA1 0.057 integrin, alpha 1 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.