CAPRIN2 15960

Name: CAPRIN2	Sequence: fasta or formatted (1077aa)		NCBI GI: 23503235
Description: C1q domain containing 1 isoform 2		Referenced in: Complement
Other entries for this name: alt prot [793aa] C1q domain containing 1 isoform 3 alt prot [1127aa] C1q domain containing 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.8 52 2 C cysteine 1.0 11 1 D aspartate 3.7 40 1 E glutamate 8.3 89 3 F phenylalanine 3.2 35 1 G glycine 4.9 53 2 H histidine 1.9 20 1 I isoleucine 2.5 27 1 K lysine 7.5 81 3 L leucine 9.0 97 3 M methionine 1.7 18 1 N asparagine 4.5 49 2 P proline 7.7 83 4 Q glutamine 8.2 88 2 R arginine 3.6 39 2 S serine 11.8 127 3 T threonine 5.8 62 2 V valine 5.3 57 2 W tryptophan 1.4 15 1 Y tyrosine 3.2 34 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 C1q domain containing 1 isoform 2 CAPRIN2 0.987 C1q domain containing 1 isoform 1 CAPRIN2 0.685 C1q domain containing 1 isoform 3 CAPRIN1 0.092 membrane component chromosome 11 surface marker 1 is... CAPRIN1 0.092 membrane component chromosome 11 surface marker 1 is... C1QTNF3 0.037 C1q and tumor necrosis factor related protein 3 isof... C1QTNF3 0.037 C1q and tumor necrosis factor related protein 3 isof... CBLN1 0.035 cerebellin 1 precursor CBLN2 0.032 cerebellin 2 precursor CBLN4 0.031 cerebellin 4 precursor CBLN3 0.031 cerebellin 3 precursor C1QTNF4 0.029 C1q and tumor necrosis factor related protein 4 [Ho... C1QL1 0.029 complement component 1, q subcomponent-like 1 C1QL4 0.029 complement component 1, q subcomponent-like 4 C1QL2 0.028 complement component 1, q subcomponent-like 2 [Homo... C1QL3 0.027 complement component 1, q subcomponent-like 3 C1QTNF5 0.022 C1q and tumor necrosis factor related protein 5 prec... C1QTNF2 0.021 C1q and tumor necrosis factor related protein 2 [Hom... LOC283685 0.021 PREDICTED: golgi autoantigen, golgin subfamily a-li... COL8A1 0.020 alpha 1 type VIII collagen precursor COL8A1 0.020 alpha 1 type VIII collagen precursor LOC283685 0.019 PREDICTED: golgi autoantigen, golgin subfamily a-li... ADIPOQ 0.018 adiponectin precursor C1QB 0.018 complement component 1, q subcomponent, B chain prec... COL10A1 0.018 type X collagen alpha 1 precursor LOC727832 0.018 golgi autoantigen, golgin subfamily a-like COL8A2 0.018 collagen, type VIII, alpha 2 C1QTNF1 0.017 C1q and tumor necrosis factor related protein 1 isof... C1QTNF1 0.017 C1q and tumor necrosis factor related protein 1 [Hom... C1QTNF1 0.017 C1q and tumor necrosis factor related protein 1 isof... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.