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Search of human proteins with 62739183
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|62739183 C1q and tumor necrosis factor related protein 3
isoform b [Homo sapiens]
(319 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|62739183 C1q and tumor necrosis factor related protein 3 isof... 677 0.0
gi|13569919 C1q and tumor necrosis factor related protein 3 isof... 469 e-132
gi|5729785 complement component 1, q subcomponent-like 1 [Homo s... 111 1e-24
gi|94818738 C1q and tumor necrosis factor related protein 2 [Hom... 110 1e-24
gi|58801559 complement component 1, q subcomponent-like 3 [Homo ... 109 3e-24
gi|154937344 complement component 1, q subcomponent-like 2 [Homo... 109 4e-24
gi|4757760 adiponectin precursor [Homo sapiens] 108 5e-24
gi|13994280 C1q and tumor necrosis factor related protein 7 isof... 107 1e-23
gi|206597454 C1q and tumor necrosis factor related protein 7 iso... 107 1e-23
gi|206597452 C1q and tumor necrosis factor related protein 7 iso... 107 1e-23
gi|56606142 complement component 1, q subcomponent-like 4 [Homo ... 107 1e-23
gi|65301115 C1q and tumor necrosis factor related protein 9 [Hom... 106 3e-23
gi|50428933 C1q domain containing 1 isoform 1 [Homo sapiens] 105 4e-23
gi|50428931 C1q domain containing 1 isoform 3 [Homo sapiens] 105 4e-23
gi|23503235 C1q domain containing 1 isoform 2 [Homo sapiens] 105 4e-23
gi|56847616 C1q and tumor necrosis factor related protein 9B [Ho... 103 2e-22
gi|14149712 C1q and tumor necrosis factor related protein 5 prec... 100 2e-21
gi|32967300 C1q and tumor necrosis factor related protein 6 [Hom... 98 9e-21
gi|32967294 C1q and tumor necrosis factor related protein 6 [Hom... 98 9e-21
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] 97 1e-20
gi|56786155 complement component 1, q subcomponent, C chain prec... 94 2e-19
gi|166235903 complement component 1, q subcomponent, C chain pre... 94 2e-19
gi|87298828 complement component 1, q subcomponent, B chain prec... 92 5e-19
gi|122937273 hypothetical protein LOC131149 [Homo sapiens] 92 8e-19
gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens] 91 1e-18
gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens] 91 1e-18
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] 88 9e-18
gi|7705753 complement component 1, q subcomponent, A chain precu... 85 1e-16
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 80 2e-15
gi|5901944 elastin microfibril interfacer 1 [Homo sapiens] 79 7e-15
>gi|62739183 C1q and tumor necrosis factor related protein 3 isoform
b [Homo sapiens]
Length = 319
Score = 677 bits (1747), Expect = 0.0
Identities = 319/319 (100%), Positives = 319/319 (100%)
Query: 1 MLWRQLIYWQLLALFFLPFCLCQDEYMEVSGRTNKVVARIVQSHQQTGRSGSRREKVRER 60
MLWRQLIYWQLLALFFLPFCLCQDEYMEVSGRTNKVVARIVQSHQQTGRSGSRREKVRER
Sbjct: 1 MLWRQLIYWQLLALFFLPFCLCQDEYMEVSGRTNKVVARIVQSHQQTGRSGSRREKVRER 60
Query: 61 SHPKTGTVDNNTSTDLKSLRPDELPHPEVDDLAQITTFWGQSPQTGGLPPDCSKCCHGDY 120
SHPKTGTVDNNTSTDLKSLRPDELPHPEVDDLAQITTFWGQSPQTGGLPPDCSKCCHGDY
Sbjct: 61 SHPKTGTVDNNTSTDLKSLRPDELPHPEVDDLAQITTFWGQSPQTGGLPPDCSKCCHGDY 120
Query: 121 SFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEK 180
SFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEK
Sbjct: 121 SFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEK 180
Query: 181 GYPGIPPELQIAFMASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTF 240
GYPGIPPELQIAFMASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTF
Sbjct: 181 GYPGIPPELQIAFMASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTF 240
Query: 241 SMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMGNGAL 300
SMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMGNGAL
Sbjct: 241 SMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMGNGAL 300
Query: 301 HGDHQRFSTFAGFLLFETK 319
HGDHQRFSTFAGFLLFETK
Sbjct: 301 HGDHQRFSTFAGFLLFETK 319
>gi|13569919 C1q and tumor necrosis factor related protein 3 isoform
a [Homo sapiens]
Length = 246
Score = 469 bits (1208), Expect = e-132
Identities = 218/219 (99%), Positives = 219/219 (100%)
Query: 101 QSPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKG 160
+SPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKG
Sbjct: 28 ESPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKG 87
Query: 161 DKGDLGPRGERGQHGPKGEKGYPGIPPELQIAFMASLATHFSNQNSGIIFSSVETNIGNF 220
DKGDLGPRGERGQHGPKGEKGYPGIPPELQIAFMASLATHFSNQNSGIIFSSVETNIGNF
Sbjct: 88 DKGDLGPRGERGQHGPKGEKGYPGIPPELQIAFMASLATHFSNQNSGIIFSSVETNIGNF 147
Query: 221 FDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNH 280
FDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNH
Sbjct: 148 FDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNH 207
Query: 281 AVLKLAKGDEVWLRMGNGALHGDHQRFSTFAGFLLFETK 319
AVLKLAKGDEVWLRMGNGALHGDHQRFSTFAGFLLFETK
Sbjct: 208 AVLKLAKGDEVWLRMGNGALHGDHQRFSTFAGFLLFETK 246
>gi|5729785 complement component 1, q subcomponent-like 1 [Homo
sapiens]
Length = 258
Score = 111 bits (277), Expect = 1e-24
Identities = 76/222 (34%), Positives = 108/222 (48%), Gaps = 25/222 (11%)
Query: 102 SPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGD 161
S Q+G PP S G G G PGPPGPPG P G G G GEKG+
Sbjct: 53 SEQSGAPPP--STLVQGPQGKPGRTGKPGPPGPPGDP---------GPPGPVGPPGEKGE 101
Query: 162 KGDLGPRG--ERGQHGPKGEKGYPGIPPELQIAFMASLATHFSNQNSG---IIFSSVETN 216
G GP G G G Y +P ++AF A L N + G + F V TN
Sbjct: 102 PGKPGPPGLPGAGGSGAISTATYTTVP---RVAFYAGL----KNPHEGYEVLKFDDVVTN 154
Query: 217 IGNFFDVMTGRFGAPVSGVYFFTFS-MMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSD 275
+GN +D +G+F + G YFFT+ +M+ D ++ L NG S + + D
Sbjct: 155 LGNNYDAASGKFTCNIPGTYFFTYHVLMRGGDGTSMWADLCKNGQVRASAIAQDADQNYD 214
Query: 276 TSSNHAVLKLAKGDEVWLRMGNGALH-GDHQRFSTFAGFLLF 316
+SN +L L GDEV++++ G H G+ ++STF+GF+++
Sbjct: 215 YASNSVILHLDAGDEVFIKLDGGKAHGGNSNKYSTFSGFIIY 256
>gi|94818738 C1q and tumor necrosis factor related protein 2 [Homo
sapiens]
Length = 330
Score = 110 bits (276), Expect = 1e-24
Identities = 66/205 (32%), Positives = 98/205 (47%), Gaps = 14/205 (6%)
Query: 123 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 182
RG G GPPG G G G G GA G G +G KG G G G G+ GPKG+KG
Sbjct: 120 RGDSGEEGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGE 179
Query: 183 PGIP-------PELQIAFMASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGV 235
PG+P + AF ++ + + I F + N G ++ +G+F V G+
Sbjct: 180 PGLPGPCSCGSGHTKSAFSVAVTKSYPRERLPIKFDKILMNEGGHYNASSGKFVCGVPGI 239
Query: 236 YFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRM 295
Y+FT+ + + + + L+HNG + G D +S +L L +GDEVWL++
Sbjct: 240 YYFTYDITLAN--KHLAIGLVHNGQYRIRTFDAN-TGNHDVASGSTILALKQGDEVWLQI 296
Query: 296 ----GNGALHGDHQRFSTFAGFLLF 316
NG + + S F GFL++
Sbjct: 297 FYSEQNGLFYDPYWTDSLFTGFLIY 321
>gi|58801559 complement component 1, q subcomponent-like 3 [Homo
sapiens]
Length = 255
Score = 109 bits (273), Expect = 3e-24
Identities = 68/199 (34%), Positives = 100/199 (50%), Gaps = 17/199 (8%)
Query: 134 PPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYPGIPPELQIAF 193
P I G G G G G G GE G G +GP GE+G+ G +G G PG P L A
Sbjct: 56 PTFIQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPG-APGLNAAG 114
Query: 194 MASLATH-----------FSNQNSG---IIFSSVETNIGNFFDVMTGRFGAPVSGVYFFT 239
S AT+ Q+ G + F V TN+GN +D TG+F + G+YFFT
Sbjct: 115 AISAATYSTVPKIAFYAGLKRQHEGYEVLKFDDVVTNLGNHYDPTTGKFTCSIPGIYFFT 174
Query: 240 FS-MMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMGNG 298
+ +M+ D ++ L N S + + D +SN VL L GDEV++++ G
Sbjct: 175 YHVLMRGGDGTSMWADLCKNNQVRASAIAQDADQNYDYASNSVVLHLEPGDEVYIKLDGG 234
Query: 299 ALH-GDHQRFSTFAGFLLF 316
H G++ ++STF+GF+++
Sbjct: 235 KAHGGNNNKYSTFSGFIIY 253
>gi|154937344 complement component 1, q subcomponent-like 2 [Homo
sapiens]
Length = 287
Score = 109 bits (272), Expect = 4e-24
Identities = 71/211 (33%), Positives = 101/211 (47%), Gaps = 20/211 (9%)
Query: 126 QGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY--- 182
QGP G PG PG PG G G G G G GEKGD G G G + G G
Sbjct: 75 QGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVGG 134
Query: 183 -PGIPPELQIAFMASLATHFSNQNSG--------------IIFSSVETNIGNFFDVMTGR 227
G+ + + ++L+ FS + F V TN+GN +D TG+
Sbjct: 135 GAGVGGDSEGEVTSALSATFSGPKIAFYVGLKSPHEGYEVLKFDDVVTNLGNHYDPTTGK 194
Query: 228 FGAPVSGVYFFTFS-MMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLA 286
F V G+YFFT+ +M+ D ++ L NG S + + D +SN VL L
Sbjct: 195 FSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVVLHLD 254
Query: 287 KGDEVWLRMGNGALH-GDHQRFSTFAGFLLF 316
GDEV++++ G H G++ ++STF+GFLL+
Sbjct: 255 SGDEVYVKLDGGKAHGGNNNKYSTFSGFLLY 285
>gi|4757760 adiponectin precursor [Homo sapiens]
Length = 244
Score = 108 bits (271), Expect = 5e-24
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 19/201 (9%)
Query: 133 GPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPR---GERGQHGPKGEKGYPGI---- 185
G PG PG++G G +G G G KGEKGD G +GP+ GE G G +G +G+PGI
Sbjct: 42 GIPGHPGHNGAPGRDGRDGTPGEKGEKGDPGLIGPKGDIGETGVPGAEGPRGFPGIQGRK 101
Query: 186 --PPE----LQIAFMASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFT 239
P E + AF L T+ + N I F+ + N N +D TG+F + G+Y+F
Sbjct: 102 GEPGEGAYVYRSAFSVGLETYVTIPNMPIRFTKIFYNQQNHYDGSTGKFHCNIPGLYYFA 161
Query: 240 FSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRM-GNG 298
+ + + +++V V L + Y + D +S +L L GD+VWL++ G G
Sbjct: 162 YHITVY--MKDVKVSLFKKDKAMLFTYDQYQENNVDQASGSVLLHLEVGDQVWLQVYGEG 219
Query: 299 ---ALHGDHQRFSTFAGFLLF 316
L+ D+ STF GFLL+
Sbjct: 220 ERNGLYADNDNDSTFTGFLLY 240
>gi|13994280 C1q and tumor necrosis factor related protein 7 isoform
b [Homo sapiens]
Length = 289
Score = 107 bits (268), Expect = 1e-23
Identities = 77/243 (31%), Positives = 107/243 (44%), Gaps = 50/243 (20%)
Query: 121 SFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEK--------------------- 159
S G GPPGPPG G PG HG G G G +G KGEK
Sbjct: 35 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 94
Query: 160 GD------KGDLGPRGERGQHGP---------KGEKGYPGIPP-------ELQIAFMASL 197
GD KG +GP GE+G+ GP +GE+G PG+P L+ AF +
Sbjct: 95 GDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGI 154
Query: 198 ATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMH 257
T + + IIF+ V N G ++ TG+F G+Y+F++ + + + + L+H
Sbjct: 155 TTSYPEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLAN--KHLAIGLVH 212
Query: 258 NGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRM----GNGALHGDHQRFSTFAGF 313
NG + G D +S V+ L DEVWL + NG S F+GF
Sbjct: 213 NGQYRIKTFDAN-TGNHDVASGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGF 271
Query: 314 LLF 316
LL+
Sbjct: 272 LLY 274
>gi|206597454 C1q and tumor necrosis factor related protein 7
isoform b [Homo sapiens]
Length = 289
Score = 107 bits (268), Expect = 1e-23
Identities = 77/243 (31%), Positives = 107/243 (44%), Gaps = 50/243 (20%)
Query: 121 SFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEK--------------------- 159
S G GPPGPPG G PG HG G G G +G KGEK
Sbjct: 35 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 94
Query: 160 GD------KGDLGPRGERGQHGP---------KGEKGYPGIPP-------ELQIAFMASL 197
GD KG +GP GE+G+ GP +GE+G PG+P L+ AF +
Sbjct: 95 GDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGI 154
Query: 198 ATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMH 257
T + + IIF+ V N G ++ TG+F G+Y+F++ + + + + L+H
Sbjct: 155 TTSYPEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLAN--KHLAIGLVH 212
Query: 258 NGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRM----GNGALHGDHQRFSTFAGF 313
NG + G D +S V+ L DEVWL + NG S F+GF
Sbjct: 213 NGQYRIKTFDAN-TGNHDVASGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGF 271
Query: 314 LLF 316
LL+
Sbjct: 272 LLY 274
>gi|206597452 C1q and tumor necrosis factor related protein 7
isoform a [Homo sapiens]
Length = 296
Score = 107 bits (268), Expect = 1e-23
Identities = 77/243 (31%), Positives = 107/243 (44%), Gaps = 50/243 (20%)
Query: 121 SFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEK--------------------- 159
S G GPPGPPG G PG HG G G G +G KGEK
Sbjct: 42 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
Query: 160 GD------KGDLGPRGERGQHGP---------KGEKGYPGIPP-------ELQIAFMASL 197
GD KG +GP GE+G+ GP +GE+G PG+P L+ AF +
Sbjct: 102 GDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGI 161
Query: 198 ATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMH 257
T + + IIF+ V N G ++ TG+F G+Y+F++ + + + + L+H
Sbjct: 162 TTSYPEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLAN--KHLAIGLVH 219
Query: 258 NGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRM----GNGALHGDHQRFSTFAGF 313
NG + G D +S V+ L DEVWL + NG S F+GF
Sbjct: 220 NGQYRIKTFDAN-TGNHDVASGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGF 278
Query: 314 LLF 316
LL+
Sbjct: 279 LLY 281
>gi|56606142 complement component 1, q subcomponent-like 4 [Homo
sapiens]
Length = 238
Score = 107 bits (267), Expect = 1e-23
Identities = 68/201 (33%), Positives = 100/201 (49%), Gaps = 16/201 (7%)
Query: 127 GPPG-----PPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKG 181
GP G PP PPG G G G G G G G +G G+ G G G GP G
Sbjct: 41 GPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPGP----G 96
Query: 182 YPGIPPEL----QIAFMASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYF 237
G+ P +IAF A L + F V TN+GN ++ +G+F P+ GVYF
Sbjct: 97 PGGVAPAAGYVPRIAFYAGLRRPHEGYEV-LRFDDVVTNVGNAYEAASGKFTCPMPGVYF 155
Query: 238 FTFS-MMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMG 296
F + +M+ D ++ LM NG S + + D +SN +L L GDEV++++
Sbjct: 156 FAYHVLMRGGDGTSMWADLMKNGQVRASAIAQDADQNYDYASNSVILHLDVGDEVFIKLD 215
Query: 297 NGALHGDH-QRFSTFAGFLLF 316
G +HG + ++STF+GF+++
Sbjct: 216 GGKVHGGNTNKYSTFSGFIIY 236
>gi|65301115 C1q and tumor necrosis factor related protein 9 [Homo
sapiens]
Length = 333
Score = 106 bits (264), Expect = 3e-23
Identities = 73/226 (32%), Positives = 104/226 (46%), Gaps = 10/226 (4%)
Query: 100 GQSPQTGGLPPDCSKCCHGDYSFRGYQGPPG---PPGPPGIPGNHGNNGNNGATGHEGAK 156
G+ G P K GD G +GP G P GP G+PG G G G G G
Sbjct: 110 GEKGLRGETGPQGQKGNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPT 169
Query: 157 GEKGDKGDLGPRGERGQHGPKGEKGYPGIPPELQIAFMASLATHFSNQNSGIIFSSVETN 216
G +G+ G G RG +G G KG+ G + P+ ++ + F + + I F + N
Sbjct: 170 GPQGEPGVRGIRGWKGDRGEKGKIGETLVLPKSAFTVGLTVLSKFPSSDMPIKFDKILYN 229
Query: 217 IGNFFDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDT 276
N +D G+F ++GVY+FT+ + V V L+ NG + M + D
Sbjct: 230 EFNHYDTAAGKFTCHIAGVYYFTYHITVFS--RNVQVSLVKNGVKILHTKDAYMSSE-DQ 286
Query: 277 SSNHAVLKLAKGDEVWLRMGNG----ALHGDHQRFSTFAGFLLFET 318
+S VL+L GDEVWL++ G L D +TF GFLLF +
Sbjct: 287 ASGGIVLQLKLGDEVWLQVTGGERFNGLFADEDDDTTFTGFLLFSS 332
Score = 62.8 bits (151), Expect = 4e-10
Identities = 30/62 (48%), Positives = 35/62 (56%)
Query: 123 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 182
+G +G G PG PG PG G +G G G +G KG KGD G RG G+HGPKG G
Sbjct: 49 KGDKGDAGEPGRPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGP 108
Query: 183 PG 184
G
Sbjct: 109 MG 110
Score = 62.0 bits (149), Expect = 7e-10
Identities = 29/52 (55%), Positives = 34/52 (65%)
Query: 133 GPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYPG 184
G PGIPGN G+NG G G +GAKG+KGD G+ G G G+ G GEKG G
Sbjct: 26 GHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPGKDGTSGEKGERG 77
>gi|50428933 C1q domain containing 1 isoform 1 [Homo sapiens]
Length = 1127
Score = 105 bits (263), Expect = 4e-23
Identities = 51/138 (36%), Positives = 87/138 (63%), Gaps = 3/138 (2%)
Query: 182 YPGIPPELQIAFMASLATHFS--NQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFT 239
YP +P ++++AF A+ ++ + + I+F + N+G FD+ GRF PV+G Y F
Sbjct: 990 YP-LPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFI 1048
Query: 240 FSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMGNGA 299
F M+K +YV LM N + S Y+ + +T+SNHA+L+L +GD++WLR+ GA
Sbjct: 1049 FHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGA 1108
Query: 300 LHGDHQRFSTFAGFLLFE 317
++G ++STF+G+LL++
Sbjct: 1109 IYGSSWKYSTFSGYLLYQ 1126
>gi|50428931 C1q domain containing 1 isoform 3 [Homo sapiens]
Length = 793
Score = 105 bits (263), Expect = 4e-23
Identities = 51/138 (36%), Positives = 87/138 (63%), Gaps = 3/138 (2%)
Query: 182 YPGIPPELQIAFMASLATHFS--NQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFT 239
YP +P ++++AF A+ ++ + + I+F + N+G FD+ GRF PV+G Y F
Sbjct: 656 YP-LPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFI 714
Query: 240 FSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMGNGA 299
F M+K +YV LM N + S Y+ + +T+SNHA+L+L +GD++WLR+ GA
Sbjct: 715 FHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGA 774
Query: 300 LHGDHQRFSTFAGFLLFE 317
++G ++STF+G+LL++
Sbjct: 775 IYGSSWKYSTFSGYLLYQ 792
>gi|23503235 C1q domain containing 1 isoform 2 [Homo sapiens]
Length = 1077
Score = 105 bits (263), Expect = 4e-23
Identities = 51/138 (36%), Positives = 87/138 (63%), Gaps = 3/138 (2%)
Query: 182 YPGIPPELQIAFMASLATHFS--NQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFT 239
YP +P ++++AF A+ ++ + + I+F + N+G FD+ GRF PV+G Y F
Sbjct: 940 YP-LPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFI 998
Query: 240 FSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMGNGA 299
F M+K +YV LM N + S Y+ + +T+SNHA+L+L +GD++WLR+ GA
Sbjct: 999 FHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGA 1058
Query: 300 LHGDHQRFSTFAGFLLFE 317
++G ++STF+G+LL++
Sbjct: 1059 IYGSSWKYSTFSGYLLYQ 1076
>gi|56847616 C1q and tumor necrosis factor related protein 9B [Homo
sapiens]
Length = 333
Score = 103 bits (258), Expect = 2e-22
Identities = 71/227 (31%), Positives = 105/227 (46%), Gaps = 10/227 (4%)
Query: 100 GQSPQTGGLPPDCSKCCHGDYSFRGYQGPPG---PPGPPGIPGNHGNNGNNGATGHEGAK 156
G+ G P K GD G +GP G P GP G+PG G G G G G
Sbjct: 110 GEKGLRGETGPQGQKGNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPT 169
Query: 157 GEKGDKGDLGPRGERGQHGPKGEKGYPGIPPELQIAFMASLATHFSNQNSGIIFSSVETN 216
G +G+ G G RG +G G KG+ G + P+ ++ + F + + I F + N
Sbjct: 170 GPQGEPGVRGIRGWKGDRGEKGKIGETLVLPKSAFTVGLTVLSKFPSSDVPIKFDKILYN 229
Query: 217 IGNFFDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDT 276
N +D G+F ++GVY+FT+ + V V L+ NG + + + D
Sbjct: 230 EFNHYDTAVGKFTCHIAGVYYFTYHITVFS--RNVQVSLVKNGVKILHTRDAYVSSE-DQ 286
Query: 277 SSNHAVLKLAKGDEVWLRMGNG----ALHGDHQRFSTFAGFLLFETK 319
+S VL+L GDE+WL++ G L D +TF GFLLF ++
Sbjct: 287 ASGSIVLQLKLGDEMWLQVTGGERFNGLFADEDDDTTFTGFLLFSSQ 333
Score = 62.4 bits (150), Expect = 5e-10
Identities = 30/62 (48%), Positives = 35/62 (56%)
Query: 123 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 182
+G +G G PG PG PG G +G G G +G KG KGD G RG G+HGPKG G
Sbjct: 49 KGDKGDAGEPGCPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGP 108
Query: 183 PG 184
G
Sbjct: 109 MG 110
Score = 61.6 bits (148), Expect = 9e-10
Identities = 29/52 (55%), Positives = 34/52 (65%)
Query: 133 GPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYPG 184
G PGIPGN G+NG G G +GAKG+KGD G+ G G G+ G GEKG G
Sbjct: 26 GHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGCPGSPGKDGTSGEKGERG 77
>gi|14149712 C1q and tumor necrosis factor related protein 5
precursor [Homo sapiens]
Length = 243
Score = 100 bits (248), Expect = 2e-21
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 14/204 (6%)
Query: 124 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGE------KGDKGDLGPRGERGQHGPK 177
G G PG G G+PG G +G +GA G G KGE G +GD GPRGE G GP
Sbjct: 33 GLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPT 92
Query: 178 GEKGYPGIPPELQIAFMASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYF 237
G G +PP + S + ++ + F V N +D +TG+F V GVY+
Sbjct: 93 GPAGECSVPPRSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYY 152
Query: 238 FTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKG--KSDTSSNHAVLKLAKGDEVWLRM 295
F + + L+ NG ++ S + + G K + S A+++L D+VW+++
Sbjct: 153 FAVHATVYR--ASLQFDLVKNGESIASFFQF-FGGWPKPASLSGGAMVRLEPEDQVWVQV 209
Query: 296 GNG---ALHGDHQRFSTFAGFLLF 316
G G ++ + STF+GFL++
Sbjct: 210 GVGDYIGIYASIKTDSTFSGFLVY 233
>gi|32967300 C1q and tumor necrosis factor related protein 6 [Homo
sapiens]
Length = 278
Score = 98.2 bits (243), Expect = 9e-21
Identities = 63/198 (31%), Positives = 94/198 (47%), Gaps = 28/198 (14%)
Query: 126 QGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYPGI 185
+G G PGP G+PG G G G G +G+KG+ KGE G PG
Sbjct: 96 KGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGD------------------KGEMGSPGA 137
Query: 186 PPELQ-IAFMA--SLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSM 242
P + + AF A H ++F V N+ FD+ TG+F AP+ G+YFF+ ++
Sbjct: 138 PCQKRFFAFSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNV 197
Query: 243 MKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRM-----GN 297
+ +E YV++MHN +Y+ + +S S +L LA GD VW+R+ N
Sbjct: 198 HSW-NYKETYVHIMHNQKEAVILYA-QPSERSIMQSQSVMLDLAYGDRVWVRLFKRQREN 255
Query: 298 GALHGDHQRFSTFAGFLL 315
D + TF+G L+
Sbjct: 256 AIYSNDFDTYITFSGHLI 273
>gi|32967294 C1q and tumor necrosis factor related protein 6 [Homo
sapiens]
Length = 278
Score = 98.2 bits (243), Expect = 9e-21
Identities = 63/198 (31%), Positives = 94/198 (47%), Gaps = 28/198 (14%)
Query: 126 QGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYPGI 185
+G G PGP G+PG G G G G +G+KG+ KGE G PG
Sbjct: 96 KGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGD------------------KGEMGSPGA 137
Query: 186 PPELQ-IAFMA--SLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSM 242
P + + AF A H ++F V N+ FD+ TG+F AP+ G+YFF+ ++
Sbjct: 138 PCQKRFFAFSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNV 197
Query: 243 MKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRM-----GN 297
+ +E YV++MHN +Y+ + +S S +L LA GD VW+R+ N
Sbjct: 198 HSW-NYKETYVHIMHNQKEAVILYA-QPSERSIMQSQSVMLDLAYGDRVWVRLFKRQREN 255
Query: 298 GALHGDHQRFSTFAGFLL 315
D + TF+G L+
Sbjct: 256 AIYSNDFDTYITFSGHLI 273
>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
Length = 680
Score = 97.4 bits (241), Expect = 1e-20
Identities = 71/231 (30%), Positives = 98/231 (42%), Gaps = 41/231 (17%)
Query: 124 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEG--AKGEKGDKGDLGPRGERGQHGPKGEKG 181
G +GP GPPG PG PG+ G+ G+ G G G KG G G GP G RG G G G
Sbjct: 449 GTRGPIGPPGIPGFPGSKGDPGSPGPPGPAGIATKGLNGPTGPPGPPGPRGHSGEPGLPG 508
Query: 182 YPGIP------------------PELQ----------------IAFMASLATHFSNQNSG 207
PG P P L AF L+ + +
Sbjct: 509 PPGPPGPPGQAVMPEGFIKAGQRPSLSGTPLVSANQGVTGMPVSAFTVILSKAYPAIGTP 568
Query: 208 IIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYS 267
I F + N +D TG F + G+Y+F++ + H V+V L NG V Y
Sbjct: 569 IPFDKILYNRQQHYDPRTGIFTCQIPGIYYFSYHV--HVKGTHVWVGLYKNGTPVMYTYD 626
Query: 268 YEMKGKSDTSSNHAVLKLAKGDEVWLRMGN---GALHGDHQRFSTFAGFLL 315
KG D +S A++ L + D+VWL++ N L+ S+F+GFL+
Sbjct: 627 EYTKGYLDQASGSAIIDLTENDQVWLQLPNAESNGLYSSEYVHSSFSGFLV 677
Score = 68.2 bits (165), Expect = 9e-12
Identities = 32/68 (47%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 118 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 177
G+ G QGP GP GPPG+ G G NG G G KG++G G++GP G G GP
Sbjct: 200 GERGLPGPQGPTGPSGPPGV----GKRGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPP 255
Query: 178 GEKGYPGI 185
GE+G GI
Sbjct: 256 GERGPEGI 263
Score = 65.5 bits (158), Expect = 6e-11
Identities = 31/62 (50%), Positives = 36/62 (58%)
Query: 123 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 182
+G QGP G PG PG+ G GN G G G G+ G G KG+ GP G G G KGE+G
Sbjct: 322 KGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGS 381
Query: 183 PG 184
PG
Sbjct: 382 PG 383
Score = 63.9 bits (154), Expect = 2e-10
Identities = 31/63 (49%), Positives = 36/63 (57%)
Query: 124 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYP 183
G QGP G PG G+PG G G G G+ GAKGE+G G G G G+ G G KG P
Sbjct: 344 GPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSDGKPGYPGKPGLDGPKGNP 403
Query: 184 GIP 186
G+P
Sbjct: 404 GLP 406
Score = 62.8 bits (151), Expect = 4e-10
Identities = 33/69 (47%), Positives = 37/69 (53%)
Query: 124 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYP 183
G GPPG PGP G G G G+NG G GA G G +G +GP G G G KG+ G P
Sbjct: 413 GVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGAPGIPGTRGPIGPPGIPGFPGSKGDPGSP 472
Query: 184 GIPPELQIA 192
G P IA
Sbjct: 473 GPPGPAGIA 481
Score = 62.0 bits (149), Expect = 7e-10
Identities = 32/65 (49%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 120 YSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGE 179
Y G QG PG PGPPG P G G G G G +G G KGD+GP G G GP G
Sbjct: 85 YGSPGLQGEPGLPGPPG-PSAVGKPGVPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPGP 143
Query: 180 KGYPG 184
G PG
Sbjct: 144 PGIPG 148
Score = 61.2 bits (147), Expect = 1e-09
Identities = 32/63 (50%), Positives = 35/63 (55%)
Query: 124 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYP 183
G +G PG PGP G PG G G G G GAKG G G+ GPRG G G +G G P
Sbjct: 398 GPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGAPGIPGTRGPIGPP 457
Query: 184 GIP 186
GIP
Sbjct: 458 GIP 460
Score = 60.1 bits (144), Expect = 3e-09
Identities = 35/90 (38%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Query: 100 GQSPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEK 159
G +TG P G+ G G PG PG PG+ G GN G G G G G
Sbjct: 359 GPKGETGPAGPAGYPGAKGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGVGGPP 418
Query: 160 GDKGDLGPRGERGQHGPKGE---KGYPGIP 186
G G +GP G +G G GE +G PGIP
Sbjct: 419 GLPGPVGPAGAKGMPGHNGEAGPRGAPGIP 448
Score = 58.2 bits (139), Expect = 1e-08
Identities = 34/80 (42%), Positives = 41/80 (51%), Gaps = 16/80 (20%)
Query: 123 RGYQGPPGPPGPPGIPGNHGNNGNNGATGH--EGAKGEKGDKGDLGPR------------ 168
RG QG PGPPGP G G+ G +G G G+ G +GE G G GP
Sbjct: 56 RGEQGTPGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGPSAVGKPGVPGLPG 115
Query: 169 --GERGQHGPKGEKGYPGIP 186
GERG +GPKG+ G G+P
Sbjct: 116 KPGERGPYGPKGDVGPAGLP 135
Score = 58.2 bits (139), Expect = 1e-08
Identities = 35/91 (38%), Positives = 42/91 (46%), Gaps = 26/91 (28%)
Query: 124 GYQGPPGPPG--PPGIPGNHGNNGNNGATGHEGAKGEKGDKG------------DLGPRG 169
G GPPGPPG PG+PG G G G G GAKGE+G G ++GP+G
Sbjct: 288 GIAGPPGPPGFGKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPGNMGPQG 347
Query: 170 ERG------------QHGPKGEKGYPGIPPE 188
+G + GP G GYPG E
Sbjct: 348 PKGIPGSHGLPGPKGETGPAGPAGYPGAKGE 378
Score = 57.8 bits (138), Expect = 1e-08
Identities = 35/100 (35%), Positives = 42/100 (42%), Gaps = 15/100 (15%)
Query: 100 GQSPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGN------------- 146
G + G + P K G + G +G GP GP G PG G G+
Sbjct: 335 GLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSDGKPGYPGKP 394
Query: 147 --NGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYPG 184
+G G+ G G KGD G GP G G GP G KG PG
Sbjct: 395 GLDGPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPG 434
Score = 57.4 bits (137), Expect = 2e-08
Identities = 36/92 (39%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 103 PQTGGLPPDCSKCCHGDYSFRGYQGPPGP---PGPPGIPGNHGNNGNNGATGHEGAKGEK 159
P G+P G +G G PGP PG G PG G NG G G+ GA G
Sbjct: 141 PGPPGIPGPAGISVPGKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGY-GAPGRP 199
Query: 160 GDKGDLGPRGERGQHGP-----KGEKGYPGIP 186
G++G GP+G G GP +GE G PG P
Sbjct: 200 GERGLPGPQGPTGPSGPPGVGKRGENGVPGQP 231
Score = 55.8 bits (133), Expect = 5e-08
Identities = 33/88 (37%), Positives = 38/88 (43%), Gaps = 24/88 (27%)
Query: 123 RGYQGPPGPPGPPGI------------------PGNHGNNGNNGATGHEGAKGEKGDKGD 164
+G +GP G PG PG PGN G G G G G G KG+ G
Sbjct: 307 KGERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGP 366
Query: 165 LGP------RGERGQHGPKGEKGYPGIP 186
GP +GERG G G+ GYPG P
Sbjct: 367 AGPAGYPGAKGERGSPGSDGKPGYPGKP 394
Score = 54.7 bits (130), Expect = 1e-07
Identities = 34/83 (40%), Positives = 41/83 (49%), Gaps = 22/83 (26%)
Query: 124 GYQGPPGPPGP---------PGIPGNHGNNGNNG--ATGHEGAKGEKGDKGDLGP----- 167
G QGP G PGP PG+PG +G G G A G G +G G +G GP
Sbjct: 159 GQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYGAPGRPGERGLPGPQGPTGPSGPPG 218
Query: 168 ---RGER---GQHGPKGEKGYPG 184
RGE GQ G KG++G+PG
Sbjct: 219 VGKRGENGVPGQPGIKGDRGFPG 241
Score = 53.5 bits (127), Expect = 2e-07
Identities = 34/88 (38%), Positives = 38/88 (43%), Gaps = 19/88 (21%)
Query: 118 GDYSFRGYQGPPGPPG-----------------PPGIPGNHGNNGNNGATGHEGAKGEKG 160
G G +GPPGPPG P G PG G G GA G G G+KG
Sbjct: 130 GPAGLPGPRGPPGPPGIPGPAGISVPGKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKG 189
Query: 161 DKGDLGP--RGERGQHGPKGEKGYPGIP 186
+ G P GERG GP+G G G P
Sbjct: 190 EMGYGAPGRPGERGLPGPQGPTGPSGPP 217
Score = 53.1 bits (126), Expect = 3e-07
Identities = 39/107 (36%), Positives = 43/107 (40%), Gaps = 25/107 (23%)
Query: 107 GLPPDCSKCCHGDYSFRGYQGPP---------------------GPPGPPGIPGNHGNN- 144
GLP G G G P GPPGPPGIPG G +
Sbjct: 95 GLPGPPGPSAVGKPGVPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGISV 154
Query: 145 -GNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY--PGIPPE 188
G G G GA G +G G+ G G G +G KGE GY PG P E
Sbjct: 155 PGKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYGAPGRPGE 201
Score = 52.4 bits (124), Expect = 5e-07
Identities = 36/97 (37%), Positives = 39/97 (40%), Gaps = 28/97 (28%)
Query: 118 GDYSFRGYQGPPGPPGP-----------------------PGIPGNHGNNGNNGATGHE- 153
GD F G GP GPPGP PGIPG G G G G
Sbjct: 235 GDRGFPGEMGPIGPPGPQGPPGERGPEGIGKPGAAGAPGQPGIPGTKGLPGAPGIAGPPG 294
Query: 154 ----GAKGEKGDKGDLGPRGERGQHGPKGEKGYPGIP 186
G G G KG+ GP G G G KGE+G G+P
Sbjct: 295 PPGFGKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLP 331
>gi|56786155 complement component 1, q subcomponent, C chain
precursor [Homo sapiens]
Length = 245
Score = 93.6 bits (231), Expect = 2e-19
Identities = 69/217 (31%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 118 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 177
G Y G G PG PG G G G G G G +G KG KG+ G G G++GP
Sbjct: 31 GCYGIPGMPGLPGAPGKDGYDGLPGPKGEPGIPAIPGIRGPKGQKGEPGLPGHPGKNGPM 90
Query: 178 GEKGYPGIP----------------PELQIAFMASLATHF-SNQNSGIIFSSVETNIGNF 220
G G PG+P + Q F + TH NS I F++V TN
Sbjct: 91 GPPGMPGVPGPMGIPGEPGEEGRYKQKFQSVFTVTRQTHQPPAPNSLIRFNAVLTNPQGD 150
Query: 221 FDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNH 280
+D TG+F V G+Y+F + + V L +G V + + K + +S
Sbjct: 151 YDTSTGKFTCKVPGLYYFVYHA---SHTANLCVLLYRSGVKVVTFCGHTSK-TNQVNSGG 206
Query: 281 AVLKLAKGDEVWLRMGN-GALHGDHQRFSTFAGFLLF 316
+L+L G+EVWL + + + G S F+GFLLF
Sbjct: 207 VLLRLQVGEEVWLAVNDYYDMVGIQGSDSVFSGFLLF 243
>gi|166235903 complement component 1, q subcomponent, C chain
precursor [Homo sapiens]
Length = 245
Score = 93.6 bits (231), Expect = 2e-19
Identities = 69/217 (31%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 118 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 177
G Y G G PG PG G G G G G G +G KG KG+ G G G++GP
Sbjct: 31 GCYGIPGMPGLPGAPGKDGYDGLPGPKGEPGIPAIPGIRGPKGQKGEPGLPGHPGKNGPM 90
Query: 178 GEKGYPGIP----------------PELQIAFMASLATHF-SNQNSGIIFSSVETNIGNF 220
G G PG+P + Q F + TH NS I F++V TN
Sbjct: 91 GPPGMPGVPGPMGIPGEPGEEGRYKQKFQSVFTVTRQTHQPPAPNSLIRFNAVLTNPQGD 150
Query: 221 FDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNH 280
+D TG+F V G+Y+F + + V L +G V + + K + +S
Sbjct: 151 YDTSTGKFTCKVPGLYYFVYHA---SHTANLCVLLYRSGVKVVTFCGHTSK-TNQVNSGG 206
Query: 281 AVLKLAKGDEVWLRMGN-GALHGDHQRFSTFAGFLLF 316
+L+L G+EVWL + + + G S F+GFLLF
Sbjct: 207 VLLRLQVGEEVWLAVNDYYDMVGIQGSDSVFSGFLLF 243
>gi|87298828 complement component 1, q subcomponent, B chain
precursor [Homo sapiens]
Length = 253
Score = 92.4 bits (228), Expect = 5e-19
Identities = 71/213 (33%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 124 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYP 183
G G PGP G PG PG G G G G G GEKGD G G G+ G GP G KG P
Sbjct: 42 GIPGTPGPDGQPGTPGIKGEKGLPGLAGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGP 101
Query: 184 GIP-------------PELQIAFMASLATHFS-NQNSGIIFSSVETNIGNFFDVMTGRFG 229
G P +IAF A+ + ++ I F V TN+ N ++ +G+F
Sbjct: 102 GAPGAPGPKGESGDYKATQKIAFSATRTINVPLRRDQTIRFDHVITNMNNNYEPRSGKFT 161
Query: 230 APVSGVYFFTFSMMKHEDVEEVYVYLMHNGN-----TVFSMYSYEMKGKSDTSSNHAVLK 284
V G+Y+FT+ + + V LM F Y+Y ++ VLK
Sbjct: 162 CKVPGLYYFTYHASSRGN---LCVNLMRGRERAQKVVTFCDYAY---NTFQVTTGGMVLK 215
Query: 285 LAKGDEVWLR-MGNGALHGDHQRFSTFAGFLLF 316
L +G+ V+L+ +L G S F+GFLLF
Sbjct: 216 LEQGENVFLQATDKNSLLGMEGANSIFSGFLLF 248
>gi|122937273 hypothetical protein LOC131149 [Homo sapiens]
Length = 477
Score = 91.7 bits (226), Expect = 8e-19
Identities = 68/219 (31%), Positives = 95/219 (43%), Gaps = 6/219 (2%)
Query: 100 GQSPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEK 159
GQ + G SK G G G PG G PGI G G G G G G KG+
Sbjct: 254 GQKGEGGMKGEKGSKGDSGMEGKSGRNGLPGAKGDPGIKGEKGELGPPGLLGPTGPKGDI 313
Query: 160 GDKGDLGPRGERGQHGPKGEKGYPGIPPELQIAFMASLATHFSNQNSGIIFSSVETNIGN 219
G+KG GP G++G G KG KG P + AF A L+ F N I F + N
Sbjct: 314 GNKGVRGPTGKKGSRGFKGSKGELARVP--RSAFSAGLSKPFPPPNIPIKFEKILYNDQG 371
Query: 220 FFDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSN 279
+ +TG+F + G Y F++ + + L+ F + D +S
Sbjct: 372 NYSPVTGKFNCSIPGTYVFSYHITVRG--RPARISLVAQNKKQFKSRETLYGQEIDQASL 429
Query: 280 HAVLKLAKGDEVWLRMGN--GALHGDHQRFSTFAGFLLF 316
+LKL+ GD+VWL + ++ + S F GFLL+
Sbjct: 430 LVILKLSAGDQVWLEVSKDWNGVYVSAEDDSIFTGFLLY 468
Score = 63.5 bits (153), Expect = 2e-10
Identities = 33/73 (45%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 118 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGE------KGDKGDLGPRGER 171
GD GY G PG G PG G+ GN G G G +G+KG+ KG+KGD G G
Sbjct: 158 GDQGVPGYPGKPGAQGEPGPKGDKGNIGLGGVKGQKGSKGDTCGNCTKGEKGDQGAMGSP 217
Query: 172 GQHGPKGEKGYPG 184
G HG G KG G
Sbjct: 218 GLHGGPGAKGEKG 230
Score = 60.1 bits (144), Expect = 3e-09
Identities = 33/87 (37%), Positives = 43/87 (49%), Gaps = 12/87 (13%)
Query: 111 DCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGE 170
+C CC +G G G PGP G GN G G G G +G +G KG+KG G RG+
Sbjct: 100 NCCDCCSPVPGQKGEPGETGQPGPKGEAGNLGIPGPPGVVGPQGPRGYKGEKGLKGERGD 159
Query: 171 ------------RGQHGPKGEKGYPGI 185
+G+ GPKG+KG G+
Sbjct: 160 QGVPGYPGKPGAQGEPGPKGDKGNIGL 186
Score = 60.1 bits (144), Expect = 3e-09
Identities = 29/63 (46%), Positives = 35/63 (55%)
Query: 123 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 182
RG QG PG PG PG G G G+ G G G KG+KG KGD +G+ G +G G
Sbjct: 157 RGDQGVPGYPGKPGAQGEPGPKGDKGNIGLGGVKGQKGSKGDTCGNCTKGEKGDQGAMGS 216
Query: 183 PGI 185
PG+
Sbjct: 217 PGL 219
Score = 53.1 bits (126), Expect = 3e-07
Identities = 28/58 (48%), Positives = 31/58 (53%)
Query: 124 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKG 181
G QGP G G G+ G G+ G G G GA+GE G KGD G G G G KG KG
Sbjct: 140 GPQGPRGYKGEKGLKGERGDQGVPGYPGKPGAQGEPGPKGDKGNIGLGGVKGQKGSKG 197
>gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 90.9 bits (224), Expect = 1e-18
Identities = 78/261 (29%), Positives = 104/261 (39%), Gaps = 55/261 (21%)
Query: 107 GLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGA--------KGE 158
G+P D + G G GP GP GPPGIPG G G G G G G
Sbjct: 486 GIPGD--QGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGP 543
Query: 159 KGDKGDLGPRGERGQHGPKGEKGYPGIP--------------PELQI------------- 191
G G LGP+G+ G GP G G PG P P++ +
Sbjct: 544 PGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPPHAYGA 603
Query: 192 -------------AFMASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFF 238
AF A L F + + F+ + N ++ TG F V GVY+F
Sbjct: 604 KKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFNKLLYNGRQNYNPQTGIFTCEVPGVYYF 663
Query: 239 TFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMGN- 297
+ + H V+V L N V Y KG D +S AVL L GD V+L+M +
Sbjct: 664 AYHV--HCKGGNVWVALFKNNEPVMYTYDEYKKGFLDQASGSAVLLLRPGDRVFLQMPSE 721
Query: 298 --GALHGDHQRFSTFAGFLLF 316
L+ S+F+G+LL+
Sbjct: 722 QAAGLYAGQYVHSSFSGYLLY 742
Score = 68.9 bits (167), Expect = 6e-12
Identities = 38/90 (42%), Positives = 43/90 (47%), Gaps = 22/90 (24%)
Query: 118 GDYSFRGYQGPPGPPGPPGIPGNH----------------------GNNGNNGATGHEGA 155
G+ RG GP GPPGPPG+PG+ G G GA G GA
Sbjct: 118 GEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGA 177
Query: 156 KGEKGDKGDLGPRGERGQHGPKGEKGYPGI 185
KGE G KG++GP G G GP G G PGI
Sbjct: 178 KGEIGQKGEIGPMGIPGPQGPPGPHGLPGI 207
Score = 63.5 bits (153), Expect = 2e-10
Identities = 33/66 (50%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 123 RGYQGPPGPPGPPGIPG--NHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEK 180
+G QG PG PGPPG+PG G G G G G G G +G+ GP G G GP GE
Sbjct: 333 KGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEP 392
Query: 181 GYPGIP 186
G PGIP
Sbjct: 393 GLPGIP 398
Score = 62.4 bits (150), Expect = 5e-10
Identities = 35/84 (41%), Positives = 40/84 (47%), Gaps = 16/84 (19%)
Query: 118 GDYSFRGYQGPPGP-----------PGPPGIPGNHGNNGNNGATGHEGAKGEKGDK---- 162
G G QGPPGP PG PG PG G+ G G G +G +G KGDK
Sbjct: 188 GPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGM 247
Query: 163 -GDLGPRGERGQHGPKGEKGYPGI 185
G G +G G HGP G G PG+
Sbjct: 248 PGAPGVKGPPGMHGPPGPVGLPGV 271
Score = 62.4 bits (150), Expect = 5e-10
Identities = 30/62 (48%), Positives = 34/62 (54%)
Query: 124 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYP 183
G GP GPPGP G PG G G G G G G +G G +GP+GE GQ G G G P
Sbjct: 417 GIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVP 476
Query: 184 GI 185
G+
Sbjct: 477 GL 478
Score = 58.5 bits (140), Expect = 7e-09
Identities = 31/66 (46%), Positives = 36/66 (54%)
Query: 124 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYP 183
G G GPPG PG+PG G G GA G G KGE G G GP G +G+ G +G G P
Sbjct: 381 GAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKP 440
Query: 184 GIPPEL 189
G E+
Sbjct: 441 GFLGEV 446
Score = 58.5 bits (140), Expect = 7e-09
Identities = 38/100 (38%), Positives = 45/100 (45%), Gaps = 23/100 (23%)
Query: 102 SPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGD 161
+P GG P G+ G GP GPPG G PG G G G G G KGE G
Sbjct: 382 APGIGGPP--------GEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGL 433
Query: 162 K---------GDLGPRGERGQHGP------KGEKGYPGIP 186
+ G++GP G RG GP G+KG PG+P
Sbjct: 434 QGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLP 473
Score = 58.2 bits (139), Expect = 1e-08
Identities = 37/87 (42%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 118 GDYSFRGYQGPPGP---------PGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGD---- 164
G+ G QGPPGP PG PG G G G G G G KGE G KG
Sbjct: 414 GEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLP 473
Query: 165 -----LGPRGERGQHGPKGEKGYPGIP 186
LGP+GE G G +G +G PGIP
Sbjct: 474 GVPGLLGPKGEPGIPGDQGLQGPPGIP 500
Score = 56.6 bits (135), Expect = 3e-08
Identities = 31/67 (46%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 123 RGYQGPPGPPG---PPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGE 179
RG +GP G PG PPG PG G G G G G G KG+ G +GP+G G G G
Sbjct: 374 RGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGL 433
Query: 180 KGYPGIP 186
+G+PG P
Sbjct: 434 QGFPGKP 440
Score = 56.2 bits (134), Expect = 4e-08
Identities = 33/89 (37%), Positives = 41/89 (46%)
Query: 98 FWGQSPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKG 157
F G+ G + P + G +G G G PG PG+PG G G G G +G +G
Sbjct: 436 FPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQG 495
Query: 158 EKGDKGDLGPRGERGQHGPKGEKGYPGIP 186
G G GP G G G G KG PG+P
Sbjct: 496 PPGIPGIGGPSGPIGPPGIPGPKGEPGLP 524
Score = 55.8 bits (133), Expect = 5e-08
Identities = 35/76 (46%), Positives = 41/76 (53%), Gaps = 10/76 (13%)
Query: 124 GYQGP---PGPPGPPGIPG--NHGNNGNNGATGHEGAKGEKGDKGDLGPRG-----ERGQ 173
G QGP PG GPPGIPG G +G G G G KGE+G G GP G + G
Sbjct: 296 GPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGF 355
Query: 174 HGPKGEKGYPGIPPEL 189
GPKG++G G+P L
Sbjct: 356 PGPKGDRGMGGVPGAL 371
Score = 55.8 bits (133), Expect = 5e-08
Identities = 30/63 (47%), Positives = 33/63 (52%)
Query: 124 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYP 183
G +G PG PG PG+ G G G G G +G G G G GP G G GPKGE G P
Sbjct: 465 GQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLP 524
Query: 184 GIP 186
G P
Sbjct: 525 GPP 527
Score = 55.1 bits (131), Expect = 8e-08
Identities = 30/65 (46%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 124 GYQGPPG---PPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEK 180
G +GPPG PPGP G+PG G G G G +G G+ G G+ GP+G G G +G
Sbjct: 252 GVKGPPGMHGPPGPVGLPGV-GKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPP 310
Query: 181 GYPGI 185
G PGI
Sbjct: 311 GIPGI 315
Score = 53.9 bits (128), Expect = 2e-07
Identities = 29/65 (44%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 124 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEK--GDKGDLGPRGERGQHGPKGEKG 181
G+ GP GP G PG PG G G G G +G G G G G G+ G G KGE+G
Sbjct: 278 GFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQG 337
Query: 182 YPGIP 186
PG+P
Sbjct: 338 LPGLP 342
Score = 53.9 bits (128), Expect = 2e-07
Identities = 28/64 (43%), Positives = 33/64 (51%)
Query: 123 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 182
+G G GP GPPG G G G G G G G G +G GP G +G+ G KG G
Sbjct: 413 KGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGL 472
Query: 183 PGIP 186
PG+P
Sbjct: 473 PGVP 476
Score = 52.4 bits (124), Expect = 5e-07
Identities = 37/87 (42%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 103 PQTGGLP-PDCSKCCHGDYSFRGYQGPPG---PPGPPGIPGNHGNNGNNGATGHEGAKGE 158
P GLP P K G G G PG P G PGIPG+ G G G G G G
Sbjct: 449 PGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGP 508
Query: 159 KGDKGDLGPRGERGQHGPKGEKGYPGI 185
G G GP+GE G GP G+PGI
Sbjct: 509 IGPPGIPGPKGEPGLPGP---PGFPGI 532
Score = 49.7 bits (117), Expect = 3e-06
Identities = 29/65 (44%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 124 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGER---GQHGPKGEK 180
G GP G GP G PG G G G G G G G G GP+GE G GP G K
Sbjct: 369 GALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPK 428
Query: 181 GYPGI 185
G PG+
Sbjct: 429 GEPGL 433
Score = 33.1 bits (74), Expect = 0.34
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 162 KGDLGPRGERGQHGPKGEKGYPG 184
+G+ GPRGE G GP G G PG
Sbjct: 117 RGEQGPRGEPGPRGPPGPPGLPG 139
>gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 90.9 bits (224), Expect = 1e-18
Identities = 78/261 (29%), Positives = 104/261 (39%), Gaps = 55/261 (21%)
Query: 107 GLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGA--------KGE 158
G+P D + G G GP GP GPPGIPG G G G G G G
Sbjct: 486 GIPGD--QGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGP 543
Query: 159 KGDKGDLGPRGERGQHGPKGEKGYPGIP--------------PELQI------------- 191
G G LGP+G+ G GP G G PG P P++ +
Sbjct: 544 PGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPPHAYGA 603
Query: 192 -------------AFMASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFF 238
AF A L F + + F+ + N ++ TG F V GVY+F
Sbjct: 604 KKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFNKLLYNGRQNYNPQTGIFTCEVPGVYYF 663
Query: 239 TFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMGN- 297
+ + H V+V L N V Y KG D +S AVL L GD V+L+M +
Sbjct: 664 AYHV--HCKGGNVWVALFKNNEPVMYTYDEYKKGFLDQASGSAVLLLRPGDRVFLQMPSE 721
Query: 298 --GALHGDHQRFSTFAGFLLF 316
L+ S+F+G+LL+
Sbjct: 722 QAAGLYAGQYVHSSFSGYLLY 742
Score = 68.9 bits (167), Expect = 6e-12
Identities = 38/90 (42%), Positives = 43/90 (47%), Gaps = 22/90 (24%)
Query: 118 GDYSFRGYQGPPGPPGPPGIPGNH----------------------GNNGNNGATGHEGA 155
G+ RG GP GPPGPPG+PG+ G G GA G GA
Sbjct: 118 GEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGA 177
Query: 156 KGEKGDKGDLGPRGERGQHGPKGEKGYPGI 185
KGE G KG++GP G G GP G G PGI
Sbjct: 178 KGEIGQKGEIGPMGIPGPQGPPGPHGLPGI 207
Score = 63.5 bits (153), Expect = 2e-10
Identities = 33/66 (50%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 123 RGYQGPPGPPGPPGIPG--NHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEK 180
+G QG PG PGPPG+PG G G G G G G G +G+ GP G G GP GE
Sbjct: 333 KGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEP 392
Query: 181 GYPGIP 186
G PGIP
Sbjct: 393 GLPGIP 398
Score = 62.4 bits (150), Expect = 5e-10
Identities = 35/84 (41%), Positives = 40/84 (47%), Gaps = 16/84 (19%)
Query: 118 GDYSFRGYQGPPGP-----------PGPPGIPGNHGNNGNNGATGHEGAKGEKGDK---- 162
G G QGPPGP PG PG PG G+ G G G +G +G KGDK
Sbjct: 188 GPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGM 247
Query: 163 -GDLGPRGERGQHGPKGEKGYPGI 185
G G +G G HGP G G PG+
Sbjct: 248 PGAPGVKGPPGMHGPPGPVGLPGV 271
Score = 62.4 bits (150), Expect = 5e-10
Identities = 30/62 (48%), Positives = 34/62 (54%)
Query: 124 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYP 183
G GP GPPGP G PG G G G G G G +G G +GP+GE GQ G G G P
Sbjct: 417 GIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVP 476
Query: 184 GI 185
G+
Sbjct: 477 GL 478
Score = 58.5 bits (140), Expect = 7e-09
Identities = 31/66 (46%), Positives = 36/66 (54%)
Query: 124 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYP 183
G G GPPG PG+PG G G GA G G KGE G G GP G +G+ G +G G P
Sbjct: 381 GAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKP 440
Query: 184 GIPPEL 189
G E+
Sbjct: 441 GFLGEV 446
Score = 58.5 bits (140), Expect = 7e-09
Identities = 38/100 (38%), Positives = 45/100 (45%), Gaps = 23/100 (23%)
Query: 102 SPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGD 161
+P GG P G+ G GP GPPG G PG G G G G G KGE G
Sbjct: 382 APGIGGPP--------GEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGL 433
Query: 162 K---------GDLGPRGERGQHGP------KGEKGYPGIP 186
+ G++GP G RG GP G+KG PG+P
Sbjct: 434 QGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLP 473
Score = 58.2 bits (139), Expect = 1e-08
Identities = 37/87 (42%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 118 GDYSFRGYQGPPGP---------PGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGD---- 164
G+ G QGPPGP PG PG G G G G G G KGE G KG
Sbjct: 414 GEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLP 473
Query: 165 -----LGPRGERGQHGPKGEKGYPGIP 186
LGP+GE G G +G +G PGIP
Sbjct: 474 GVPGLLGPKGEPGIPGDQGLQGPPGIP 500
Score = 56.6 bits (135), Expect = 3e-08
Identities = 31/67 (46%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 123 RGYQGPPGPPG---PPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGE 179
RG +GP G PG PPG PG G G G G G G KG+ G +GP+G G G G
Sbjct: 374 RGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGL 433
Query: 180 KGYPGIP 186
+G+PG P
Sbjct: 434 QGFPGKP 440
Score = 56.2 bits (134), Expect = 4e-08
Identities = 33/89 (37%), Positives = 41/89 (46%)
Query: 98 FWGQSPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKG 157
F G+ G + P + G +G G G PG PG+PG G G G G +G +G
Sbjct: 436 FPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQG 495
Query: 158 EKGDKGDLGPRGERGQHGPKGEKGYPGIP 186
G G GP G G G G KG PG+P
Sbjct: 496 PPGIPGIGGPSGPIGPPGIPGPKGEPGLP 524
Score = 55.8 bits (133), Expect = 5e-08
Identities = 35/76 (46%), Positives = 41/76 (53%), Gaps = 10/76 (13%)
Query: 124 GYQGP---PGPPGPPGIPG--NHGNNGNNGATGHEGAKGEKGDKGDLGPRG-----ERGQ 173
G QGP PG GPPGIPG G +G G G G KGE+G G GP G + G
Sbjct: 296 GPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGF 355
Query: 174 HGPKGEKGYPGIPPEL 189
GPKG++G G+P L
Sbjct: 356 PGPKGDRGMGGVPGAL 371
Score = 55.8 bits (133), Expect = 5e-08
Identities = 30/63 (47%), Positives = 33/63 (52%)
Query: 124 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYP 183
G +G PG PG PG+ G G G G G +G G G G GP G G GPKGE G P
Sbjct: 465 GQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLP 524
Query: 184 GIP 186
G P
Sbjct: 525 GPP 527
Score = 55.1 bits (131), Expect = 8e-08
Identities = 30/65 (46%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 124 GYQGPPG---PPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEK 180
G +GPPG PPGP G+PG G G G G +G G+ G G+ GP+G G G +G
Sbjct: 252 GVKGPPGMHGPPGPVGLPGV-GKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPP 310
Query: 181 GYPGI 185
G PGI
Sbjct: 311 GIPGI 315
Score = 53.9 bits (128), Expect = 2e-07
Identities = 29/65 (44%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 124 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEK--GDKGDLGPRGERGQHGPKGEKG 181
G+ GP GP G PG PG G G G G +G G G G G G+ G G KGE+G
Sbjct: 278 GFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQG 337
Query: 182 YPGIP 186
PG+P
Sbjct: 338 LPGLP 342
Score = 53.9 bits (128), Expect = 2e-07
Identities = 28/64 (43%), Positives = 33/64 (51%)
Query: 123 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 182
+G G GP GPPG G G G G G G G G +G GP G +G+ G KG G
Sbjct: 413 KGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGL 472
Query: 183 PGIP 186
PG+P
Sbjct: 473 PGVP 476
Score = 52.4 bits (124), Expect = 5e-07
Identities = 37/87 (42%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 103 PQTGGLP-PDCSKCCHGDYSFRGYQGPPG---PPGPPGIPGNHGNNGNNGATGHEGAKGE 158
P GLP P K G G G PG P G PGIPG+ G G G G G G
Sbjct: 449 PGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGP 508
Query: 159 KGDKGDLGPRGERGQHGPKGEKGYPGI 185
G G GP+GE G GP G+PGI
Sbjct: 509 IGPPGIPGPKGEPGLPGP---PGFPGI 532
Score = 49.7 bits (117), Expect = 3e-06
Identities = 29/65 (44%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 124 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGER---GQHGPKGEK 180
G GP G GP G PG G G G G G G G G GP+GE G GP G K
Sbjct: 369 GALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPK 428
Query: 181 GYPGI 185
G PG+
Sbjct: 429 GEPGL 433
Score = 33.1 bits (74), Expect = 0.34
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 162 KGDLGPRGERGQHGPKGEKGYPG 184
+G+ GPRGE G GP G G PG
Sbjct: 117 RGEQGPRGEPGPRGPPGPPGLPG 139
>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
Length = 703
Score = 88.2 bits (217), Expect = 9e-18
Identities = 73/228 (32%), Positives = 98/228 (42%), Gaps = 28/228 (12%)
Query: 100 GQSPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGA----TGHEGA 155
G++ + G P G G GPPGPPGPPG PG G G G EGA
Sbjct: 495 GRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGVEGA 554
Query: 156 KGEKGDKGDLGPRGERGQHGPKGEKGYPGIPPELQIAFMASLATHFSNQNSGIIFSSVET 215
KG K G GE H AF A L + F + F
Sbjct: 555 VLGKGGKPQFG-LGELSAHATP--------------AFTAVLTSPFPASGMPVKFDRTLY 599
Query: 216 NIGNFFDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYE--MKGK 273
N + ++ TG F PV GVY+F + H V+ V++ N V + Y+Y+ KG
Sbjct: 600 NGHSGYNPATGIFTCPVGGVYYFAY----HVHVKGTNVWVALYKNNVPATYTYDEYKKGY 655
Query: 274 SDTSSNHAVLKLAKGDEVWLRMGN---GALHGDHQRFSTFAGFLLFET 318
D +S AVL+L D+VW++M + L+ S+F+GFLL T
Sbjct: 656 LDQASGGAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT 703
Score = 65.5 bits (158), Expect = 6e-11
Identities = 39/92 (42%), Positives = 45/92 (48%), Gaps = 13/92 (14%)
Query: 101 QSPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPG------PPGIPGNHGNNGNNGATGHEG 154
Q PQ G PP G G +GPPGP G PPG+PG G+ G +G G G
Sbjct: 351 QGPQGLGGPPGLP----GSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPG 406
Query: 155 AKGEKGDKGDLGPRGERGQHGPKGEKGYPGIP 186
GE+G G GP G GPKGE G+ G P
Sbjct: 407 VPGERGLPGAHGPPGPT---GPKGEPGFTGRP 435
Score = 64.3 bits (155), Expect = 1e-10
Identities = 36/86 (41%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 106 GGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNH-----GNNGNNGATGHEGAKGEKG 160
G + P G+ RG QG GPPGPPG+PG G G G G G +GE G
Sbjct: 132 GKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPG 191
Query: 161 DKGDLGPRGERGQHGPKGEKGYPGIP 186
+G+ GP G+RG G G G PG+P
Sbjct: 192 PQGEPGPPGDRGLKGDNG-VGQPGLP 216
Score = 62.4 bits (150), Expect = 5e-10
Identities = 30/67 (44%), Positives = 36/67 (53%)
Query: 118 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 177
G+ +G GPPG PG G+PG G G G G G G G +GD GP G G+ G
Sbjct: 349 GEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVP 408
Query: 178 GEKGYPG 184
GE+G PG
Sbjct: 409 GERGLPG 415
Score = 61.2 bits (147), Expect = 1e-09
Identities = 33/70 (47%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 118 GDYSFRGYQGPPGPPGPPGIPG--NHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHG 175
G G G G PGPPG+PG G G +G G G KGE G G GPRGE G G
Sbjct: 211 GQPGLPGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVG 270
Query: 176 PKGEKGYPGI 185
PKG G G+
Sbjct: 271 PKGPPGVDGV 280
Score = 60.5 bits (145), Expect = 2e-09
Identities = 32/65 (49%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 124 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYP 183
G QGP G GPPG+PG+ G G G G KGE G G G G RG GP G G P
Sbjct: 349 GEQGPQGLGGPPGLPGSAGLPGRRGPPG---PKGEAGPGGPPGVPGIRGDQGPSGLAGKP 405
Query: 184 GIPPE 188
G+P E
Sbjct: 406 GVPGE 410
Score = 59.3 bits (142), Expect = 4e-09
Identities = 31/64 (48%), Positives = 34/64 (53%)
Query: 123 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 182
RG QGP G G PG+PG G G +G G G KGE G G G G G G KG+ G
Sbjct: 393 RGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGL 452
Query: 183 PGIP 186
PG P
Sbjct: 453 PGQP 456
Score = 57.4 bits (137), Expect = 2e-08
Identities = 34/86 (39%), Positives = 38/86 (44%), Gaps = 15/86 (17%)
Query: 118 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGE---------------KGDK 162
G+ G GPPGP GP G PG G G G G G KG+ G +
Sbjct: 409 GERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQ 468
Query: 163 GDLGPRGERGQHGPKGEKGYPGIPPE 188
G GP G +G G KGE G PG P E
Sbjct: 469 GPAGPIGPQGLPGLKGEPGLPGPPGE 494
Score = 55.8 bits (133), Expect = 5e-08
Identities = 35/88 (39%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 103 PQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAK---GEK 159
P T G P +G G +G GP G PG+ G+ G G +G G +G + G
Sbjct: 301 PGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPP 360
Query: 160 GDKGDLGPRGERGQHGPKGEKGYPGIPP 187
G G G G RG GPKGE G PG PP
Sbjct: 361 GLPGSAGLPGRRGPPGPKGEAG-PGGPP 387
Score = 54.3 bits (129), Expect = 1e-07
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 123 RGYQGPPGPPGPPGI-----PGNHGNNGNNGATGHEGAKGEKGDKGDLGPR--GERGQHG 175
RG G GP GPPG+ PG G G G +G +G G +G G +GP G G G
Sbjct: 263 RGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPG 322
Query: 176 PKGEKGYPGIP 186
PKG++G G+P
Sbjct: 323 PKGDRGPAGVP 333
Score = 54.3 bits (129), Expect = 1e-07
Identities = 31/76 (40%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 118 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGH---------EGAKGEKGDKGDLGPR 168
GD G G PG PG G+PG HG G G G G G G KGDLG
Sbjct: 394 GDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLP 453
Query: 169 GERGQHGPKGEKGYPG 184
G+ G GP G G G
Sbjct: 454 GQPGLRGPSGIPGLQG 469
Score = 53.5 bits (127), Expect = 2e-07
Identities = 33/86 (38%), Positives = 39/86 (45%), Gaps = 14/86 (16%)
Query: 118 GDYSFRGYQGPPGPP--------GPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRG 169
G G GP GPP GPPG+PG G G G G G +G++G +G GP G
Sbjct: 103 GKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPG 162
Query: 170 ERGQH-----GPKGEKGYPGIPPELQ 190
G G G +G PG PP Q
Sbjct: 163 LPGPSGITIPGKPGAQGVPG-PPGFQ 187
Score = 52.8 bits (125), Expect = 4e-07
Identities = 33/82 (40%), Positives = 36/82 (43%), Gaps = 19/82 (23%)
Query: 124 GYQGPPGPPGPPGIPGN--------HGNNG--------NNGATGHEGAKGEKGDKGDLGP 167
G GP GPPGPPG PG HG G G G G G+ G G G
Sbjct: 83 GKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGL 142
Query: 168 RGE---RGQHGPKGEKGYPGIP 186
RGE RG G +G G PG+P
Sbjct: 143 RGEPGIRGDQGLRGPPGPPGLP 164
Score = 51.2 bits (121), Expect = 1e-06
Identities = 32/90 (35%), Positives = 38/90 (42%), Gaps = 28/90 (31%)
Query: 123 RGYQGPP------GPPGPPGIPGN--------HGNNGNNGATGHE--------------G 154
+G GPP GPPGPPG PG HG G G G G
Sbjct: 76 KGEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVG 135
Query: 155 AKGEKGDKGDLGPRGERGQHGPKGEKGYPG 184
G+ G +G+ G RG++G GP G G PG
Sbjct: 136 PPGQPGLRGEPGIRGDQGLRGPPGPPGLPG 165
Score = 32.7 bits (73), Expect = 0.44
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 162 KGDLGPRGERGQHGPKGEKGYPGIP 186
KG+ GP G+ G GP G G+PG P
Sbjct: 76 KGEPGPPGKPGPRGPPGPPGFPGKP 100
Score = 28.5 bits (62), Expect = 8.3
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 159 KGDKGDLGPRGERGQHGPKGEKGYPGI 185
KG+ G G G RG GP G G PG+
Sbjct: 76 KGEPGPPGKPGPRGPPGPPGFPGKPGM 102
>gi|7705753 complement component 1, q subcomponent, A chain
precursor [Homo sapiens]
Length = 245
Score = 84.7 bits (208), Expect = 1e-16
Identities = 62/198 (31%), Positives = 93/198 (46%), Gaps = 6/198 (3%)
Query: 124 GYQGPPGPPGPPGI-PGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 182
G +G G PG PGI G G G+ G G G G+ G G GP G RG G KG KG
Sbjct: 46 GLKGEQGEPGAPGIRTGIQGLKGDQGEPGPSGNPGKVGYPGPSGPLGARGIPGIKGTKGS 105
Query: 183 PGIPPELQIAFMASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSM 242
PG + +++ + + +IF +V TN + +GRF V G Y+FTF +
Sbjct: 106 PGNIKDQPRPAFSAIRRNPPMGGNVVIFDTVITNQEEPYQNHSGRFVCTVPGYYYFTFQV 165
Query: 243 MKHEDVEEVYVYLMHNGNTVFSMYSYEM--KGKSDTSSNHAVLKLAKGDEVWLRMG--NG 298
+ ++ + + G S+ + KG S VL+L +GD+VW+ G
Sbjct: 166 LSQWEI-CLSIVSSSRGQVRRSLGFCDTTNKGLFQVVSGGMVLQLQQGDQVWVEKDPKKG 224
Query: 299 ALHGDHQRFSTFAGFLLF 316
++ + S F+GFL+F
Sbjct: 225 HIYQGSEADSVFSGFLIF 242
Score = 34.7 bits (78), Expect = 0.12
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 160 GDKGDLGPRGERGQHGPKGEKGYPGIP 186
G KG+ G G RG+ G KGE+G PG P
Sbjct: 31 GKKGEAGRPGRRGRPGLKGEQGEPGAP 57
Score = 33.5 bits (75), Expect = 0.26
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 157 GEKGDKGDLGPRGERGQHGPKGEKGYPGIPPELQ 190
G+KG+ G G RG G G +GE G PGI +Q
Sbjct: 31 GKKGEAGRPGRRGRPGLKGEQGEPGAPGIRTGIQ 64
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 80.1 bits (196), Expect = 2e-15
Identities = 38/69 (55%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 123 RGYQGPPGPPGPPGIPGNHGN------NGNNGATGHEGAKGEKGDKGDLGPRGERGQHGP 176
RG QG PGP GPPG+PG G NG NG G G G KG+KGD G G G+ GP
Sbjct: 1814 RGEQGLPGPSGPPGLPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGASGREGRDGP 1873
Query: 177 KGEKGYPGI 185
KGE+G PGI
Sbjct: 1874 KGERGAPGI 1882
Score = 74.3 bits (181), Expect = 1e-13
Identities = 43/98 (43%), Positives = 50/98 (51%), Gaps = 23/98 (23%)
Query: 107 GLPPDCSKCCHGDYSFRGYQGPPGP------PGPPGIPGNHGNNGNNGATGHEGAKGEKG 160
GLP K GD RG +GPPGP PG PG+PG G+ G G G G KGEKG
Sbjct: 1392 GLPGTAMK---GDKGDRGERGPPGPGEGGIAPGEPGLPGLPGSPGPQGPVGPPGKKGEKG 1448
Query: 161 DK--------------GDLGPRGERGQHGPKGEKGYPG 184
D G+ GPRG G GPKG++G+PG
Sbjct: 1449 DSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPG 1486
Score = 72.0 bits (175), Expect = 7e-13
Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 11/80 (13%)
Query: 124 GYQGPPGPPGP--------PGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGP---RGERG 172
G GPPGPPGP PG+ G G G GA G G+ G++G KGD G +G+RG
Sbjct: 2082 GTPGPPGPPGPKVSVDEPGPGLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRG 2141
Query: 173 QHGPKGEKGYPGIPPELQIA 192
+ GP+G+ G PG+P E +A
Sbjct: 2142 EPGPRGQDGNPGLPGERGMA 2161
Score = 69.7 bits (169), Expect = 3e-12
Identities = 32/69 (46%), Positives = 40/69 (57%)
Query: 118 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 177
G+ +G +GPPG PG PG G G G G G G KG++GD G+ G G G GPK
Sbjct: 1634 GEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPK 1693
Query: 178 GEKGYPGIP 186
G++G PG P
Sbjct: 1694 GDRGEPGPP 1702
Score = 67.8 bits (164), Expect = 1e-11
Identities = 38/93 (40%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 100 GQSPQTGGLPPDCSKCCHGDYSFRG-----YQGPPGPPGPPGIPGNHGNNGNNGATGHEG 154
G++ + G D K G F+G G PGPPGPPG+ G+ G G GA G G
Sbjct: 2345 GRAGEPGDPGEDGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGAPGVVG 2404
Query: 155 AKGEKGDKGDL---GPRGERGQHGPKGEKGYPG 184
G+ G +G++ GP GERG GP G +G PG
Sbjct: 2405 FPGQTGPRGEMGQPGPSGERGLAGPPGREGIPG 2437
Score = 66.6 bits (161), Expect = 3e-11
Identities = 37/82 (45%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Query: 118 GDYSFRGYQGPPG-------PPGP------PGIPGNHGNNGNNGATGHEGAKGEKGDKGD 164
GD G QGPPG PPGP PG PG G G G G G GE+G++G+
Sbjct: 2006 GDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGE 2065
Query: 165 LGPRGERGQHGPKGEKGYPGIP 186
G RGE+G+ GP G G PG P
Sbjct: 2066 KGERGEQGRDGPPGLPGTPGPP 2087
Score = 66.6 bits (161), Expect = 3e-11
Identities = 32/64 (50%), Positives = 40/64 (62%)
Query: 123 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 182
RG +G G GP G+ G+ G G+NG G +G+KGE GDKG G G RG GP+G+ G
Sbjct: 2532 RGAKGDMGERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPGA 2591
Query: 183 PGIP 186
GIP
Sbjct: 2592 AGIP 2595
Score = 65.5 bits (158), Expect = 6e-11
Identities = 32/69 (46%), Positives = 36/69 (52%)
Query: 118 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 177
G G GPPG GPPG G+ G G G G G GE G+KGD GP G+ G G
Sbjct: 1595 GPIGLTGRAGPPGDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKA 1654
Query: 178 GEKGYPGIP 186
GE+G G P
Sbjct: 1655 GERGLRGAP 1663
Score = 65.5 bits (158), Expect = 6e-11
Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 19/106 (17%)
Query: 100 GQSPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEK 159
G+ + G P G RG +G PG GP G G+ G+ G +G G G+ G K
Sbjct: 1634 GEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPK 1693
Query: 160 GDKGDLGP-------------------RGERGQHGPKGEKGYPGIP 186
GD+G+ GP G+RGQ GP+G KG PG+P
Sbjct: 1694 GDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLP 1739
Score = 65.5 bits (158), Expect = 6e-11
Identities = 34/72 (47%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 124 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQ------HGPK 177
G +G GPPG PG+PG G G GA G G GEKGD+GD G G G G +
Sbjct: 1637 GEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDR 1696
Query: 178 GEKGYPGIPPEL 189
GE G PG P L
Sbjct: 1697 GEPGPPGPPGRL 1708
Score = 65.5 bits (158), Expect = 6e-11
Identities = 34/75 (45%), Positives = 38/75 (50%), Gaps = 12/75 (16%)
Query: 124 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAK------------GEKGDKGDLGPRGER 171
G G PG PG G+PG G G+ G G G K GEKGDKG+ GP G
Sbjct: 2593 GIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPPGRP 2652
Query: 172 GQHGPKGEKGYPGIP 186
G G KGE G PG+P
Sbjct: 2653 GLAGHKGEMGEPGVP 2667
Score = 64.7 bits (156), Expect = 1e-10
Identities = 29/59 (49%), Positives = 35/59 (59%)
Query: 127 GPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYPGI 185
G PG PG PG PG G G GA G +G +G G G+ G +GERG GP G +G PG+
Sbjct: 1453 GAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPPGPAGSRGLPGV 1511
Score = 64.7 bits (156), Expect = 1e-10
Identities = 33/70 (47%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 124 GYQGPPGPPGP---------PGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQH 174
G G PGPPGP PG+PG G G GA G +GA G+ GD+G G G G
Sbjct: 2224 GAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLP 2283
Query: 175 GPKGEKGYPG 184
GP G KG PG
Sbjct: 2284 GPVGPKGEPG 2293
Score = 64.3 bits (155), Expect = 1e-10
Identities = 39/114 (34%), Positives = 48/114 (42%), Gaps = 27/114 (23%)
Query: 103 PQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGE---- 158
P+ P C K G+ G +G GPPG PG+PG G G G G AKGE
Sbjct: 1242 PRPEPCPVYCPKGQKGEPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFP 1301
Query: 159 -----------------------KGDKGDLGPRGERGQHGPKGEKGYPGIPPEL 189
KG G GPRG+ G+ GP+G KG PG P ++
Sbjct: 1302 GADGRPGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQV 1355
Score = 63.9 bits (154), Expect = 2e-10
Identities = 28/69 (40%), Positives = 36/69 (52%)
Query: 118 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 177
G+ G++GPPGP G PG+ G G G+ G G +G G G G GP G G G
Sbjct: 1743 GERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAGKA 1802
Query: 178 GEKGYPGIP 186
G+ G G+P
Sbjct: 1803 GDPGRDGLP 1811
Score = 63.9 bits (154), Expect = 2e-10
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 118 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 177
G G G PG PG G G G++G +G G +G KGE+G G LGP+G G GP
Sbjct: 1836 GKPGLNGKNGEPGDPGEDGRKGEKGDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPV 1895
Query: 178 GE--KGYPGIP 186
G +G+PG+P
Sbjct: 1896 GPPGQGFPGVP 1906
Score = 63.9 bits (154), Expect = 2e-10
Identities = 34/82 (41%), Positives = 40/82 (48%)
Query: 103 PQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDK 162
P T G P D G G GPPG G G G+NG+ G G G G KGD+
Sbjct: 2081 PGTPGPPGPPGPKVSVDEPGPGLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDR 2140
Query: 163 GDLGPRGERGQHGPKGEKGYPG 184
G+ GPRG+ G G GE+G G
Sbjct: 2141 GEPGPRGQDGNPGLPGERGMAG 2162
Score = 63.2 bits (152), Expect = 3e-10
Identities = 35/85 (41%), Positives = 43/85 (50%), Gaps = 14/85 (16%)
Query: 118 GDYSFRGYQGPPGP------PGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGD------- 164
G+ +G +GPPGP PG G PG G G G TG +G KGE G GD
Sbjct: 1489 GEAGEKGERGPPGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVGPA 1548
Query: 165 -LGPRGERGQHGPKGEKGYPGIPPE 188
GP+GE+G GP G +G G+ E
Sbjct: 1549 VAGPKGEKGDVGPAGPRGATGVQGE 1573
Score = 63.2 bits (152), Expect = 3e-10
Identities = 33/72 (45%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 118 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGD----LGPRGERGQ 173
G+ RG G PG GP G+ G G+ G G G G+ G KGDKGD LGP G RG
Sbjct: 2475 GEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGA 2534
Query: 174 HGPKGEKGYPGI 185
G GE+G G+
Sbjct: 2535 KGDMGERGPRGL 2546
Score = 63.2 bits (152), Expect = 3e-10
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 123 RGYQGPPGPPGPPGIPGNHGNNGN------NGATGHEGAKGEKGDKGDLGPRGERGQHGP 176
+G +G GPPG PG+ G+ G G +GA G EG G KGD+G G G +G G
Sbjct: 2640 KGDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGE 2699
Query: 177 KGEKGYPGI 185
KGE+G PGI
Sbjct: 2700 KGERGTPGI 2708
Score = 62.0 bits (149), Expect = 7e-10
Identities = 30/67 (44%), Positives = 36/67 (53%)
Query: 118 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 177
GD F G GP G G G G G G G +G++G+ G G G +GPRG G G K
Sbjct: 2683 GDRGFDGQPGPKGDQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQK 2742
Query: 178 GEKGYPG 184
GE+G PG
Sbjct: 2743 GERGPPG 2749
Score = 61.6 bits (148), Expect = 9e-10
Identities = 29/69 (42%), Positives = 37/69 (53%)
Query: 118 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 177
G+ RG +GP GP G PG+PG G G G G G +G+ G +G G +G+RG G
Sbjct: 1719 GEPGDRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLD 1778
Query: 178 GEKGYPGIP 186
G G G P
Sbjct: 1779 GRSGLDGKP 1787
Score = 61.2 bits (147), Expect = 1e-09
Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 123 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 182
RG G GP GPPG+PG G G G G G G KGD+G+ G +GE+G G +G +G
Sbjct: 1877 RGAPGILGPQGPPGLPGPVGPPGQ-GFPGVPGGTGPKGDRGETGSKGEQGLPGERGLRGE 1935
Query: 183 PGIPPEL 189
PG P +
Sbjct: 1936 PGSVPNV 1942
Score = 61.2 bits (147), Expect = 1e-09
Identities = 34/65 (52%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 124 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYP 183
G +G GPPG GIPG G G G+ G GA G KGDKGD G G GP+GE+G P
Sbjct: 2422 GERGLAGPPGREGIPGPLGPPGPPGSVGPPGASGLKGDKGDPGV----GLPGPRGERGEP 2477
Query: 184 GIPPE 188
GI E
Sbjct: 2478 GIRGE 2482
Score = 60.8 bits (146), Expect = 2e-09
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 100 GQSPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEK 159
G + G + P + G +G QG G G PGI G G +GN+G+ G G G
Sbjct: 2671 GAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSV 2730
Query: 160 GDKGDLGPRGERGQHGPKGEK--GYPGIP 186
G +G G +G++G+ GP GE+ G PG+P
Sbjct: 2731 GPRGPEGLQGQKGERGPPGERVVGAPGVP 2759
Score = 60.5 bits (145), Expect = 2e-09
Identities = 32/77 (41%), Positives = 38/77 (49%), Gaps = 14/77 (18%)
Query: 124 GYQGPPGPPGP--------------PGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRG 169
G QGP GPPG PG PG+ G G G G G KG++G G LG G
Sbjct: 1433 GPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAG 1492
Query: 170 ERGQHGPKGEKGYPGIP 186
E+G+ GP G G G+P
Sbjct: 1493 EKGERGPPGPAGSRGLP 1509
Score = 60.5 bits (145), Expect = 2e-09
Identities = 28/63 (44%), Positives = 37/63 (58%)
Query: 124 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYP 183
G +G PG GP G+ G G G++G G +G G G G +GPRG G+ G KG++G P
Sbjct: 1586 GPKGDPGDRGPIGLTGRAGPPGDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPP 1645
Query: 184 GIP 186
G P
Sbjct: 1646 GDP 1648
Score = 60.5 bits (145), Expect = 2e-09
Identities = 40/126 (31%), Positives = 53/126 (42%), Gaps = 23/126 (18%)
Query: 83 ELPHPEVDDLAQITTFWGQSPQTG--GLP-PDCSKCCHGDYSFRGYQGPPGPPGPPG--- 136
+L P + + F GQ+ G G P P + G G GP GPPGPPG
Sbjct: 2390 DLGLPGLPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGIPGPLGPPGPPGSVG 2449
Query: 137 -----------------IPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGE 179
+PG G G G G +G G++G +G GP G RG+ G KG+
Sbjct: 2450 PPGASGLKGDKGDPGVGLPGPRGERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGD 2509
Query: 180 KGYPGI 185
G G+
Sbjct: 2510 VGSAGL 2515
Score = 60.1 bits (144), Expect = 3e-09
Identities = 30/72 (41%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 118 GDYSFRGYQGPPGPP----GPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQ 173
GD G +G G GPPG G G+ G G G +G KG +GD GD G +G +G+
Sbjct: 2508 GDVGSAGLKGDKGDSAVILGPPGPRGAKGDMGERGPRGLDGDKGPRGDNGDPGDKGSKGE 2567
Query: 174 HGPKGEKGYPGI 185
G KG G PG+
Sbjct: 2568 PGDKGSAGLPGL 2579
Score = 59.3 bits (142), Expect = 4e-09
Identities = 43/121 (35%), Positives = 51/121 (42%), Gaps = 35/121 (28%)
Query: 100 GQSPQTGGLPPDCSKCCHGDYSFRGYQGP---------PGPPGP------PGI---PGNH 141
GQ G P G RG+ GP GPPGP PG+ PG
Sbjct: 1459 GQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAK 1518
Query: 142 GNNGNNGATGHEGAKGE-----------------KGDKGDLGPRGERGQHGPKGEKGYPG 184
G G G TG +G KGE KG+KGD+GP G RG G +GE+G PG
Sbjct: 1519 GPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQGERGPPG 1578
Query: 185 I 185
+
Sbjct: 1579 L 1579
Score = 58.9 bits (141), Expect = 6e-09
Identities = 32/87 (36%), Positives = 42/87 (48%)
Query: 100 GQSPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEK 159
G++ G P S G+ F G G PG PG G PG G G G+ G G +G+
Sbjct: 1278 GRTGAPGPQGPPGSATAKGERGFPGADGRPGSPGRAGNPGTPGAPGLKGSPGLPGPRGDP 1337
Query: 160 GDKGDLGPRGERGQHGPKGEKGYPGIP 186
G++G GP+GE G G PG+P
Sbjct: 1338 GERGPRGPKGEPGAPGQVIGGEGPGLP 1364
Score = 58.5 bits (140), Expect = 7e-09
Identities = 30/70 (42%), Positives = 36/70 (51%)
Query: 117 HGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGP 176
+GD +G +G PG G G PG G +GN G G G G +G G GPRG G G
Sbjct: 2122 NGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPEGKPGLQGPRGPPGPVGG 2181
Query: 177 KGEKGYPGIP 186
G+ G PG P
Sbjct: 2182 HGDPGPPGAP 2191
Score = 58.5 bits (140), Expect = 7e-09
Identities = 33/66 (50%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 124 GYQGPPGPPGP---PGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEK 180
G QGP GPPGP G PG G G G G +G G KG+ G+ GP G RG GP G
Sbjct: 2168 GLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPG-RGLTGPTGAV 2226
Query: 181 GYPGIP 186
G PG P
Sbjct: 2227 GLPGPP 2232
Score = 58.2 bits (139), Expect = 1e-08
Identities = 36/89 (40%), Positives = 39/89 (43%), Gaps = 18/89 (20%)
Query: 118 GDYSFRGYQGPPGPP------------GPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDL 165
G FRG GP G P GPPG+ G G +G GA G G G G GD
Sbjct: 1746 GIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAGKAGDP 1805
Query: 166 GP------RGERGQHGPKGEKGYPGIPPE 188
G RGE+G GP G G PG P E
Sbjct: 1806 GRDGLPGLRGEQGLPGPSGPPGLPGKPGE 1834
Score = 58.2 bits (139), Expect = 1e-08
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 100 GQSPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNG--ATGHEGAKG 157
G++ + G D + GD G G PG PGP G G G G G G GAKG
Sbjct: 2251 GETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKG 2310
Query: 158 EKGDKGDL--------GPRGERGQHGPKGEKGYPG 184
EKG G L G +G+RG GP+GEKG G
Sbjct: 2311 EKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAG 2345
Score = 57.8 bits (138), Expect = 1e-08
Identities = 31/72 (43%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Query: 124 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGA---------KGEKGDKGDLGPRGERGQH 174
G +G PG PGP G PG G G G G G G KGD G GP G RG
Sbjct: 1323 GLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPGRKGDPGPSGPPGPRGPL 1382
Query: 175 GPKGEKGYPGIP 186
G G +G PG+P
Sbjct: 1383 GDPGPRGPPGLP 1394
Score = 57.8 bits (138), Expect = 1e-08
Identities = 38/95 (40%), Positives = 43/95 (45%), Gaps = 26/95 (27%)
Query: 118 GDYSFRGYQGPPGPPGPPGI------PGNHGNNGNNGATGHEGAKGEKGD---------- 161
GD RG +GP G PG PG PG G G+ G +G G +G GD
Sbjct: 1335 GDPGERGPRGPKGEPGAPGQVIGGEGPGLPGRKGDPGPSGPPGPRGPLGDPGPRGPPGLP 1394
Query: 162 ----KGDLGPRGERGQHGP------KGEKGYPGIP 186
KGD G RGERG GP GE G PG+P
Sbjct: 1395 GTAMKGDKGDRGERGPPGPGEGGIAPGEPGLPGLP 1429
Score = 57.8 bits (138), Expect = 1e-08
Identities = 34/87 (39%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 100 GQSPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGE- 158
G++ + G D K GD G +G GP G G PG G G G G G G+
Sbjct: 1842 GKNGEPGDPGEDGRKGEKGDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPPGQG 1901
Query: 159 -KGDKGDLGPRGERGQHGPKGEKGYPG 184
G G GP+G+RG+ G KGE+G PG
Sbjct: 1902 FPGVPGGTGPKGDRGETGSKGEQGLPG 1928
Score = 57.8 bits (138), Expect = 1e-08
Identities = 37/92 (40%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 100 GQSPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEK 159
G+ GGL D G+ +G +G PGP G G G G G+ G G +GA G K
Sbjct: 2310 GEKGAPGGLAGDLV----GEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPK 2365
Query: 160 GDKGD--LGPRGERGQHGP---KGEKGYPGIP 186
G KGD +G G G GP KG+ G PG+P
Sbjct: 2366 GFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLP 2397
Score = 57.4 bits (137), Expect = 2e-08
Identities = 29/67 (43%), Positives = 33/67 (49%)
Query: 118 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 177
GD G +GP G PG PG PG G G G G +G G +G G+ G RG G G
Sbjct: 1722 GDRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRS 1781
Query: 178 GEKGYPG 184
G G PG
Sbjct: 1782 GLDGKPG 1788
Score = 57.4 bits (137), Expect = 2e-08
Identities = 35/94 (37%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 92 LAQITTFWGQSPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATG 151
L +I W +S + P+ + GD G QGPPG GP G PG G G+ G G
Sbjct: 1956 LREIVETWDESSGSFLPVPERRRGPKGD---SGEQGPPGKEGPIGFPGERGLKGDRGDPG 2012
Query: 152 HEGAKG-EKGDKGDLGPRGERGQHGPKGEKGYPG 184
+G G G++G GP G G+ G G G PG
Sbjct: 2013 PQGPPGLALGERGPPGPSGLAGEPGKPGIPGLPG 2046
Score = 56.2 bits (134), Expect = 4e-08
Identities = 37/86 (43%), Positives = 41/86 (47%), Gaps = 25/86 (29%)
Query: 124 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEG--------AKGEKGD-------------- 161
G +G PG PG PG+PG G G G TG G AKGEKG
Sbjct: 2269 GDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGA 2328
Query: 162 KGDL---GPRGERGQHGPKGEKGYPG 184
KGD GPRGE+G+ G GE G PG
Sbjct: 2329 KGDRGLPGPRGEKGEAGRAGEPGDPG 2354
Score = 55.8 bits (133), Expect = 5e-08
Identities = 29/64 (45%), Positives = 33/64 (51%)
Query: 123 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 182
+G +G PGP G G G G G G+ G G G G KG GP G G+ G KGE G
Sbjct: 1479 KGDRGFPGPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGR 1538
Query: 183 PGIP 186
PG P
Sbjct: 1539 PGDP 1542
Score = 55.8 bits (133), Expect = 5e-08
Identities = 29/67 (43%), Positives = 32/67 (47%)
Query: 118 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 177
GD G +G G PGP G GN G G G G EG G +G +G GP G G GP
Sbjct: 2129 GDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPEGKPGLQGPRGPPGPVGGHGDPGPP 2188
Query: 178 GEKGYPG 184
G G G
Sbjct: 2189 GAPGLAG 2195
Score = 55.5 bits (132), Expect = 6e-08
Identities = 34/86 (39%), Positives = 42/86 (48%), Gaps = 14/86 (16%)
Query: 118 GDYSFRGYQGPPGP------PGPPGIPGNHGNNGNNGATGHEGAKGEKGD--KGDLGPRG 169
G +G +GPPGP PGPPG PG G G G +G +G GE G +G GP G
Sbjct: 2165 GKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLTGPTG 2224
Query: 170 ERGQHGPKGEKGY------PGIPPEL 189
G GP G G PG+P ++
Sbjct: 2225 AVGLPGPPGPSGLVGPQGSPGLPGQV 2250
Score = 55.5 bits (132), Expect = 6e-08
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 15/83 (18%)
Query: 117 HGDYSFRGYQGPPGPPGPPGIPGNH---------------GNNGNNGATGHEGAKGEKGD 161
+GD +G +G PG G G+PG G+ G+ G G G +GEKGD
Sbjct: 2556 NGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPGAAGIPGDPGSPGKDGVPGIRGEKGD 2615
Query: 162 KGDLGPRGERGQHGPKGEKGYPG 184
G +GPRG +G+ G KG G G
Sbjct: 2616 VGFMGPRGLKGERGVKGACGLDG 2638
Score = 55.5 bits (132), Expect = 6e-08
Identities = 30/71 (42%), Positives = 38/71 (53%)
Query: 118 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 177
GD G G G GP G PG G G+ G+ G +G G +G+KGD+G G RG G +
Sbjct: 2569 GDKGSAGLPGLRGLLGPQGQPGAAGIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGLKGER 2628
Query: 178 GEKGYPGIPPE 188
G KG G+ E
Sbjct: 2629 GVKGACGLDGE 2639
Score = 55.1 bits (131), Expect = 8e-08
Identities = 29/69 (42%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 123 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQH-------G 175
RG +G PG G G PG G G G G G +GEKGD G G +G++G G
Sbjct: 2471 RGERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPG 2530
Query: 176 PKGEKGYPG 184
P+G KG G
Sbjct: 2531 PRGAKGDMG 2539
Score = 54.7 bits (130), Expect = 1e-07
Identities = 33/84 (39%), Positives = 38/84 (45%), Gaps = 19/84 (22%)
Query: 118 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGA-------------KGEKGDKGD 164
G +G QG PG G G PG+ G G+ G G G KGE GD+G
Sbjct: 1667 GPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQ 1726
Query: 165 LGPRGERGQHGPKGEKGYPGIPPE 188
GPR GPKG+ G PG P E
Sbjct: 1727 EGPR------GPKGDPGLPGAPGE 1744
Score = 54.7 bits (130), Expect = 1e-07
Identities = 28/62 (45%), Positives = 33/62 (53%)
Query: 123 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 182
RG +G PG PG PG G G G G G G +G G+KGD GP G G+ G G+ G
Sbjct: 1730 RGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGA 1789
Query: 183 PG 184
G
Sbjct: 1790 AG 1791
Score = 54.7 bits (130), Expect = 1e-07
Identities = 28/67 (41%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 123 RGYQGPPGPPGPPGIPGNH---GNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGE 179
+G G PG PG G PG G G+ G G G KG++G+KG+ G G G GP G
Sbjct: 2658 KGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPGIGGFPGPSGN 2717
Query: 180 KGYPGIP 186
G G P
Sbjct: 2718 DGSAGPP 2724
Score = 54.7 bits (130), Expect = 1e-07
Identities = 29/66 (43%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 124 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEK-----GDKGDLGPRGERGQHGPKG 178
G G GPPGPPG G G G G G G GE+ G G G RGE+G+ GP G
Sbjct: 2716 GNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGERVVGAPGVPGAPGERGEQGRPGPAG 2775
Query: 179 EKGYPG 184
+G G
Sbjct: 2776 PRGEKG 2781
Score = 54.3 bits (129), Expect = 1e-07
Identities = 29/63 (46%), Positives = 31/63 (49%)
Query: 124 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYP 183
G G GP GPPG G G+ G G G G KGE+G G G RG G G G KG
Sbjct: 1462 GSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAKGPE 1521
Query: 184 GIP 186
G P
Sbjct: 1522 GPP 1524
Score = 54.3 bits (129), Expect = 1e-07
Identities = 33/92 (35%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Query: 100 GQSPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEK 159
G+ G P + G RG GP G G PG+PG G G G G +G +G
Sbjct: 2117 GEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPEGKPGLQGPRGPP 2176
Query: 160 ---GDKGDLGPRGERGQHGPKGEKGYPGIPPE 188
G GD GP G G GP G +G G+ E
Sbjct: 2177 GPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGE 2208
Score = 54.3 bits (129), Expect = 1e-07
Identities = 29/68 (42%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 124 GYQGPPGPPGPPGIPGNHGNNGN-----NGATGHEGAKGEKGDKGDLGPRGERGQHGPKG 178
G GP GP GP G+ G G G G TG G G G G +GP+G G G G
Sbjct: 2192 GLAGPAGPQGPSGLKGEPGETGPPGRGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVG 2251
Query: 179 EKGYPGIP 186
E G PG P
Sbjct: 2252 ETGKPGAP 2259
Score = 53.9 bits (128), Expect = 2e-07
Identities = 27/64 (42%), Positives = 33/64 (51%)
Query: 123 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 182
RG +G G G G G G G G GH+G GE G G G G+ G GPKG++G+
Sbjct: 2628 RGVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGF 2687
Query: 183 PGIP 186
G P
Sbjct: 2688 DGQP 2691
Score = 53.1 bits (126), Expect = 3e-07
Identities = 30/64 (46%), Positives = 33/64 (51%), Gaps = 10/64 (15%)
Query: 133 GPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPR-------GERGQHGPK---GEKGY 182
GP G G G G G G G +G KGD+GD GP+ GERG GP GE G
Sbjct: 1979 GPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGK 2038
Query: 183 PGIP 186
PGIP
Sbjct: 2039 PGIP 2042
Score = 53.1 bits (126), Expect = 3e-07
Identities = 32/78 (41%), Positives = 36/78 (46%), Gaps = 17/78 (21%)
Query: 124 GYQGPPGPPGP------PGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQ---- 173
G QG PG PG PG PG G +G +G G G G G G +GP+GE G
Sbjct: 2239 GPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAP 2298
Query: 174 -------HGPKGEKGYPG 184
G KGEKG PG
Sbjct: 2299 GQAVVGLPGAKGEKGAPG 2316
Score = 52.4 bits (124), Expect = 5e-07
Identities = 38/105 (36%), Positives = 42/105 (40%), Gaps = 38/105 (36%)
Query: 118 GDYSFRGYQGPPGPPGPP---------------------------------GIPGNHGNN 144
G +G G PG PG P GIPG G
Sbjct: 2383 GPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGIPGPLGPP 2442
Query: 145 GNNGATGHEGAKGEKGDKGD-----LGPRGERGQHGPKGEKGYPG 184
G G+ G GA G KGDKGD GPRGERG+ G +GE G PG
Sbjct: 2443 GPPGSVGPPGASGLKGDKGDPGVGLPGPRGERGEPGIRGEDGRPG 2487
Score = 52.0 bits (123), Expect = 7e-07
Identities = 33/85 (38%), Positives = 39/85 (45%), Gaps = 19/85 (22%)
Query: 102 SPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPG------PPGIPGNHGNNGNNG-----AT 150
+P GG P G G GPPGPPG P G+ G G G G A
Sbjct: 2705 TPGIGGFP--------GPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGERVVGAP 2756
Query: 151 GHEGAKGEKGDKGDLGPRGERGQHG 175
G GA GE+G++G GP G RG+ G
Sbjct: 2757 GVPGAPGERGEQGRPGPAGPRGEKG 2781
Score = 51.6 bits (122), Expect = 9e-07
Identities = 29/71 (40%), Positives = 32/71 (45%)
Query: 118 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 177
G+ RG G PG PG G+ G G G G G G G GD G G G G GP+
Sbjct: 2141 GEPGPRGQDGNPGLPGERGMAGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQ 2200
Query: 178 GEKGYPGIPPE 188
G G G P E
Sbjct: 2201 GPSGLKGEPGE 2211
Score = 50.8 bits (120), Expect = 2e-06
Identities = 39/142 (27%), Positives = 51/142 (35%), Gaps = 53/142 (37%)
Query: 100 GQSPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGP--------PGIPGNHGNNGNNGATG 151
G S +G D K G G QGPPG PGP PG+PG G G+ G TG
Sbjct: 1860 GDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPPGQGFPGVPGGTGPKGDRGETG 1919
Query: 152 HEGAKGEKGDKG---------------------------------------------DLG 166
+G +G G++G G
Sbjct: 1920 SKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASALREIVETWDESSGSFLPVPERRRG 1979
Query: 167 PRGERGQHGPKGEKGYPGIPPE 188
P+G+ G+ GP G++G G P E
Sbjct: 1980 PKGDSGEQGPPGKEGPIGFPGE 2001
Score = 50.8 bits (120), Expect = 2e-06
Identities = 27/67 (40%), Positives = 31/67 (46%)
Query: 118 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 177
G+ G +G GP G PG+ G G G G G G G G G GP+G G G
Sbjct: 2150 GNPGLPGERGMAGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEP 2209
Query: 178 GEKGYPG 184
GE G PG
Sbjct: 2210 GETGPPG 2216
Score = 50.1 bits (118), Expect = 3e-06
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 123 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 182
+G +G PGPPGPPG + G +G G++G +G GP+G+ G G GE+G
Sbjct: 1693 KGDRGEPGPPGPPGRLVDTGPGARE-----KGEPGDRGQEGPRGPKGDPGLPGAPGERGI 1747
Query: 183 PGI--PP 187
G PP
Sbjct: 1748 EGFRGPP 1754
Score = 50.1 bits (118), Expect = 3e-06
Identities = 27/71 (38%), Positives = 34/71 (47%)
Query: 118 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 177
G G +GP G G PG G+ G G+ G+ G G +G G +G G G G G
Sbjct: 2542 GPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPGAAGIPGDPGSP 2601
Query: 178 GEKGYPGIPPE 188
G+ G PGI E
Sbjct: 2602 GKDGVPGIRGE 2612
Score = 42.7 bits (99), Expect = 4e-04
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Query: 100 GQSPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGP-----PGIPGNHGNNGNNGATGHEG 154
G G P S G +G +G GPPG PG+PG G G G G G
Sbjct: 2716 GNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGERVVGAPGVPGAPGERGEQGRPGPAG 2775
Query: 155 AKGEKGD 161
+GEKG+
Sbjct: 2776 PRGEKGE 2782
>gi|5901944 elastin microfibril interfacer 1 [Homo sapiens]
Length = 1016
Score = 78.6 bits (192), Expect = 7e-15
Identities = 67/212 (31%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 121 SFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEK 180
S + GP G GPPG P G G G G G+ G+ G +G +GP GP+GE+
Sbjct: 808 SLKDLTGPAGEAGPPGPP---GLQGPPGPAGPPGSPGKDGQEGPIGP------PGPQGEQ 858
Query: 181 GYPGIP--PELQIAFMASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFF 238
G G P P Q+AF A+L+ S + + F V N G ++D TG F AP++G Y
Sbjct: 859 GVEGAPAAPVPQVAFSAALSLPRSEPGT-VPFDRVLLNDGGYYDPETGVFTAPLAGRYLL 917
Query: 239 TFSMM--KHEDVEEVYVYLMHNGNTVFSMYSYEMKG-------KSDTSSN-----HAVLK 284
+ + +HE VE V + + G YE +G +S S +L
Sbjct: 918 SAVLTGHRHEKVEAV-LSRSNQGVARVDSGGYEPEGLENKPVAESQPSPGTLGVFSLILP 976
Query: 285 LAKGDEVWLRMGNGALHGDHQRFSTFAGFLLF 316
L GD V + + G L + + F+G LL+
Sbjct: 977 LQAGDTVCVDLVMGQLAHSEEPLTIFSGALLY 1008
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.137 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,482,760
Number of Sequences: 37866
Number of extensions: 897985
Number of successful extensions: 27294
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 4489
Number of HSP's gapped (non-prelim): 7762
length of query: 319
length of database: 18,247,518
effective HSP length: 102
effective length of query: 217
effective length of database: 14,385,186
effective search space: 3121585362
effective search space used: 3121585362
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.