ITGA1 25672

Name: ITGA1	Sequence: fasta or formatted (1179aa)		NCBI GI: 31657142
Description: integrin, alpha 1 precursor		Referenced in: Collagen Integrins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.1 60 2 C cysteine 2.3 27 2 D aspartate 5.1 60 2 E glutamate 6.2 73 2 F phenylalanine 4.2 50 2 G glycine 6.9 81 2 H histidine 1.9 22 1 I isoleucine 6.7 79 3 K lysine 6.1 72 3 L leucine 8.1 96 4 M methionine 2.2 26 1 N asparagine 6.0 71 1 P proline 4.0 47 2 Q glutamine 3.6 42 2 R arginine 3.9 46 2 S serine 8.6 101 3 T threonine 7.3 86 3 V valine 7.6 90 2 W tryptophan 0.8 9 1 Y tyrosine 3.5 41 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 integrin, alpha 1 precursor ITGA2 0.348 integrin alpha 2 precursor ITGA11 0.339 integrin, alpha 11 precursor ITGA10 0.295 integrin, alpha 10 precursor ITGAM 0.159 integrin alpha M isoform 2 precursor ITGAM 0.158 integrin alpha M isoform 1 precursor ITGAL 0.154 integrin alpha L isoform a precursor ITGAX 0.149 integrin alpha X precursor ITGAD 0.145 integrin, alpha D precursor ITGAL 0.129 integrin alpha L isoform b precursor ITGAE 0.114 integrin, alpha E precursor ITGA9 0.094 integrin, alpha 9 precursor ITGA4 0.089 integrin alpha 4 precursor ITGA3 0.089 integrin alpha 3 isoform a precursor ITGA3 0.088 integrin alpha 3 isoform b precursor ITGA7 0.086 integrin alpha 7 isoform 3 ITGA7 0.086 integrin alpha 7 isoform 1 precursor ITGA7 0.085 integrin alpha 7 isoform 2 precursor ITGA6 0.082 integrin alpha chain, alpha 6 isoform b precursor [... ITGA6 0.082 integrin alpha chain, alpha 6 isoform a precursor [... ITGAV 0.079 integrin alpha-V isoform 2 ITGAV 0.079 integrin alpha-V isoform 1 precursor ITGA5 0.077 integrin alpha 5 precursor ITGAV 0.072 integrin alpha-V isoform 3 precursor ITGA8 0.071 integrin, alpha 8 ITGA2B 0.069 integrin alpha 2b preproprotein COL12A1 0.036 collagen, type XII, alpha 1 long isoform precursor [... COL14A1 0.031 collagen, type XIV, alpha 1 MATN2 0.029 matrilin 2 isoform b precursor MATN2 0.029 matrilin 2 isoform a precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.