Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 13569919
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13569919 C1q and tumor necrosis factor related protein 3
isoform a [Homo sapiens]
(246 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13569919 C1q and tumor necrosis factor related protein 3 isof... 531 e-151
gi|62739183 C1q and tumor necrosis factor related protein 3 isof... 469 e-133
gi|94818738 C1q and tumor necrosis factor related protein 2 [Hom... 110 9e-25
gi|58801559 complement component 1, q subcomponent-like 3 [Homo ... 109 2e-24
gi|154937344 complement component 1, q subcomponent-like 2 [Homo... 109 2e-24
gi|4757760 adiponectin precursor [Homo sapiens] 108 3e-24
gi|5729785 complement component 1, q subcomponent-like 1 [Homo s... 108 4e-24
gi|13994280 C1q and tumor necrosis factor related protein 7 isof... 107 7e-24
gi|206597454 C1q and tumor necrosis factor related protein 7 iso... 107 7e-24
gi|206597452 C1q and tumor necrosis factor related protein 7 iso... 107 7e-24
gi|56606142 complement component 1, q subcomponent-like 4 [Homo ... 107 9e-24
gi|50428933 C1q domain containing 1 isoform 1 [Homo sapiens] 105 3e-23
gi|50428931 C1q domain containing 1 isoform 3 [Homo sapiens] 105 3e-23
gi|23503235 C1q domain containing 1 isoform 2 [Homo sapiens] 105 3e-23
gi|65301115 C1q and tumor necrosis factor related protein 9 [Hom... 105 5e-23
gi|56847616 C1q and tumor necrosis factor related protein 9B [Ho... 102 2e-22
gi|32967300 C1q and tumor necrosis factor related protein 6 [Hom... 100 9e-22
gi|32967294 C1q and tumor necrosis factor related protein 6 [Hom... 100 9e-22
gi|14149712 C1q and tumor necrosis factor related protein 5 prec... 100 2e-21
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] 97 1e-20
gi|56786155 complement component 1, q subcomponent, C chain prec... 94 1e-19
gi|166235903 complement component 1, q subcomponent, C chain pre... 94 1e-19
gi|87298828 complement component 1, q subcomponent, B chain prec... 92 3e-19
gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens] 91 9e-19
gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens] 91 9e-19
gi|122937273 hypothetical protein LOC131149 [Homo sapiens] 89 3e-18
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] 88 6e-18
gi|7705753 complement component 1, q subcomponent, A chain precu... 85 7e-17
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 80 2e-15
gi|38372917 C1q and tumor necrosis factor related protein 1 isof... 79 4e-15
>gi|13569919 C1q and tumor necrosis factor related protein 3 isoform
a [Homo sapiens]
Length = 246
Score = 531 bits (1367), Expect = e-151
Identities = 246/246 (100%), Positives = 246/246 (100%)
Query: 1 MLWRQLIYWQLLALFFLPFCLCQDEYMESPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPG 60
MLWRQLIYWQLLALFFLPFCLCQDEYMESPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPG
Sbjct: 1 MLWRQLIYWQLLALFFLPFCLCQDEYMESPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPG 60
Query: 61 PPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYPGIPPELQIAF 120
PPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYPGIPPELQIAF
Sbjct: 61 PPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYPGIPPELQIAF 120
Query: 121 MASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYV 180
MASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYV
Sbjct: 121 MASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYV 180
Query: 181 YLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMGNGALHGDHQRFSTFAGF 240
YLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMGNGALHGDHQRFSTFAGF
Sbjct: 181 YLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMGNGALHGDHQRFSTFAGF 240
Query: 241 LLFETK 246
LLFETK
Sbjct: 241 LLFETK 246
>gi|62739183 C1q and tumor necrosis factor related protein 3 isoform
b [Homo sapiens]
Length = 319
Score = 469 bits (1208), Expect = e-133
Identities = 218/219 (99%), Positives = 219/219 (100%)
Query: 28 ESPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKG 87
+SPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKG
Sbjct: 101 QSPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKG 160
Query: 88 DKGDLGPRGERGQHGPKGEKGYPGIPPELQIAFMASLATHFSNQNSGIIFSSVETNIGNF 147
DKGDLGPRGERGQHGPKGEKGYPGIPPELQIAFMASLATHFSNQNSGIIFSSVETNIGNF
Sbjct: 161 DKGDLGPRGERGQHGPKGEKGYPGIPPELQIAFMASLATHFSNQNSGIIFSSVETNIGNF 220
Query: 148 FDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNH 207
FDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNH
Sbjct: 221 FDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNH 280
Query: 208 AVLKLAKGDEVWLRMGNGALHGDHQRFSTFAGFLLFETK 246
AVLKLAKGDEVWLRMGNGALHGDHQRFSTFAGFLLFETK
Sbjct: 281 AVLKLAKGDEVWLRMGNGALHGDHQRFSTFAGFLLFETK 319
>gi|94818738 C1q and tumor necrosis factor related protein 2 [Homo
sapiens]
Length = 330
Score = 110 bits (276), Expect = 9e-25
Identities = 66/205 (32%), Positives = 98/205 (47%), Gaps = 14/205 (6%)
Query: 50 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 109
RG G GPPG G G G G GA G G +G KG G G G G+ GPKG+KG
Sbjct: 120 RGDSGEEGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGE 179
Query: 110 PGIP-------PELQIAFMASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGV 162
PG+P + AF ++ + + I F + N G ++ +G+F V G+
Sbjct: 180 PGLPGPCSCGSGHTKSAFSVAVTKSYPRERLPIKFDKILMNEGGHYNASSGKFVCGVPGI 239
Query: 163 YFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRM 222
Y+FT+ + + + + L+HNG + G D +S +L L +GDEVWL++
Sbjct: 240 YYFTYDITLAN--KHLAIGLVHNGQYRIRTFDAN-TGNHDVASGSTILALKQGDEVWLQI 296
Query: 223 ----GNGALHGDHQRFSTFAGFLLF 243
NG + + S F GFL++
Sbjct: 297 FYSEQNGLFYDPYWTDSLFTGFLIY 321
>gi|58801559 complement component 1, q subcomponent-like 3 [Homo
sapiens]
Length = 255
Score = 109 bits (273), Expect = 2e-24
Identities = 68/199 (34%), Positives = 100/199 (50%), Gaps = 17/199 (8%)
Query: 61 PPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYPGIPPELQIAF 120
P I G G G G G G GE G G +GP GE+G+ G +G G PG P L A
Sbjct: 56 PTFIQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPG-APGLNAAG 114
Query: 121 MASLATH-----------FSNQNSG---IIFSSVETNIGNFFDVMTGRFGAPVSGVYFFT 166
S AT+ Q+ G + F V TN+GN +D TG+F + G+YFFT
Sbjct: 115 AISAATYSTVPKIAFYAGLKRQHEGYEVLKFDDVVTNLGNHYDPTTGKFTCSIPGIYFFT 174
Query: 167 FS-MMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMGNG 225
+ +M+ D ++ L N S + + D +SN VL L GDEV++++ G
Sbjct: 175 YHVLMRGGDGTSMWADLCKNNQVRASAIAQDADQNYDYASNSVVLHLEPGDEVYIKLDGG 234
Query: 226 ALH-GDHQRFSTFAGFLLF 243
H G++ ++STF+GF+++
Sbjct: 235 KAHGGNNNKYSTFSGFIIY 253
>gi|154937344 complement component 1, q subcomponent-like 2 [Homo
sapiens]
Length = 287
Score = 109 bits (272), Expect = 2e-24
Identities = 71/211 (33%), Positives = 101/211 (47%), Gaps = 20/211 (9%)
Query: 53 QGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY--- 109
QGP G PG PG PG G G G G G GEKGD G G G + G G
Sbjct: 75 QGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVGG 134
Query: 110 -PGIPPELQIAFMASLATHFSNQNSG--------------IIFSSVETNIGNFFDVMTGR 154
G+ + + ++L+ FS + F V TN+GN +D TG+
Sbjct: 135 GAGVGGDSEGEVTSALSATFSGPKIAFYVGLKSPHEGYEVLKFDDVVTNLGNHYDPTTGK 194
Query: 155 FGAPVSGVYFFTFS-MMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLA 213
F V G+YFFT+ +M+ D ++ L NG S + + D +SN VL L
Sbjct: 195 FSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVVLHLD 254
Query: 214 KGDEVWLRMGNGALH-GDHQRFSTFAGFLLF 243
GDEV++++ G H G++ ++STF+GFLL+
Sbjct: 255 SGDEVYVKLDGGKAHGGNNNKYSTFSGFLLY 285
>gi|4757760 adiponectin precursor [Homo sapiens]
Length = 244
Score = 108 bits (271), Expect = 3e-24
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 19/201 (9%)
Query: 60 GPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPR---GERGQHGPKGEKGYPGI---- 112
G PG PG++G G +G G G KGEKGD G +GP+ GE G G +G +G+PGI
Sbjct: 42 GIPGHPGHNGAPGRDGRDGTPGEKGEKGDPGLIGPKGDIGETGVPGAEGPRGFPGIQGRK 101
Query: 113 --PPE----LQIAFMASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFT 166
P E + AF L T+ + N I F+ + N N +D TG+F + G+Y+F
Sbjct: 102 GEPGEGAYVYRSAFSVGLETYVTIPNMPIRFTKIFYNQQNHYDGSTGKFHCNIPGLYYFA 161
Query: 167 FSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRM-GNG 225
+ + + +++V V L + Y + D +S +L L GD+VWL++ G G
Sbjct: 162 YHITVY--MKDVKVSLFKKDKAMLFTYDQYQENNVDQASGSVLLHLEVGDQVWLQVYGEG 219
Query: 226 ---ALHGDHQRFSTFAGFLLF 243
L+ D+ STF GFLL+
Sbjct: 220 ERNGLYADNDNDSTFTGFLLY 240
>gi|5729785 complement component 1, q subcomponent-like 1 [Homo
sapiens]
Length = 258
Score = 108 bits (270), Expect = 4e-24
Identities = 69/198 (34%), Positives = 101/198 (51%), Gaps = 14/198 (7%)
Query: 53 QGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRG--ERGQHGPKGEKGYP 110
QGP G PG G PG G G+ G G G GEKG+ G GP G G G Y
Sbjct: 66 QGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSGAISTATYT 125
Query: 111 GIPPELQIAFMASLATHFSNQNSG---IIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTF 167
+P ++AF A L N + G + F V TN+GN +D +G+F + G YFFT+
Sbjct: 126 TVP---RVAFYAGL----KNPHEGYEVLKFDDVVTNLGNNYDAASGKFTCNIPGTYFFTY 178
Query: 168 S-MMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMGNGA 226
+M+ D ++ L NG S + + D +SN +L L GDEV++++ G
Sbjct: 179 HVLMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVILHLDAGDEVFIKLDGGK 238
Query: 227 LH-GDHQRFSTFAGFLLF 243
H G+ ++STF+GF+++
Sbjct: 239 AHGGNSNKYSTFSGFIIY 256
>gi|13994280 C1q and tumor necrosis factor related protein 7 isoform
b [Homo sapiens]
Length = 289
Score = 107 bits (268), Expect = 7e-24
Identities = 77/243 (31%), Positives = 107/243 (44%), Gaps = 50/243 (20%)
Query: 48 SFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEK--------------------- 86
S G GPPGPPG G PG HG G G G +G KGEK
Sbjct: 35 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 94
Query: 87 GD------KGDLGPRGERGQHGP---------KGEKGYPGIPP-------ELQIAFMASL 124
GD KG +GP GE+G+ GP +GE+G PG+P L+ AF +
Sbjct: 95 GDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGI 154
Query: 125 ATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMH 184
T + + IIF+ V N G ++ TG+F G+Y+F++ + + + + L+H
Sbjct: 155 TTSYPEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLAN--KHLAIGLVH 212
Query: 185 NGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRM----GNGALHGDHQRFSTFAGF 240
NG + G D +S V+ L DEVWL + NG S F+GF
Sbjct: 213 NGQYRIKTFDAN-TGNHDVASGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGF 271
Query: 241 LLF 243
LL+
Sbjct: 272 LLY 274
>gi|206597454 C1q and tumor necrosis factor related protein 7
isoform b [Homo sapiens]
Length = 289
Score = 107 bits (268), Expect = 7e-24
Identities = 77/243 (31%), Positives = 107/243 (44%), Gaps = 50/243 (20%)
Query: 48 SFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEK--------------------- 86
S G GPPGPPG G PG HG G G G +G KGEK
Sbjct: 35 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 94
Query: 87 GD------KGDLGPRGERGQHGP---------KGEKGYPGIPP-------ELQIAFMASL 124
GD KG +GP GE+G+ GP +GE+G PG+P L+ AF +
Sbjct: 95 GDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGI 154
Query: 125 ATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMH 184
T + + IIF+ V N G ++ TG+F G+Y+F++ + + + + L+H
Sbjct: 155 TTSYPEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLAN--KHLAIGLVH 212
Query: 185 NGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRM----GNGALHGDHQRFSTFAGF 240
NG + G D +S V+ L DEVWL + NG S F+GF
Sbjct: 213 NGQYRIKTFDAN-TGNHDVASGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGF 271
Query: 241 LLF 243
LL+
Sbjct: 272 LLY 274
>gi|206597452 C1q and tumor necrosis factor related protein 7
isoform a [Homo sapiens]
Length = 296
Score = 107 bits (268), Expect = 7e-24
Identities = 77/243 (31%), Positives = 107/243 (44%), Gaps = 50/243 (20%)
Query: 48 SFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEK--------------------- 86
S G GPPGPPG G PG HG G G G +G KGEK
Sbjct: 42 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
Query: 87 GD------KGDLGPRGERGQHGP---------KGEKGYPGIPP-------ELQIAFMASL 124
GD KG +GP GE+G+ GP +GE+G PG+P L+ AF +
Sbjct: 102 GDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGI 161
Query: 125 ATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMH 184
T + + IIF+ V N G ++ TG+F G+Y+F++ + + + + L+H
Sbjct: 162 TTSYPEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLAN--KHLAIGLVH 219
Query: 185 NGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRM----GNGALHGDHQRFSTFAGF 240
NG + G D +S V+ L DEVWL + NG S F+GF
Sbjct: 220 NGQYRIKTFDAN-TGNHDVASGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGF 278
Query: 241 LLF 243
LL+
Sbjct: 279 LLY 281
>gi|56606142 complement component 1, q subcomponent-like 4 [Homo
sapiens]
Length = 238
Score = 107 bits (267), Expect = 9e-24
Identities = 68/201 (33%), Positives = 100/201 (49%), Gaps = 16/201 (7%)
Query: 54 GPPG-----PPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKG 108
GP G PP PPG G G G G G G G +G G+ G G G GP G
Sbjct: 41 GPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPGP----G 96
Query: 109 YPGIPPEL----QIAFMASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYF 164
G+ P +IAF A L + F V TN+GN ++ +G+F P+ GVYF
Sbjct: 97 PGGVAPAAGYVPRIAFYAGLRRPHEGYEV-LRFDDVVTNVGNAYEAASGKFTCPMPGVYF 155
Query: 165 FTFS-MMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMG 223
F + +M+ D ++ LM NG S + + D +SN +L L GDEV++++
Sbjct: 156 FAYHVLMRGGDGTSMWADLMKNGQVRASAIAQDADQNYDYASNSVILHLDVGDEVFIKLD 215
Query: 224 NGALHGDH-QRFSTFAGFLLF 243
G +HG + ++STF+GF+++
Sbjct: 216 GGKVHGGNTNKYSTFSGFIIY 236
>gi|50428933 C1q domain containing 1 isoform 1 [Homo sapiens]
Length = 1127
Score = 105 bits (263), Expect = 3e-23
Identities = 51/138 (36%), Positives = 87/138 (63%), Gaps = 3/138 (2%)
Query: 109 YPGIPPELQIAFMASLATHFS--NQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFT 166
YP +P ++++AF A+ ++ + + I+F + N+G FD+ GRF PV+G Y F
Sbjct: 990 YP-LPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFI 1048
Query: 167 FSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMGNGA 226
F M+K +YV LM N + S Y+ + +T+SNHA+L+L +GD++WLR+ GA
Sbjct: 1049 FHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGA 1108
Query: 227 LHGDHQRFSTFAGFLLFE 244
++G ++STF+G+LL++
Sbjct: 1109 IYGSSWKYSTFSGYLLYQ 1126
>gi|50428931 C1q domain containing 1 isoform 3 [Homo sapiens]
Length = 793
Score = 105 bits (263), Expect = 3e-23
Identities = 51/138 (36%), Positives = 87/138 (63%), Gaps = 3/138 (2%)
Query: 109 YPGIPPELQIAFMASLATHFS--NQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFT 166
YP +P ++++AF A+ ++ + + I+F + N+G FD+ GRF PV+G Y F
Sbjct: 656 YP-LPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFI 714
Query: 167 FSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMGNGA 226
F M+K +YV LM N + S Y+ + +T+SNHA+L+L +GD++WLR+ GA
Sbjct: 715 FHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGA 774
Query: 227 LHGDHQRFSTFAGFLLFE 244
++G ++STF+G+LL++
Sbjct: 775 IYGSSWKYSTFSGYLLYQ 792
>gi|23503235 C1q domain containing 1 isoform 2 [Homo sapiens]
Length = 1077
Score = 105 bits (263), Expect = 3e-23
Identities = 51/138 (36%), Positives = 87/138 (63%), Gaps = 3/138 (2%)
Query: 109 YPGIPPELQIAFMASLATHFS--NQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFT 166
YP +P ++++AF A+ ++ + + I+F + N+G FD+ GRF PV+G Y F
Sbjct: 940 YP-LPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFI 998
Query: 167 FSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMGNGA 226
F M+K +YV LM N + S Y+ + +T+SNHA+L+L +GD++WLR+ GA
Sbjct: 999 FHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGA 1058
Query: 227 LHGDHQRFSTFAGFLLFE 244
++G ++STF+G+LL++
Sbjct: 1059 IYGSSWKYSTFSGYLLYQ 1076
>gi|65301115 C1q and tumor necrosis factor related protein 9 [Homo
sapiens]
Length = 333
Score = 105 bits (261), Expect = 5e-23
Identities = 72/220 (32%), Positives = 102/220 (46%), Gaps = 10/220 (4%)
Query: 33 GGLPPDCSKCCHGDYSFRGYQGPPG---PPGPPGIPGNHGNNGNNGATGHEGAKGEKGDK 89
G P K GD G +GP G P GP G+PG G G G G G G +G+
Sbjct: 116 GETGPQGQKGNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEP 175
Query: 90 GDLGPRGERGQHGPKGEKGYPGIPPELQIAFMASLATHFSNQNSGIIFSSVETNIGNFFD 149
G G RG +G G KG+ G + P+ ++ + F + + I F + N N +D
Sbjct: 176 GVRGIRGWKGDRGEKGKIGETLVLPKSAFTVGLTVLSKFPSSDMPIKFDKILYNEFNHYD 235
Query: 150 VMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAV 209
G+F ++GVY+FT+ + V V L+ NG + M + D +S V
Sbjct: 236 TAAGKFTCHIAGVYYFTYHITVFS--RNVQVSLVKNGVKILHTKDAYMSSE-DQASGGIV 292
Query: 210 LKLAKGDEVWLRMGNG----ALHGDHQRFSTFAGFLLFET 245
L+L GDEVWL++ G L D +TF GFLLF +
Sbjct: 293 LQLKLGDEVWLQVTGGERFNGLFADEDDDTTFTGFLLFSS 332
Score = 62.8 bits (151), Expect = 3e-10
Identities = 30/62 (48%), Positives = 35/62 (56%)
Query: 50 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 109
+G +G G PG PG PG G +G G G +G KG KGD G RG G+HGPKG G
Sbjct: 49 KGDKGDAGEPGRPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGP 108
Query: 110 PG 111
G
Sbjct: 109 MG 110
Score = 62.0 bits (149), Expect = 5e-10
Identities = 29/52 (55%), Positives = 34/52 (65%)
Query: 60 GPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYPG 111
G PGIPGN G+NG G G +GAKG+KGD G+ G G G+ G GEKG G
Sbjct: 26 GHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPGKDGTSGEKGERG 77
>gi|56847616 C1q and tumor necrosis factor related protein 9B [Homo
sapiens]
Length = 333
Score = 102 bits (255), Expect = 2e-22
Identities = 70/221 (31%), Positives = 103/221 (46%), Gaps = 10/221 (4%)
Query: 33 GGLPPDCSKCCHGDYSFRGYQGPPG---PPGPPGIPGNHGNNGNNGATGHEGAKGEKGDK 89
G P K GD G +GP G P GP G+PG G G G G G G +G+
Sbjct: 116 GETGPQGQKGNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEP 175
Query: 90 GDLGPRGERGQHGPKGEKGYPGIPPELQIAFMASLATHFSNQNSGIIFSSVETNIGNFFD 149
G G RG +G G KG+ G + P+ ++ + F + + I F + N N +D
Sbjct: 176 GVRGIRGWKGDRGEKGKIGETLVLPKSAFTVGLTVLSKFPSSDVPIKFDKILYNEFNHYD 235
Query: 150 VMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAV 209
G+F ++GVY+FT+ + V V L+ NG + + + D +S V
Sbjct: 236 TAVGKFTCHIAGVYYFTYHITVFS--RNVQVSLVKNGVKILHTRDAYVSSE-DQASGSIV 292
Query: 210 LKLAKGDEVWLRMGNG----ALHGDHQRFSTFAGFLLFETK 246
L+L GDE+WL++ G L D +TF GFLLF ++
Sbjct: 293 LQLKLGDEMWLQVTGGERFNGLFADEDDDTTFTGFLLFSSQ 333
Score = 62.4 bits (150), Expect = 3e-10
Identities = 30/62 (48%), Positives = 35/62 (56%)
Query: 50 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 109
+G +G G PG PG PG G +G G G +G KG KGD G RG G+HGPKG G
Sbjct: 49 KGDKGDAGEPGCPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGP 108
Query: 110 PG 111
G
Sbjct: 109 MG 110
Score = 61.6 bits (148), Expect = 6e-10
Identities = 29/52 (55%), Positives = 34/52 (65%)
Query: 60 GPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYPG 111
G PGIPGN G+NG G G +GAKG+KGD G+ G G G+ G GEKG G
Sbjct: 26 GHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGCPGSPGKDGTSGEKGERG 77
>gi|32967300 C1q and tumor necrosis factor related protein 6 [Homo
sapiens]
Length = 278
Score = 100 bits (250), Expect = 9e-22
Identities = 76/268 (28%), Positives = 112/268 (41%), Gaps = 57/268 (21%)
Query: 9 WQLLALFFLPFCLCQDEYMESPQTGGLPPDCSKCC--------------------HGDYS 48
W L LF L +C+ +E + C +CC H
Sbjct: 29 WAALLLFLL---MCEIPMVELTFDRAVASGCQRCCDSEDPLDPAHVSSASSSGRPHALPE 85
Query: 49 FRGY------QGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHG 102
R Y +G G PGP G+PG G G G G +G+KG+
Sbjct: 86 IRPYINITILKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGD----------------- 128
Query: 103 PKGEKGYPGIPPELQ-IAFMA--SLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPV 159
KGE G PG P + + AF A H ++F V N+ FD+ TG+F AP+
Sbjct: 129 -KGEMGSPGAPCQKRFFAFSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMATGQFAAPL 187
Query: 160 SGVYFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVW 219
G+YFF+ ++ + +E YV++MHN +Y+ + +S S +L LA GD VW
Sbjct: 188 RGIYFFSLNVHSW-NYKETYVHIMHNQKEAVILYA-QPSERSIMQSQSVMLDLAYGDRVW 245
Query: 220 LRM-----GNGALHGDHQRFSTFAGFLL 242
+R+ N D + TF+G L+
Sbjct: 246 VRLFKRQRENAIYSNDFDTYITFSGHLI 273
>gi|32967294 C1q and tumor necrosis factor related protein 6 [Homo
sapiens]
Length = 278
Score = 100 bits (250), Expect = 9e-22
Identities = 76/268 (28%), Positives = 112/268 (41%), Gaps = 57/268 (21%)
Query: 9 WQLLALFFLPFCLCQDEYMESPQTGGLPPDCSKCC--------------------HGDYS 48
W L LF L +C+ +E + C +CC H
Sbjct: 29 WAALLLFLL---MCEIPMVELTFDRAVASGCQRCCDSEDPLDPAHVSSASSSGRPHALPE 85
Query: 49 FRGY------QGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHG 102
R Y +G G PGP G+PG G G G G +G+KG+
Sbjct: 86 IRPYINITILKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGD----------------- 128
Query: 103 PKGEKGYPGIPPELQ-IAFMA--SLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPV 159
KGE G PG P + + AF A H ++F V N+ FD+ TG+F AP+
Sbjct: 129 -KGEMGSPGAPCQKRFFAFSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMATGQFAAPL 187
Query: 160 SGVYFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVW 219
G+YFF+ ++ + +E YV++MHN +Y+ + +S S +L LA GD VW
Sbjct: 188 RGIYFFSLNVHSW-NYKETYVHIMHNQKEAVILYA-QPSERSIMQSQSVMLDLAYGDRVW 245
Query: 220 LRM-----GNGALHGDHQRFSTFAGFLL 242
+R+ N D + TF+G L+
Sbjct: 246 VRLFKRQRENAIYSNDFDTYITFSGHLI 273
>gi|14149712 C1q and tumor necrosis factor related protein 5
precursor [Homo sapiens]
Length = 243
Score = 100 bits (248), Expect = 2e-21
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 14/204 (6%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGE------KGDKGDLGPRGERGQHGPK 104
G G PG G G+PG G +G +GA G G KGE G +GD GPRGE G GP
Sbjct: 33 GLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPT 92
Query: 105 GEKGYPGIPPELQIAFMASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYF 164
G G +PP + S + ++ + F V N +D +TG+F V GVY+
Sbjct: 93 GPAGECSVPPRSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYY 152
Query: 165 FTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKG--KSDTSSNHAVLKLAKGDEVWLRM 222
F + + L+ NG ++ S + + G K + S A+++L D+VW+++
Sbjct: 153 FAVHATVYR--ASLQFDLVKNGESIASFFQF-FGGWPKPASLSGGAMVRLEPEDQVWVQV 209
Query: 223 GNG---ALHGDHQRFSTFAGFLLF 243
G G ++ + STF+GFL++
Sbjct: 210 GVGDYIGIYASIKTDSTFSGFLVY 233
>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
Length = 680
Score = 97.4 bits (241), Expect = 1e-20
Identities = 71/231 (30%), Positives = 98/231 (42%), Gaps = 41/231 (17%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEG--AKGEKGDKGDLGPRGERGQHGPKGEKG 108
G +GP GPPG PG PG+ G+ G+ G G G KG G G GP G RG G G G
Sbjct: 449 GTRGPIGPPGIPGFPGSKGDPGSPGPPGPAGIATKGLNGPTGPPGPPGPRGHSGEPGLPG 508
Query: 109 YPGIP------------------PELQ----------------IAFMASLATHFSNQNSG 134
PG P P L AF L+ + +
Sbjct: 509 PPGPPGPPGQAVMPEGFIKAGQRPSLSGTPLVSANQGVTGMPVSAFTVILSKAYPAIGTP 568
Query: 135 IIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYS 194
I F + N +D TG F + G+Y+F++ + H V+V L NG V Y
Sbjct: 569 IPFDKILYNRQQHYDPRTGIFTCQIPGIYYFSYHV--HVKGTHVWVGLYKNGTPVMYTYD 626
Query: 195 YEMKGKSDTSSNHAVLKLAKGDEVWLRMGN---GALHGDHQRFSTFAGFLL 242
KG D +S A++ L + D+VWL++ N L+ S+F+GFL+
Sbjct: 627 EYTKGYLDQASGSAIIDLTENDQVWLQLPNAESNGLYSSEYVHSSFSGFLV 677
Score = 68.2 bits (165), Expect = 6e-12
Identities = 32/68 (47%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 45 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 104
G+ G QGP GP GPPG+ G G NG G G KG++G G++GP G G GP
Sbjct: 200 GERGLPGPQGPTGPSGPPGV----GKRGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPP 255
Query: 105 GEKGYPGI 112
GE+G GI
Sbjct: 256 GERGPEGI 263
Score = 65.5 bits (158), Expect = 4e-11
Identities = 31/62 (50%), Positives = 36/62 (58%)
Query: 50 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 109
+G QGP G PG PG+ G GN G G G G+ G G KG+ GP G G G KGE+G
Sbjct: 322 KGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGS 381
Query: 110 PG 111
PG
Sbjct: 382 PG 383
Score = 63.9 bits (154), Expect = 1e-10
Identities = 31/63 (49%), Positives = 36/63 (57%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYP 110
G QGP G PG G+PG G G G G+ GAKGE+G G G G G+ G G KG P
Sbjct: 344 GPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSDGKPGYPGKPGLDGPKGNP 403
Query: 111 GIP 113
G+P
Sbjct: 404 GLP 406
Score = 62.8 bits (151), Expect = 3e-10
Identities = 33/69 (47%), Positives = 37/69 (53%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYP 110
G GPPG PGP G G G G+NG G GA G G +G +GP G G G KG+ G P
Sbjct: 413 GVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGAPGIPGTRGPIGPPGIPGFPGSKGDPGSP 472
Query: 111 GIPPELQIA 119
G P IA
Sbjct: 473 GPPGPAGIA 481
Score = 62.0 bits (149), Expect = 5e-10
Identities = 32/65 (49%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 47 YSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGE 106
Y G QG PG PGPPG P G G G G G +G G KGD+GP G G GP G
Sbjct: 85 YGSPGLQGEPGLPGPPG-PSAVGKPGVPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPGP 143
Query: 107 KGYPG 111
G PG
Sbjct: 144 PGIPG 148
Score = 61.2 bits (147), Expect = 8e-10
Identities = 32/63 (50%), Positives = 35/63 (55%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYP 110
G +G PG PGP G PG G G G G GAKG G G+ GPRG G G +G G P
Sbjct: 398 GPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGAPGIPGTRGPIGPP 457
Query: 111 GIP 113
GIP
Sbjct: 458 GIP 460
Score = 58.9 bits (141), Expect = 4e-09
Identities = 34/86 (39%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 31 QTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKG 90
+TG P G+ G G PG PG PG+ G GN G G G G G G G
Sbjct: 363 ETGPAGPAGYPGAKGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGVGGPPGLPG 422
Query: 91 DLGPRGERGQHGPKGE---KGYPGIP 113
+GP G +G G GE +G PGIP
Sbjct: 423 PVGPAGAKGMPGHNGEAGPRGAPGIP 448
Score = 58.2 bits (139), Expect = 7e-09
Identities = 34/80 (42%), Positives = 41/80 (51%), Gaps = 16/80 (20%)
Query: 50 RGYQGPPGPPGPPGIPGNHGNNGNNGATGH--EGAKGEKGDKGDLGPR------------ 95
RG QG PGPPGP G G+ G +G G G+ G +GE G G GP
Sbjct: 56 RGEQGTPGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGPSAVGKPGVPGLPG 115
Query: 96 --GERGQHGPKGEKGYPGIP 113
GERG +GPKG+ G G+P
Sbjct: 116 KPGERGPYGPKGDVGPAGLP 135
Score = 58.2 bits (139), Expect = 7e-09
Identities = 35/91 (38%), Positives = 42/91 (46%), Gaps = 26/91 (28%)
Query: 51 GYQGPPGPPG--PPGIPGNHGNNGNNGATGHEGAKGEKGDKG------------DLGPRG 96
G GPPGPPG PG+PG G G G G GAKGE+G G ++GP+G
Sbjct: 288 GIAGPPGPPGFGKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPGNMGPQG 347
Query: 97 ERG------------QHGPKGEKGYPGIPPE 115
+G + GP G GYPG E
Sbjct: 348 PKGIPGSHGLPGPKGETGPAGPAGYPGAKGE 378
Score = 57.4 bits (137), Expect = 1e-08
Identities = 36/92 (39%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 30 PQTGGLPPDCSKCCHGDYSFRGYQGPPGP---PGPPGIPGNHGNNGNNGATGHEGAKGEK 86
P G+P G +G G PGP PG G PG G NG G G+ GA G
Sbjct: 141 PGPPGIPGPAGISVPGKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGY-GAPGRP 199
Query: 87 GDKGDLGPRGERGQHGP-----KGEKGYPGIP 113
G++G GP+G G GP +GE G PG P
Sbjct: 200 GERGLPGPQGPTGPSGPPGVGKRGENGVPGQP 231
Score = 57.4 bits (137), Expect = 1e-08
Identities = 34/94 (36%), Positives = 40/94 (42%), Gaps = 15/94 (15%)
Query: 33 GGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGN---------------NGAT 77
G + P K G + G +G GP GP G PG G G+ +G
Sbjct: 341 GNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSDGKPGYPGKPGLDGPK 400
Query: 78 GHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYPG 111
G+ G G KGD G GP G G GP G KG PG
Sbjct: 401 GNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPG 434
Score = 55.8 bits (133), Expect = 3e-08
Identities = 33/88 (37%), Positives = 38/88 (43%), Gaps = 24/88 (27%)
Query: 50 RGYQGPPGPPGPPGI------------------PGNHGNNGNNGATGHEGAKGEKGDKGD 91
+G +GP G PG PG PGN G G G G G G KG+ G
Sbjct: 307 KGERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGP 366
Query: 92 LGP------RGERGQHGPKGEKGYPGIP 113
GP +GERG G G+ GYPG P
Sbjct: 367 AGPAGYPGAKGERGSPGSDGKPGYPGKP 394
Score = 54.7 bits (130), Expect = 7e-08
Identities = 34/83 (40%), Positives = 41/83 (49%), Gaps = 22/83 (26%)
Query: 51 GYQGPPGPPGP---------PGIPGNHGNNGNNG--ATGHEGAKGEKGDKGDLGP----- 94
G QGP G PGP PG+PG +G G G A G G +G G +G GP
Sbjct: 159 GQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYGAPGRPGERGLPGPQGPTGPSGPPG 218
Query: 95 ---RGER---GQHGPKGEKGYPG 111
RGE GQ G KG++G+PG
Sbjct: 219 VGKRGENGVPGQPGIKGDRGFPG 241
Score = 53.5 bits (127), Expect = 2e-07
Identities = 34/88 (38%), Positives = 38/88 (43%), Gaps = 19/88 (21%)
Query: 45 GDYSFRGYQGPPGPPG-----------------PPGIPGNHGNNGNNGATGHEGAKGEKG 87
G G +GPPGPPG P G PG G G GA G G G+KG
Sbjct: 130 GPAGLPGPRGPPGPPGIPGPAGISVPGKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKG 189
Query: 88 DKGDLGP--RGERGQHGPKGEKGYPGIP 113
+ G P GERG GP+G G G P
Sbjct: 190 EMGYGAPGRPGERGLPGPQGPTGPSGPP 217
Score = 53.1 bits (126), Expect = 2e-07
Identities = 39/107 (36%), Positives = 43/107 (40%), Gaps = 25/107 (23%)
Query: 34 GLPPDCSKCCHGDYSFRGYQGPP---------------------GPPGPPGIPGNHGNN- 71
GLP G G G P GPPGPPGIPG G +
Sbjct: 95 GLPGPPGPSAVGKPGVPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGISV 154
Query: 72 -GNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY--PGIPPE 115
G G G GA G +G G+ G G G +G KGE GY PG P E
Sbjct: 155 PGKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYGAPGRPGE 201
Score = 52.4 bits (124), Expect = 4e-07
Identities = 36/97 (37%), Positives = 39/97 (40%), Gaps = 28/97 (28%)
Query: 45 GDYSFRGYQGPPGPPGP-----------------------PGIPGNHGNNGNNGATGHE- 80
GD F G GP GPPGP PGIPG G G G G
Sbjct: 235 GDRGFPGEMGPIGPPGPQGPPGERGPEGIGKPGAAGAPGQPGIPGTKGLPGAPGIAGPPG 294
Query: 81 ----GAKGEKGDKGDLGPRGERGQHGPKGEKGYPGIP 113
G G G KG+ GP G G G KGE+G G+P
Sbjct: 295 PPGFGKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLP 331
>gi|56786155 complement component 1, q subcomponent, C chain
precursor [Homo sapiens]
Length = 245
Score = 93.6 bits (231), Expect = 1e-19
Identities = 69/217 (31%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 45 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 104
G Y G G PG PG G G G G G G +G KG KG+ G G G++GP
Sbjct: 31 GCYGIPGMPGLPGAPGKDGYDGLPGPKGEPGIPAIPGIRGPKGQKGEPGLPGHPGKNGPM 90
Query: 105 GEKGYPGIP----------------PELQIAFMASLATHF-SNQNSGIIFSSVETNIGNF 147
G G PG+P + Q F + TH NS I F++V TN
Sbjct: 91 GPPGMPGVPGPMGIPGEPGEEGRYKQKFQSVFTVTRQTHQPPAPNSLIRFNAVLTNPQGD 150
Query: 148 FDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNH 207
+D TG+F V G+Y+F + + V L +G V + + K + +S
Sbjct: 151 YDTSTGKFTCKVPGLYYFVYHA---SHTANLCVLLYRSGVKVVTFCGHTSK-TNQVNSGG 206
Query: 208 AVLKLAKGDEVWLRMGN-GALHGDHQRFSTFAGFLLF 243
+L+L G+EVWL + + + G S F+GFLLF
Sbjct: 207 VLLRLQVGEEVWLAVNDYYDMVGIQGSDSVFSGFLLF 243
>gi|166235903 complement component 1, q subcomponent, C chain
precursor [Homo sapiens]
Length = 245
Score = 93.6 bits (231), Expect = 1e-19
Identities = 69/217 (31%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 45 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 104
G Y G G PG PG G G G G G G +G KG KG+ G G G++GP
Sbjct: 31 GCYGIPGMPGLPGAPGKDGYDGLPGPKGEPGIPAIPGIRGPKGQKGEPGLPGHPGKNGPM 90
Query: 105 GEKGYPGIP----------------PELQIAFMASLATHF-SNQNSGIIFSSVETNIGNF 147
G G PG+P + Q F + TH NS I F++V TN
Sbjct: 91 GPPGMPGVPGPMGIPGEPGEEGRYKQKFQSVFTVTRQTHQPPAPNSLIRFNAVLTNPQGD 150
Query: 148 FDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNH 207
+D TG+F V G+Y+F + + V L +G V + + K + +S
Sbjct: 151 YDTSTGKFTCKVPGLYYFVYHA---SHTANLCVLLYRSGVKVVTFCGHTSK-TNQVNSGG 206
Query: 208 AVLKLAKGDEVWLRMGN-GALHGDHQRFSTFAGFLLF 243
+L+L G+EVWL + + + G S F+GFLLF
Sbjct: 207 VLLRLQVGEEVWLAVNDYYDMVGIQGSDSVFSGFLLF 243
>gi|87298828 complement component 1, q subcomponent, B chain
precursor [Homo sapiens]
Length = 253
Score = 92.4 bits (228), Expect = 3e-19
Identities = 71/213 (33%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYP 110
G G PGP G PG PG G G G G G GEKGD G G G+ G GP G KG P
Sbjct: 42 GIPGTPGPDGQPGTPGIKGEKGLPGLAGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGP 101
Query: 111 GIP-------------PELQIAFMASLATHFS-NQNSGIIFSSVETNIGNFFDVMTGRFG 156
G P +IAF A+ + ++ I F V TN+ N ++ +G+F
Sbjct: 102 GAPGAPGPKGESGDYKATQKIAFSATRTINVPLRRDQTIRFDHVITNMNNNYEPRSGKFT 161
Query: 157 APVSGVYFFTFSMMKHEDVEEVYVYLMHNGN-----TVFSMYSYEMKGKSDTSSNHAVLK 211
V G+Y+FT+ + + V LM F Y+Y ++ VLK
Sbjct: 162 CKVPGLYYFTYHASSRGN---LCVNLMRGRERAQKVVTFCDYAY---NTFQVTTGGMVLK 215
Query: 212 LAKGDEVWLR-MGNGALHGDHQRFSTFAGFLLF 243
L +G+ V+L+ +L G S F+GFLLF
Sbjct: 216 LEQGENVFLQATDKNSLLGMEGANSIFSGFLLF 248
>gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 90.9 bits (224), Expect = 9e-19
Identities = 78/261 (29%), Positives = 104/261 (39%), Gaps = 55/261 (21%)
Query: 34 GLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGA--------KGE 85
G+P D + G G GP GP GPPGIPG G G G G G G
Sbjct: 486 GIPGD--QGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGP 543
Query: 86 KGDKGDLGPRGERGQHGPKGEKGYPGIP--------------PELQI------------- 118
G G LGP+G+ G GP G G PG P P++ +
Sbjct: 544 PGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPPHAYGA 603
Query: 119 -------------AFMASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFF 165
AF A L F + + F+ + N ++ TG F V GVY+F
Sbjct: 604 KKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFNKLLYNGRQNYNPQTGIFTCEVPGVYYF 663
Query: 166 TFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMGN- 224
+ + H V+V L N V Y KG D +S AVL L GD V+L+M +
Sbjct: 664 AYHV--HCKGGNVWVALFKNNEPVMYTYDEYKKGFLDQASGSAVLLLRPGDRVFLQMPSE 721
Query: 225 --GALHGDHQRFSTFAGFLLF 243
L+ S+F+G+LL+
Sbjct: 722 QAAGLYAGQYVHSSFSGYLLY 742
Score = 68.9 bits (167), Expect = 4e-12
Identities = 38/90 (42%), Positives = 43/90 (47%), Gaps = 22/90 (24%)
Query: 45 GDYSFRGYQGPPGPPGPPGIPGNH----------------------GNNGNNGATGHEGA 82
G+ RG GP GPPGPPG+PG+ G G GA G GA
Sbjct: 118 GEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGA 177
Query: 83 KGEKGDKGDLGPRGERGQHGPKGEKGYPGI 112
KGE G KG++GP G G GP G G PGI
Sbjct: 178 KGEIGQKGEIGPMGIPGPQGPPGPHGLPGI 207
Score = 63.5 bits (153), Expect = 2e-10
Identities = 33/66 (50%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 50 RGYQGPPGPPGPPGIPG--NHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEK 107
+G QG PG PGPPG+PG G G G G G G G +G+ GP G G GP GE
Sbjct: 333 KGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEP 392
Query: 108 GYPGIP 113
G PGIP
Sbjct: 393 GLPGIP 398
Score = 62.4 bits (150), Expect = 3e-10
Identities = 35/84 (41%), Positives = 40/84 (47%), Gaps = 16/84 (19%)
Query: 45 GDYSFRGYQGPPGP-----------PGPPGIPGNHGNNGNNGATGHEGAKGEKGDK---- 89
G G QGPPGP PG PG PG G+ G G G +G +G KGDK
Sbjct: 188 GPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGM 247
Query: 90 -GDLGPRGERGQHGPKGEKGYPGI 112
G G +G G HGP G G PG+
Sbjct: 248 PGAPGVKGPPGMHGPPGPVGLPGV 271
Score = 62.4 bits (150), Expect = 3e-10
Identities = 30/62 (48%), Positives = 34/62 (54%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYP 110
G GP GPPGP G PG G G G G G G +G G +GP+GE GQ G G G P
Sbjct: 417 GIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVP 476
Query: 111 GI 112
G+
Sbjct: 477 GL 478
Score = 58.5 bits (140), Expect = 5e-09
Identities = 31/66 (46%), Positives = 36/66 (54%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYP 110
G G GPPG PG+PG G G GA G G KGE G G GP G +G+ G +G G P
Sbjct: 381 GAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKP 440
Query: 111 GIPPEL 116
G E+
Sbjct: 441 GFLGEV 446
Score = 58.5 bits (140), Expect = 5e-09
Identities = 38/100 (38%), Positives = 45/100 (45%), Gaps = 23/100 (23%)
Query: 29 SPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGD 88
+P GG P G+ G GP GPPG G PG G G G G G KGE G
Sbjct: 382 APGIGGPP--------GEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGL 433
Query: 89 K---------GDLGPRGERGQHGP------KGEKGYPGIP 113
+ G++GP G RG GP G+KG PG+P
Sbjct: 434 QGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLP 473
Score = 58.2 bits (139), Expect = 7e-09
Identities = 37/87 (42%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 45 GDYSFRGYQGPPGP---------PGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGD---- 91
G+ G QGPPGP PG PG G G G G G G KGE G KG
Sbjct: 414 GEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLP 473
Query: 92 -----LGPRGERGQHGPKGEKGYPGIP 113
LGP+GE G G +G +G PGIP
Sbjct: 474 GVPGLLGPKGEPGIPGDQGLQGPPGIP 500
Score = 56.6 bits (135), Expect = 2e-08
Identities = 31/67 (46%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 50 RGYQGPPGPPG---PPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGE 106
RG +GP G PG PPG PG G G G G G G KG+ G +GP+G G G G
Sbjct: 374 RGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGL 433
Query: 107 KGYPGIP 113
+G+PG P
Sbjct: 434 QGFPGKP 440
Score = 55.8 bits (133), Expect = 3e-08
Identities = 35/76 (46%), Positives = 41/76 (53%), Gaps = 10/76 (13%)
Query: 51 GYQGP---PGPPGPPGIPG--NHGNNGNNGATGHEGAKGEKGDKGDLGPRG-----ERGQ 100
G QGP PG GPPGIPG G +G G G G KGE+G G GP G + G
Sbjct: 296 GPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGF 355
Query: 101 HGPKGEKGYPGIPPEL 116
GPKG++G G+P L
Sbjct: 356 PGPKGDRGMGGVPGAL 371
Score = 55.8 bits (133), Expect = 3e-08
Identities = 30/63 (47%), Positives = 33/63 (52%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYP 110
G +G PG PG PG+ G G G G G +G G G G GP G G GPKGE G P
Sbjct: 465 GQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLP 524
Query: 111 GIP 113
G P
Sbjct: 525 GPP 527
Score = 55.5 bits (132), Expect = 4e-08
Identities = 32/78 (41%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Query: 45 GDYSFRGYQGPPGP---------PGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPR 95
G RG GP GP PG PG+PG G G G G +G +G G G GP
Sbjct: 447 GPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPS 506
Query: 96 GERGQHGPKGEKGYPGIP 113
G G G G KG PG+P
Sbjct: 507 GPIGPPGIPGPKGEPGLP 524
Score = 55.1 bits (131), Expect = 6e-08
Identities = 30/65 (46%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 51 GYQGPPG---PPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEK 107
G +GPPG PPGP G+PG G G G G +G G+ G G+ GP+G G G +G
Sbjct: 252 GVKGPPGMHGPPGPVGLPGV-GKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPP 310
Query: 108 GYPGI 112
G PGI
Sbjct: 311 GIPGI 315
Score = 53.9 bits (128), Expect = 1e-07
Identities = 29/65 (44%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEK--GDKGDLGPRGERGQHGPKGEKG 108
G+ GP GP G PG PG G G G G +G G G G G G+ G G KGE+G
Sbjct: 278 GFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQG 337
Query: 109 YPGIP 113
PG+P
Sbjct: 338 LPGLP 342
Score = 53.9 bits (128), Expect = 1e-07
Identities = 28/64 (43%), Positives = 33/64 (51%)
Query: 50 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 109
+G G GP GPPG G G G G G G G G +G GP G +G+ G KG G
Sbjct: 413 KGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGL 472
Query: 110 PGIP 113
PG+P
Sbjct: 473 PGVP 476
Score = 52.4 bits (124), Expect = 4e-07
Identities = 37/87 (42%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 30 PQTGGLP-PDCSKCCHGDYSFRGYQGPPG---PPGPPGIPGNHGNNGNNGATGHEGAKGE 85
P GLP P K G G G PG P G PGIPG+ G G G G G G
Sbjct: 449 PGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGP 508
Query: 86 KGDKGDLGPRGERGQHGPKGEKGYPGI 112
G G GP+GE G GP G+PGI
Sbjct: 509 IGPPGIPGPKGEPGLPGP---PGFPGI 532
Score = 49.7 bits (117), Expect = 2e-06
Identities = 29/65 (44%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGER---GQHGPKGEK 107
G GP G GP G PG G G G G G G G G GP+GE G GP G K
Sbjct: 369 GALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPK 428
Query: 108 GYPGI 112
G PG+
Sbjct: 429 GEPGL 433
Score = 33.1 bits (74), Expect = 0.23
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 89 KGDLGPRGERGQHGPKGEKGYPG 111
+G+ GPRGE G GP G G PG
Sbjct: 117 RGEQGPRGEPGPRGPPGPPGLPG 139
>gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 90.9 bits (224), Expect = 9e-19
Identities = 78/261 (29%), Positives = 104/261 (39%), Gaps = 55/261 (21%)
Query: 34 GLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGA--------KGE 85
G+P D + G G GP GP GPPGIPG G G G G G G
Sbjct: 486 GIPGD--QGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGP 543
Query: 86 KGDKGDLGPRGERGQHGPKGEKGYPGIP--------------PELQI------------- 118
G G LGP+G+ G GP G G PG P P++ +
Sbjct: 544 PGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPPHAYGA 603
Query: 119 -------------AFMASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFF 165
AF A L F + + F+ + N ++ TG F V GVY+F
Sbjct: 604 KKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFNKLLYNGRQNYNPQTGIFTCEVPGVYYF 663
Query: 166 TFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMGN- 224
+ + H V+V L N V Y KG D +S AVL L GD V+L+M +
Sbjct: 664 AYHV--HCKGGNVWVALFKNNEPVMYTYDEYKKGFLDQASGSAVLLLRPGDRVFLQMPSE 721
Query: 225 --GALHGDHQRFSTFAGFLLF 243
L+ S+F+G+LL+
Sbjct: 722 QAAGLYAGQYVHSSFSGYLLY 742
Score = 68.9 bits (167), Expect = 4e-12
Identities = 38/90 (42%), Positives = 43/90 (47%), Gaps = 22/90 (24%)
Query: 45 GDYSFRGYQGPPGPPGPPGIPGNH----------------------GNNGNNGATGHEGA 82
G+ RG GP GPPGPPG+PG+ G G GA G GA
Sbjct: 118 GEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGA 177
Query: 83 KGEKGDKGDLGPRGERGQHGPKGEKGYPGI 112
KGE G KG++GP G G GP G G PGI
Sbjct: 178 KGEIGQKGEIGPMGIPGPQGPPGPHGLPGI 207
Score = 63.5 bits (153), Expect = 2e-10
Identities = 33/66 (50%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 50 RGYQGPPGPPGPPGIPG--NHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEK 107
+G QG PG PGPPG+PG G G G G G G G +G+ GP G G GP GE
Sbjct: 333 KGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEP 392
Query: 108 GYPGIP 113
G PGIP
Sbjct: 393 GLPGIP 398
Score = 62.4 bits (150), Expect = 3e-10
Identities = 35/84 (41%), Positives = 40/84 (47%), Gaps = 16/84 (19%)
Query: 45 GDYSFRGYQGPPGP-----------PGPPGIPGNHGNNGNNGATGHEGAKGEKGDK---- 89
G G QGPPGP PG PG PG G+ G G G +G +G KGDK
Sbjct: 188 GPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGM 247
Query: 90 -GDLGPRGERGQHGPKGEKGYPGI 112
G G +G G HGP G G PG+
Sbjct: 248 PGAPGVKGPPGMHGPPGPVGLPGV 271
Score = 62.4 bits (150), Expect = 3e-10
Identities = 30/62 (48%), Positives = 34/62 (54%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYP 110
G GP GPPGP G PG G G G G G G +G G +GP+GE GQ G G G P
Sbjct: 417 GIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVP 476
Query: 111 GI 112
G+
Sbjct: 477 GL 478
Score = 58.5 bits (140), Expect = 5e-09
Identities = 31/66 (46%), Positives = 36/66 (54%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYP 110
G G GPPG PG+PG G G GA G G KGE G G GP G +G+ G +G G P
Sbjct: 381 GAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKP 440
Query: 111 GIPPEL 116
G E+
Sbjct: 441 GFLGEV 446
Score = 58.5 bits (140), Expect = 5e-09
Identities = 38/100 (38%), Positives = 45/100 (45%), Gaps = 23/100 (23%)
Query: 29 SPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGD 88
+P GG P G+ G GP GPPG G PG G G G G G KGE G
Sbjct: 382 APGIGGPP--------GEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGL 433
Query: 89 K---------GDLGPRGERGQHGP------KGEKGYPGIP 113
+ G++GP G RG GP G+KG PG+P
Sbjct: 434 QGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLP 473
Score = 58.2 bits (139), Expect = 7e-09
Identities = 37/87 (42%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 45 GDYSFRGYQGPPGP---------PGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGD---- 91
G+ G QGPPGP PG PG G G G G G G KGE G KG
Sbjct: 414 GEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLP 473
Query: 92 -----LGPRGERGQHGPKGEKGYPGIP 113
LGP+GE G G +G +G PGIP
Sbjct: 474 GVPGLLGPKGEPGIPGDQGLQGPPGIP 500
Score = 56.6 bits (135), Expect = 2e-08
Identities = 31/67 (46%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 50 RGYQGPPGPPG---PPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGE 106
RG +GP G PG PPG PG G G G G G G KG+ G +GP+G G G G
Sbjct: 374 RGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGL 433
Query: 107 KGYPGIP 113
+G+PG P
Sbjct: 434 QGFPGKP 440
Score = 55.8 bits (133), Expect = 3e-08
Identities = 35/76 (46%), Positives = 41/76 (53%), Gaps = 10/76 (13%)
Query: 51 GYQGP---PGPPGPPGIPG--NHGNNGNNGATGHEGAKGEKGDKGDLGPRG-----ERGQ 100
G QGP PG GPPGIPG G +G G G G KGE+G G GP G + G
Sbjct: 296 GPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGF 355
Query: 101 HGPKGEKGYPGIPPEL 116
GPKG++G G+P L
Sbjct: 356 PGPKGDRGMGGVPGAL 371
Score = 55.8 bits (133), Expect = 3e-08
Identities = 30/63 (47%), Positives = 33/63 (52%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYP 110
G +G PG PG PG+ G G G G G +G G G G GP G G GPKGE G P
Sbjct: 465 GQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLP 524
Query: 111 GIP 113
G P
Sbjct: 525 GPP 527
Score = 55.5 bits (132), Expect = 4e-08
Identities = 32/78 (41%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Query: 45 GDYSFRGYQGPPGP---------PGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPR 95
G RG GP GP PG PG+PG G G G G +G +G G G GP
Sbjct: 447 GPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPS 506
Query: 96 GERGQHGPKGEKGYPGIP 113
G G G G KG PG+P
Sbjct: 507 GPIGPPGIPGPKGEPGLP 524
Score = 55.1 bits (131), Expect = 6e-08
Identities = 30/65 (46%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 51 GYQGPPG---PPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEK 107
G +GPPG PPGP G+PG G G G G +G G+ G G+ GP+G G G +G
Sbjct: 252 GVKGPPGMHGPPGPVGLPGV-GKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPP 310
Query: 108 GYPGI 112
G PGI
Sbjct: 311 GIPGI 315
Score = 53.9 bits (128), Expect = 1e-07
Identities = 29/65 (44%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEK--GDKGDLGPRGERGQHGPKGEKG 108
G+ GP GP G PG PG G G G G +G G G G G G+ G G KGE+G
Sbjct: 278 GFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQG 337
Query: 109 YPGIP 113
PG+P
Sbjct: 338 LPGLP 342
Score = 53.9 bits (128), Expect = 1e-07
Identities = 28/64 (43%), Positives = 33/64 (51%)
Query: 50 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 109
+G G GP GPPG G G G G G G G G +G GP G +G+ G KG G
Sbjct: 413 KGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGL 472
Query: 110 PGIP 113
PG+P
Sbjct: 473 PGVP 476
Score = 52.4 bits (124), Expect = 4e-07
Identities = 37/87 (42%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 30 PQTGGLP-PDCSKCCHGDYSFRGYQGPPG---PPGPPGIPGNHGNNGNNGATGHEGAKGE 85
P GLP P K G G G PG P G PGIPG+ G G G G G G
Sbjct: 449 PGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGP 508
Query: 86 KGDKGDLGPRGERGQHGPKGEKGYPGI 112
G G GP+GE G GP G+PGI
Sbjct: 509 IGPPGIPGPKGEPGLPGP---PGFPGI 532
Score = 49.7 bits (117), Expect = 2e-06
Identities = 29/65 (44%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGER---GQHGPKGEK 107
G GP G GP G PG G G G G G G G G GP+GE G GP G K
Sbjct: 369 GALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPK 428
Query: 108 GYPGI 112
G PG+
Sbjct: 429 GEPGL 433
Score = 33.1 bits (74), Expect = 0.23
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 89 KGDLGPRGERGQHGPKGEKGYPG 111
+G+ GPRGE G GP G G PG
Sbjct: 117 RGEQGPRGEPGPRGPPGPPGLPG 139
>gi|122937273 hypothetical protein LOC131149 [Homo sapiens]
Length = 477
Score = 89.0 bits (219), Expect = 3e-18
Identities = 68/230 (29%), Positives = 99/230 (43%), Gaps = 29/230 (12%)
Query: 41 KCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGD------KGDLGP 94
K C GD RG +G G G G G+ G++G G +G G G KGD KG+LGP
Sbjct: 241 KGCCGDSGERGGKGQKGEGGMKGEKGSKGDSGMEGKSGRNGLPGAKGDPGIKGEKGELGP 300
Query: 95 ---------------RGERGQHGPKGEKGYPGIPPEL----QIAFMASLATHFSNQNSGI 135
+G RG G KG +G+ G EL + AF A L+ F N I
Sbjct: 301 PGLLGPTGPKGDIGNKGVRGPTGKKGSRGFKGSKGELARVPRSAFSAGLSKPFPPPNIPI 360
Query: 136 IFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYSY 195
F + N + +TG+F + G Y F++ + + L+ F
Sbjct: 361 KFEKILYNDQGNYSPVTGKFNCSIPGTYVFSYHITVRG--RPARISLVAQNKKQFKSRET 418
Query: 196 EMKGKSDTSSNHAVLKLAKGDEVWLRMGN--GALHGDHQRFSTFAGFLLF 243
+ D +S +LKL+ GD+VWL + ++ + S F GFLL+
Sbjct: 419 LYGQEIDQASLLVILKLSAGDQVWLEVSKDWNGVYVSAEDDSIFTGFLLY 468
Score = 63.5 bits (153), Expect = 2e-10
Identities = 33/73 (45%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 45 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGE------KGDKGDLGPRGER 98
GD GY G PG G PG G+ GN G G G +G+KG+ KG+KGD G G
Sbjct: 158 GDQGVPGYPGKPGAQGEPGPKGDKGNIGLGGVKGQKGSKGDTCGNCTKGEKGDQGAMGSP 217
Query: 99 GQHGPKGEKGYPG 111
G HG G KG G
Sbjct: 218 GLHGGPGAKGEKG 230
Score = 60.1 bits (144), Expect = 2e-09
Identities = 33/87 (37%), Positives = 43/87 (49%), Gaps = 12/87 (13%)
Query: 38 DCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGE 97
+C CC +G G G PGP G GN G G G G +G +G KG+KG G RG+
Sbjct: 100 NCCDCCSPVPGQKGEPGETGQPGPKGEAGNLGIPGPPGVVGPQGPRGYKGEKGLKGERGD 159
Query: 98 ------------RGQHGPKGEKGYPGI 112
+G+ GPKG+KG G+
Sbjct: 160 QGVPGYPGKPGAQGEPGPKGDKGNIGL 186
Score = 60.1 bits (144), Expect = 2e-09
Identities = 29/63 (46%), Positives = 35/63 (55%)
Query: 50 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 109
RG QG PG PG PG G G G+ G G G KG+KG KGD +G+ G +G G
Sbjct: 157 RGDQGVPGYPGKPGAQGEPGPKGDKGNIGLGGVKGQKGSKGDTCGNCTKGEKGDQGAMGS 216
Query: 110 PGI 112
PG+
Sbjct: 217 PGL 219
Score = 53.1 bits (126), Expect = 2e-07
Identities = 28/58 (48%), Positives = 31/58 (53%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKG 108
G QGP G G G+ G G+ G G G GA+GE G KGD G G G G KG KG
Sbjct: 140 GPQGPRGYKGEKGLKGERGDQGVPGYPGKPGAQGEPGPKGDKGNIGLGGVKGQKGSKG 197
Score = 50.4 bits (119), Expect = 1e-06
Identities = 35/98 (35%), Positives = 40/98 (40%), Gaps = 5/98 (5%)
Query: 15 FFLPFCLCQDEYMESPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNN 74
FFL C C P G P + + G G G PGPPG G G G G
Sbjct: 97 FFLNCCDCCSPV---PGQKGEPGETGQ--PGPKGEAGNLGIPGPPGVVGPQGPRGYKGEK 151
Query: 75 GATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYPGI 112
G G G +G G G G +GE G G KG G G+
Sbjct: 152 GLKGERGDQGVPGYPGKPGAQGEPGPKGDKGNIGLGGV 189
>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
Length = 703
Score = 88.2 bits (217), Expect = 6e-18
Identities = 72/221 (32%), Positives = 99/221 (44%), Gaps = 13/221 (5%)
Query: 34 GLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKG--- 90
GLP + G+ G GPPG PG PGI G G G G G GA E G G
Sbjct: 487 GLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDETGIAGLHL 546
Query: 91 -DLGPRGERGQHGPKGEKGYPGIPPELQIAFMASLATHFSNQNSGIIFSSVETNIGNFFD 149
+ G G G K + G + AF A L + F + F N + ++
Sbjct: 547 PNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTLYNGHSGYN 606
Query: 150 VMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYE--MKGKSDTSSNH 207
TG F PV GVY+F + H V+ V++ N V + Y+Y+ KG D +S
Sbjct: 607 PATGIFTCPVGGVYYFAY----HVHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQASGG 662
Query: 208 AVLKLAKGDEVWLRMGN---GALHGDHQRFSTFAGFLLFET 245
AVL+L D+VW++M + L+ S+F+GFLL T
Sbjct: 663 AVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT 703
Score = 64.3 bits (155), Expect = 9e-11
Identities = 36/86 (41%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 33 GGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNH-----GNNGNNGATGHEGAKGEKG 87
G + P G+ RG QG GPPGPPG+PG G G G G G +GE G
Sbjct: 132 GKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPG 191
Query: 88 DKGDLGPRGERGQHGPKGEKGYPGIP 113
+G+ GP G+RG G G G PG+P
Sbjct: 192 PQGEPGPPGDRGLKGDNG-VGQPGLP 216
Score = 64.3 bits (155), Expect = 9e-11
Identities = 38/92 (41%), Positives = 45/92 (48%), Gaps = 13/92 (14%)
Query: 28 ESPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPG------PPGIPGNHGNNGNNGATGHEG 81
+ PQ G PP G G +GPPGP G PPG+PG G+ G +G G G
Sbjct: 351 QGPQGLGGPPGLP----GSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPG 406
Query: 82 AKGEKGDKGDLGPRGERGQHGPKGEKGYPGIP 113
GE+G G GP G GPKGE G+ G P
Sbjct: 407 VPGERGLPGAHGPPGPT---GPKGEPGFTGRP 435
Score = 62.4 bits (150), Expect = 3e-10
Identities = 30/67 (44%), Positives = 36/67 (53%)
Query: 45 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 104
G+ +G GPPG PG G+PG G G G G G G G +GD GP G G+ G
Sbjct: 349 GEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVP 408
Query: 105 GEKGYPG 111
GE+G PG
Sbjct: 409 GERGLPG 415
Score = 61.2 bits (147), Expect = 8e-10
Identities = 33/70 (47%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 45 GDYSFRGYQGPPGPPGPPGIPG--NHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHG 102
G G G G PGPPG+PG G G +G G G KGE G G GPRGE G G
Sbjct: 211 GQPGLPGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVG 270
Query: 103 PKGEKGYPGI 112
PKG G G+
Sbjct: 271 PKGPPGVDGV 280
Score = 60.5 bits (145), Expect = 1e-09
Identities = 32/65 (49%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYP 110
G QGP G GPPG+PG+ G G G G KGE G G G G RG GP G G P
Sbjct: 349 GEQGPQGLGGPPGLPGSAGLPGRRGPPG---PKGEAGPGGPPGVPGIRGDQGPSGLAGKP 405
Query: 111 GIPPE 115
G+P E
Sbjct: 406 GVPGE 410
Score = 59.3 bits (142), Expect = 3e-09
Identities = 31/64 (48%), Positives = 34/64 (53%)
Query: 50 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 109
RG QGP G G PG+PG G G +G G G KGE G G G G G G KG+ G
Sbjct: 393 RGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGL 452
Query: 110 PGIP 113
PG P
Sbjct: 453 PGQP 456
Score = 58.2 bits (139), Expect = 7e-09
Identities = 33/83 (39%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 30 PQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDK 89
P + GLP G +G GP GPPG PGI G+ G +G G G G +G G
Sbjct: 363 PGSAGLPGR-----RGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAH 417
Query: 90 GDLGPRGERGQHGPKGEKGYPGI 112
G GP G +G+ G G G PG+
Sbjct: 418 GPPGPTGPKGEPGFTGRPGGPGV 440
Score = 57.4 bits (137), Expect = 1e-08
Identities = 34/86 (39%), Positives = 38/86 (44%), Gaps = 15/86 (17%)
Query: 45 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGE---------------KGDK 89
G+ G GPPGP GP G PG G G G G G KG+ G +
Sbjct: 409 GERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQ 468
Query: 90 GDLGPRGERGQHGPKGEKGYPGIPPE 115
G GP G +G G KGE G PG P E
Sbjct: 469 GPAGPIGPQGLPGLKGEPGLPGPPGE 494
Score = 55.8 bits (133), Expect = 3e-08
Identities = 35/88 (39%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 30 PQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAK---GEK 86
P T G P +G G +G GP G PG+ G+ G G +G G +G + G
Sbjct: 301 PGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPP 360
Query: 87 GDKGDLGPRGERGQHGPKGEKGYPGIPP 114
G G G G RG GPKGE G PG PP
Sbjct: 361 GLPGSAGLPGRRGPPGPKGEAG-PGGPP 387
Score = 54.7 bits (130), Expect = 7e-08
Identities = 42/115 (36%), Positives = 49/115 (42%), Gaps = 24/115 (20%)
Query: 18 PFCLCQDEYMESPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGN--------HG 69
PF + +Y+E P LP D G+ G GP GPPGPPG PG HG
Sbjct: 55 PFREGKGQYLEMPLPL-LPMDLK----GEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHG 109
Query: 70 NNG--------NNGATGHEGAKGEKGDKGDLGPRGE---RGQHGPKGEKGYPGIP 113
G G G G G+ G G G RGE RG G +G G PG+P
Sbjct: 110 QPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLP 164
Score = 54.3 bits (129), Expect = 1e-07
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 50 RGYQGPPGPPGPPGI-----PGNHGNNGNNGATGHEGAKGEKGDKGDLGPR--GERGQHG 102
RG G GP GPPG+ PG G G G +G +G G +G G +GP G G G
Sbjct: 263 RGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPG 322
Query: 103 PKGEKGYPGIP 113
PKG++G G+P
Sbjct: 323 PKGDRGPAGVP 333
Score = 54.3 bits (129), Expect = 1e-07
Identities = 31/76 (40%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 45 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGH---------EGAKGEKGDKGDLGPR 95
GD G G PG PG G+PG HG G G G G G G KGDLG
Sbjct: 394 GDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLP 453
Query: 96 GERGQHGPKGEKGYPG 111
G+ G GP G G G
Sbjct: 454 GQPGLRGPSGIPGLQG 469
>gi|7705753 complement component 1, q subcomponent, A chain
precursor [Homo sapiens]
Length = 245
Score = 84.7 bits (208), Expect = 7e-17
Identities = 62/198 (31%), Positives = 93/198 (46%), Gaps = 6/198 (3%)
Query: 51 GYQGPPGPPGPPGI-PGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 109
G +G G PG PGI G G G+ G G G G+ G G GP G RG G KG KG
Sbjct: 46 GLKGEQGEPGAPGIRTGIQGLKGDQGEPGPSGNPGKVGYPGPSGPLGARGIPGIKGTKGS 105
Query: 110 PGIPPELQIAFMASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSM 169
PG + +++ + + +IF +V TN + +GRF V G Y+FTF +
Sbjct: 106 PGNIKDQPRPAFSAIRRNPPMGGNVVIFDTVITNQEEPYQNHSGRFVCTVPGYYYFTFQV 165
Query: 170 MKHEDVEEVYVYLMHNGNTVFSMYSYEM--KGKSDTSSNHAVLKLAKGDEVWLRMG--NG 225
+ ++ + + G S+ + KG S VL+L +GD+VW+ G
Sbjct: 166 LSQWEI-CLSIVSSSRGQVRRSLGFCDTTNKGLFQVVSGGMVLQLQQGDQVWVEKDPKKG 224
Query: 226 ALHGDHQRFSTFAGFLLF 243
++ + S F+GFL+F
Sbjct: 225 HIYQGSEADSVFSGFLIF 242
Score = 34.7 bits (78), Expect = 0.078
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 87 GDKGDLGPRGERGQHGPKGEKGYPGIP 113
G KG+ G G RG+ G KGE+G PG P
Sbjct: 31 GKKGEAGRPGRRGRPGLKGEQGEPGAP 57
Score = 33.5 bits (75), Expect = 0.17
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 84 GEKGDKGDLGPRGERGQHGPKGEKGYPGIPPELQ 117
G+KG+ G G RG G G +GE G PGI +Q
Sbjct: 31 GKKGEAGRPGRRGRPGLKGEQGEPGAPGIRTGIQ 64
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 80.1 bits (196), Expect = 2e-15
Identities = 38/69 (55%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 50 RGYQGPPGPPGPPGIPGNHGN------NGNNGATGHEGAKGEKGDKGDLGPRGERGQHGP 103
RG QG PGP GPPG+PG G NG NG G G G KG+KGD G G G+ GP
Sbjct: 1814 RGEQGLPGPSGPPGLPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGASGREGRDGP 1873
Query: 104 KGEKGYPGI 112
KGE+G PGI
Sbjct: 1874 KGERGAPGI 1882
Score = 74.3 bits (181), Expect = 9e-14
Identities = 43/98 (43%), Positives = 50/98 (51%), Gaps = 23/98 (23%)
Query: 34 GLPPDCSKCCHGDYSFRGYQGPPGP------PGPPGIPGNHGNNGNNGATGHEGAKGEKG 87
GLP K GD RG +GPPGP PG PG+PG G+ G G G G KGEKG
Sbjct: 1392 GLPGTAMK---GDKGDRGERGPPGPGEGGIAPGEPGLPGLPGSPGPQGPVGPPGKKGEKG 1448
Query: 88 DK--------------GDLGPRGERGQHGPKGEKGYPG 111
D G+ GPRG G GPKG++G+PG
Sbjct: 1449 DSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPG 1486
Score = 72.0 bits (175), Expect = 4e-13
Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 11/80 (13%)
Query: 51 GYQGPPGPPGP--------PGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGP---RGERG 99
G GPPGPPGP PG+ G G G GA G G+ G++G KGD G +G+RG
Sbjct: 2082 GTPGPPGPPGPKVSVDEPGPGLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRG 2141
Query: 100 QHGPKGEKGYPGIPPELQIA 119
+ GP+G+ G PG+P E +A
Sbjct: 2142 EPGPRGQDGNPGLPGERGMA 2161
Score = 71.2 bits (173), Expect = 8e-13
Identities = 43/127 (33%), Positives = 53/127 (41%), Gaps = 27/127 (21%)
Query: 17 LPFCLCQDEYMESPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGA 76
L LCQ + P+ P C K G+ G +G GPPG PG+PG G G G
Sbjct: 1229 LATALCQASFTTQPRPEPCPVYCPKGQKGEPGEMGLRGQVGPPGDPGLPGRTGAPGPQGP 1288
Query: 77 TGHEGAKGE---------------------------KGDKGDLGPRGERGQHGPKGEKGY 109
G AKGE KG G GPRG+ G+ GP+G KG
Sbjct: 1289 PGSATAKGERGFPGADGRPGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGE 1348
Query: 110 PGIPPEL 116
PG P ++
Sbjct: 1349 PGAPGQV 1355
Score = 69.7 bits (169), Expect = 2e-12
Identities = 32/69 (46%), Positives = 40/69 (57%)
Query: 45 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 104
G+ +G +GPPG PG PG G G G G G G KG++GD G+ G G G GPK
Sbjct: 1634 GEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPK 1693
Query: 105 GEKGYPGIP 113
G++G PG P
Sbjct: 1694 GDRGEPGPP 1702
Score = 66.6 bits (161), Expect = 2e-11
Identities = 37/82 (45%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Query: 45 GDYSFRGYQGPPG-------PPGP------PGIPGNHGNNGNNGATGHEGAKGEKGDKGD 91
GD G QGPPG PPGP PG PG G G G G G GE+G++G+
Sbjct: 2006 GDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGE 2065
Query: 92 LGPRGERGQHGPKGEKGYPGIP 113
G RGE+G+ GP G G PG P
Sbjct: 2066 KGERGEQGRDGPPGLPGTPGPP 2087
Score = 66.6 bits (161), Expect = 2e-11
Identities = 32/64 (50%), Positives = 40/64 (62%)
Query: 50 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 109
RG +G G GP G+ G+ G G+NG G +G+KGE GDKG G G RG GP+G+ G
Sbjct: 2532 RGAKGDMGERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPGA 2591
Query: 110 PGIP 113
GIP
Sbjct: 2592 AGIP 2595
Score = 66.2 bits (160), Expect = 2e-11
Identities = 32/64 (50%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDL---GPRGERGQHGPKGEK 107
G G PGPPGPPG+ G+ G G GA G G G+ G +G++ GP GERG GP G +
Sbjct: 2374 GVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGRE 2433
Query: 108 GYPG 111
G PG
Sbjct: 2434 GIPG 2437
Score = 65.5 bits (158), Expect = 4e-11
Identities = 32/69 (46%), Positives = 36/69 (52%)
Query: 45 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 104
G G GPPG GPPG G+ G G G G G GE G+KGD GP G+ G G
Sbjct: 1595 GPIGLTGRAGPPGDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKA 1654
Query: 105 GEKGYPGIP 113
GE+G G P
Sbjct: 1655 GERGLRGAP 1663
Score = 65.5 bits (158), Expect = 4e-11
Identities = 34/72 (47%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQ------HGPK 104
G +G GPPG PG+PG G G GA G G GEKGD+GD G G G G +
Sbjct: 1637 GEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDR 1696
Query: 105 GEKGYPGIPPEL 116
GE G PG P L
Sbjct: 1697 GEPGPPGPPGRL 1708
Score = 65.5 bits (158), Expect = 4e-11
Identities = 34/75 (45%), Positives = 38/75 (50%), Gaps = 12/75 (16%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAK------------GEKGDKGDLGPRGER 98
G G PG PG G+PG G G+ G G G K GEKGDKG+ GP G
Sbjct: 2593 GIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPPGRP 2652
Query: 99 GQHGPKGEKGYPGIP 113
G G KGE G PG+P
Sbjct: 2653 GLAGHKGEMGEPGVP 2667
Score = 65.1 bits (157), Expect = 5e-11
Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 19/83 (22%)
Query: 50 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGP--------------- 94
RG +G PG GP G G+ G+ G +G G G+ G KGD+G+ GP
Sbjct: 1657 RGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAR 1716
Query: 95 ----RGERGQHGPKGEKGYPGIP 113
G+RGQ GP+G KG PG+P
Sbjct: 1717 EKGEPGDRGQEGPRGPKGDPGLP 1739
Score = 64.7 bits (156), Expect = 7e-11
Identities = 29/59 (49%), Positives = 35/59 (59%)
Query: 54 GPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYPGI 112
G PG PG PG PG G G GA G +G +G G G+ G +GERG GP G +G PG+
Sbjct: 1453 GAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPPGPAGSRGLPGV 1511
Score = 64.7 bits (156), Expect = 7e-11
Identities = 33/70 (47%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 51 GYQGPPGPPGP---------PGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQH 101
G G PGPPGP PG+PG G G GA G +GA G+ GD+G G G G
Sbjct: 2224 GAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLP 2283
Query: 102 GPKGEKGYPG 111
GP G KG PG
Sbjct: 2284 GPVGPKGEPG 2293
Score = 63.9 bits (154), Expect = 1e-10
Identities = 28/69 (40%), Positives = 36/69 (52%)
Query: 45 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 104
G+ G++GPPGP G PG+ G G G+ G G +G G G G GP G G G
Sbjct: 1743 GERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAGKA 1802
Query: 105 GEKGYPGIP 113
G+ G G+P
Sbjct: 1803 GDPGRDGLP 1811
Score = 63.9 bits (154), Expect = 1e-10
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 45 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 104
G G G PG PG G G G++G +G G +G KGE+G G LGP+G G GP
Sbjct: 1836 GKPGLNGKNGEPGDPGEDGRKGEKGDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPV 1895
Query: 105 GE--KGYPGIP 113
G +G+PG+P
Sbjct: 1896 GPPGQGFPGVP 1906
Score = 63.9 bits (154), Expect = 1e-10
Identities = 34/82 (41%), Positives = 40/82 (48%)
Query: 30 PQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDK 89
P T G P D G G GPPG G G G+NG+ G G G G KGD+
Sbjct: 2081 PGTPGPPGPPGPKVSVDEPGPGLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDR 2140
Query: 90 GDLGPRGERGQHGPKGEKGYPG 111
G+ GPRG+ G G GE+G G
Sbjct: 2141 GEPGPRGQDGNPGLPGERGMAG 2162
Score = 63.9 bits (154), Expect = 1e-10
Identities = 33/66 (50%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 50 RGYQGPPGP--PGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEK 107
+G++G PG PG PG PG G G+ G G GA G G G GPRGE GQ GP GE+
Sbjct: 2365 KGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGEMGQPGPSGER 2424
Query: 108 GYPGIP 113
G G P
Sbjct: 2425 GLAGPP 2430
Score = 63.2 bits (152), Expect = 2e-10
Identities = 35/85 (41%), Positives = 43/85 (50%), Gaps = 14/85 (16%)
Query: 45 GDYSFRGYQGPPGP------PGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGD------- 91
G+ +G +GPPGP PG G PG G G G TG +G KGE G GD
Sbjct: 1489 GEAGEKGERGPPGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVGPA 1548
Query: 92 -LGPRGERGQHGPKGEKGYPGIPPE 115
GP+GE+G GP G +G G+ E
Sbjct: 1549 VAGPKGEKGDVGPAGPRGATGVQGE 1573
Score = 63.2 bits (152), Expect = 2e-10
Identities = 36/87 (41%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 28 ESPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNG--ATGHEGAKGE 85
E + G P S+ G G +GP GPPGP G G G G G A G
Sbjct: 1493 EKGERGPPGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGP 1552
Query: 86 KGDKGDLGPRGERGQHGPKGEKGYPGI 112
KG+KGD+GP G RG G +GE+G PG+
Sbjct: 1553 KGEKGDVGPAGPRGATGVQGERGPPGL 1579
Score = 63.2 bits (152), Expect = 2e-10
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 16/81 (19%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKG----------------DKGDLGP 94
G +GP G G G PG G NG+ G++G +G +GE G +KG+ G
Sbjct: 1664 GVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGD 1723
Query: 95 RGERGQHGPKGEKGYPGIPPE 115
RG+ G GPKG+ G PG P E
Sbjct: 1724 RGQEGPRGPKGDPGLPGAPGE 1744
Score = 63.2 bits (152), Expect = 2e-10
Identities = 33/72 (45%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 45 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGD----LGPRGERGQ 100
G+ RG G PG GP G+ G G+ G G G G+ G KGDKGD LGP G RG
Sbjct: 2475 GEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGA 2534
Query: 101 HGPKGEKGYPGI 112
G GE+G G+
Sbjct: 2535 KGDMGERGPRGL 2546
Score = 63.2 bits (152), Expect = 2e-10
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 50 RGYQGPPGPPGPPGIPGNHGN------NGNNGATGHEGAKGEKGDKGDLGPRGERGQHGP 103
+G +G GPPG PG+ G+ G G +GA G EG G KGD+G G G +G G
Sbjct: 2640 KGDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGE 2699
Query: 104 KGEKGYPGI 112
KGE+G PGI
Sbjct: 2700 KGERGTPGI 2708
Score = 62.0 bits (149), Expect = 5e-10
Identities = 30/67 (44%), Positives = 36/67 (53%)
Query: 45 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 104
GD F G GP G G G G G G G +G++G+ G G G +GPRG G G K
Sbjct: 2683 GDRGFDGQPGPKGDQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQK 2742
Query: 105 GEKGYPG 111
GE+G PG
Sbjct: 2743 GERGPPG 2749
Score = 61.6 bits (148), Expect = 6e-10
Identities = 29/69 (42%), Positives = 37/69 (53%)
Query: 45 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 104
G+ RG +GP GP G PG+PG G G G G G +G+ G +G G +G+RG G
Sbjct: 1719 GEPGDRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLD 1778
Query: 105 GEKGYPGIP 113
G G G P
Sbjct: 1779 GRSGLDGKP 1787
Score = 61.2 bits (147), Expect = 8e-10
Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 50 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 109
RG G GP GPPG+PG G G G G G G KGD+G+ G +GE+G G +G +G
Sbjct: 1877 RGAPGILGPQGPPGLPGPVGPPGQ-GFPGVPGGTGPKGDRGETGSKGEQGLPGERGLRGE 1935
Query: 110 PGIPPEL 116
PG P +
Sbjct: 1936 PGSVPNV 1942
Score = 61.2 bits (147), Expect = 8e-10
Identities = 34/65 (52%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYP 110
G +G GPPG GIPG G G G+ G GA G KGDKGD G G GP+GE+G P
Sbjct: 2422 GERGLAGPPGREGIPGPLGPPGPPGSVGPPGASGLKGDKGDPGV----GLPGPRGERGEP 2477
Query: 111 GIPPE 115
GI E
Sbjct: 2478 GIRGE 2482
Score = 60.5 bits (145), Expect = 1e-09
Identities = 32/77 (41%), Positives = 38/77 (49%), Gaps = 14/77 (18%)
Query: 51 GYQGPPGPPGP--------------PGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRG 96
G QGP GPPG PG PG+ G G G G G KG++G G LG G
Sbjct: 1433 GPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAG 1492
Query: 97 ERGQHGPKGEKGYPGIP 113
E+G+ GP G G G+P
Sbjct: 1493 EKGERGPPGPAGSRGLP 1509
Score = 60.5 bits (145), Expect = 1e-09
Identities = 28/63 (44%), Positives = 37/63 (58%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYP 110
G +G PG GP G+ G G G++G G +G G G G +GPRG G+ G KG++G P
Sbjct: 1586 GPKGDPGDRGPIGLTGRAGPPGDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPP 1645
Query: 111 GIP 113
G P
Sbjct: 1646 GDP 1648
Score = 60.5 bits (145), Expect = 1e-09
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 11/75 (14%)
Query: 50 RGYQGPPGPPGP---------PGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQ 100
RG+ G PGP G PGI G G +GN+G+ G G G G +G G +G++G+
Sbjct: 2685 RGFDGQPGPKGDQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGE 2744
Query: 101 HGPKGEK--GYPGIP 113
GP GE+ G PG+P
Sbjct: 2745 RGPPGERVVGAPGVP 2759
Score = 60.1 bits (144), Expect = 2e-09
Identities = 30/72 (41%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 45 GDYSFRGYQGPPGPP----GPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQ 100
GD G +G G GPPG G G+ G G G +G KG +GD GD G +G +G+
Sbjct: 2508 GDVGSAGLKGDKGDSAVILGPPGPRGAKGDMGERGPRGLDGDKGPRGDNGDPGDKGSKGE 2567
Query: 101 HGPKGEKGYPGI 112
G KG G PG+
Sbjct: 2568 PGDKGSAGLPGL 2579
Score = 59.3 bits (142), Expect = 3e-09
Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 20/82 (24%)
Query: 51 GYQGPPGPPGPPG--------------------IPGNHGNNGNNGATGHEGAKGEKGDKG 90
G GP GPPGPPG +PG G G G G +G G++G +G
Sbjct: 2434 GIPGPLGPPGPPGSVGPPGASGLKGDKGDPGVGLPGPRGERGEPGIRGEDGRPGQEGPRG 2493
Query: 91 DLGPRGERGQHGPKGEKGYPGI 112
GP G RG+ G KG+ G G+
Sbjct: 2494 LTGPPGSRGERGEKGDVGSAGL 2515
Score = 58.5 bits (140), Expect = 5e-09
Identities = 30/70 (42%), Positives = 36/70 (51%)
Query: 44 HGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGP 103
+GD +G +G PG G G PG G +GN G G G G +G G GPRG G G
Sbjct: 2122 NGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPEGKPGLQGPRGPPGPVGG 2181
Query: 104 KGEKGYPGIP 113
G+ G PG P
Sbjct: 2182 HGDPGPPGAP 2191
Score = 58.5 bits (140), Expect = 5e-09
Identities = 33/66 (50%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 51 GYQGPPGPPGP---PGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEK 107
G QGP GPPGP G PG G G G G +G G KG+ G+ GP G RG GP G
Sbjct: 2168 GLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPG-RGLTGPTGAV 2226
Query: 108 GYPGIP 113
G PG P
Sbjct: 2227 GLPGPP 2232
Score = 58.2 bits (139), Expect = 7e-09
Identities = 36/89 (40%), Positives = 39/89 (43%), Gaps = 18/89 (20%)
Query: 45 GDYSFRGYQGPPGPP------------GPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDL 92
G FRG GP G P GPPG+ G G +G GA G G G G GD
Sbjct: 1746 GIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAGKAGDP 1805
Query: 93 GP------RGERGQHGPKGEKGYPGIPPE 115
G RGE+G GP G G PG P E
Sbjct: 1806 GRDGLPGLRGEQGLPGPSGPPGLPGKPGE 1834
Score = 57.8 bits (138), Expect = 9e-09
Identities = 31/72 (43%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGA---------KGEKGDKGDLGPRGERGQH 101
G +G PG PGP G PG G G G G G G KGD G GP G RG
Sbjct: 1323 GLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPGRKGDPGPSGPPGPRGPL 1382
Query: 102 GPKGEKGYPGIP 113
G G +G PG+P
Sbjct: 1383 GDPGPRGPPGLP 1394
Score = 57.8 bits (138), Expect = 9e-09
Identities = 38/95 (40%), Positives = 43/95 (45%), Gaps = 26/95 (27%)
Query: 45 GDYSFRGYQGPPGPPGPPGI------PGNHGNNGNNGATGHEGAKGEKGD---------- 88
GD RG +GP G PG PG PG G G+ G +G G +G GD
Sbjct: 1335 GDPGERGPRGPKGEPGAPGQVIGGEGPGLPGRKGDPGPSGPPGPRGPLGDPGPRGPPGLP 1394
Query: 89 ----KGDLGPRGERGQHGP------KGEKGYPGIP 113
KGD G RGERG GP GE G PG+P
Sbjct: 1395 GTAMKGDKGDRGERGPPGPGEGGIAPGEPGLPGLP 1429
Score = 57.4 bits (137), Expect = 1e-08
Identities = 29/67 (43%), Positives = 33/67 (49%)
Query: 45 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 104
GD G +GP G PG PG PG G G G G +G G +G G+ G RG G G
Sbjct: 1722 GDRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRS 1781
Query: 105 GEKGYPG 111
G G PG
Sbjct: 1782 GLDGKPG 1788
Score = 56.6 bits (135), Expect = 2e-08
Identities = 37/91 (40%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 28 ESPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKG 87
E GGL D G+ +G +G PGP G G G G G+ G G +GA G KG
Sbjct: 2311 EKGAPGGLAGDLV----GEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKG 2366
Query: 88 DKGD--LGPRGERGQHGP---KGEKGYPGIP 113
KGD +G G G GP KG+ G PG+P
Sbjct: 2367 FKGDPGVGVPGSPGPPGPPGVKGDLGLPGLP 2397
Score = 56.6 bits (135), Expect = 2e-08
Identities = 37/87 (42%), Positives = 40/87 (45%), Gaps = 26/87 (29%)
Query: 51 GYQGPP---------------------GPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDK 89
G G P GPPG GIPG G G G+ G GA G KGDK
Sbjct: 2401 GVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGIPGPLGPPGPPGSVGPPGASGLKGDK 2460
Query: 90 GD-----LGPRGERGQHGPKGEKGYPG 111
GD GPRGERG+ G +GE G PG
Sbjct: 2461 GDPGVGLPGPRGERGEPGIRGEDGRPG 2487
Score = 56.2 bits (134), Expect = 3e-08
Identities = 37/86 (43%), Positives = 41/86 (47%), Gaps = 25/86 (29%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEG--------AKGEKGD-------------- 88
G +G PG PG PG+PG G G G TG G AKGEKG
Sbjct: 2269 GDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGA 2328
Query: 89 KGDL---GPRGERGQHGPKGEKGYPG 111
KGD GPRGE+G+ G GE G PG
Sbjct: 2329 KGDRGLPGPRGEKGEAGRAGEPGDPG 2354
Score = 55.8 bits (133), Expect = 3e-08
Identities = 29/64 (45%), Positives = 33/64 (51%)
Query: 50 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 109
+G +G PGP G G G G G G+ G G G G KG GP G G+ G KGE G
Sbjct: 1479 KGDRGFPGPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGR 1538
Query: 110 PGIP 113
PG P
Sbjct: 1539 PGDP 1542
Score = 55.8 bits (133), Expect = 3e-08
Identities = 29/67 (43%), Positives = 32/67 (47%)
Query: 45 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 104
GD G +G G PGP G GN G G G G EG G +G +G GP G G GP
Sbjct: 2129 GDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPEGKPGLQGPRGPPGPVGGHGDPGPP 2188
Query: 105 GEKGYPG 111
G G G
Sbjct: 2189 GAPGLAG 2195
Score = 55.5 bits (132), Expect = 4e-08
Identities = 30/67 (44%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGER------GQHGPK 104
G G PG GP G PG G G+ G G G GEKG++G GP G R G+ G K
Sbjct: 1459 GQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAK 1518
Query: 105 GEKGYPG 111
G +G PG
Sbjct: 1519 GPEGPPG 1525
Score = 55.5 bits (132), Expect = 4e-08
Identities = 28/62 (45%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKG-EKGDKGDLGPRGERGQHGPKGEKGY 109
G QGPPG GP G PG G G+ G G +G G G++G GP G G+ G G G
Sbjct: 1985 GEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIPGL 2044
Query: 110 PG 111
PG
Sbjct: 2045 PG 2046
Score = 55.5 bits (132), Expect = 4e-08
Identities = 34/86 (39%), Positives = 42/86 (48%), Gaps = 14/86 (16%)
Query: 45 GDYSFRGYQGPPGP------PGPPGIPGNHGNNGNNGATGHEGAKGEKGD--KGDLGPRG 96
G +G +GPPGP PGPPG PG G G G +G +G GE G +G GP G
Sbjct: 2165 GKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLTGPTG 2224
Query: 97 ERGQHGPKGEKGY------PGIPPEL 116
G GP G G PG+P ++
Sbjct: 2225 AVGLPGPPGPSGLVGPQGSPGLPGQV 2250
Score = 55.5 bits (132), Expect = 4e-08
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 15/83 (18%)
Query: 44 HGDYSFRGYQGPPGPPGPPGIPGNH---------------GNNGNNGATGHEGAKGEKGD 88
+GD +G +G PG G G+PG G+ G+ G G G +GEKGD
Sbjct: 2556 NGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPGAAGIPGDPGSPGKDGVPGIRGEKGD 2615
Query: 89 KGDLGPRGERGQHGPKGEKGYPG 111
G +GPRG +G+ G KG G G
Sbjct: 2616 VGFMGPRGLKGERGVKGACGLDG 2638
Score = 55.5 bits (132), Expect = 4e-08
Identities = 30/71 (42%), Positives = 38/71 (53%)
Query: 45 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 104
GD G G G GP G PG G G+ G+ G +G G +G+KGD+G G RG G +
Sbjct: 2569 GDKGSAGLPGLRGLLGPQGQPGAAGIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGLKGER 2628
Query: 105 GEKGYPGIPPE 115
G KG G+ E
Sbjct: 2629 GVKGACGLDGE 2639
Score = 55.1 bits (131), Expect = 6e-08
Identities = 29/69 (42%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 50 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQH-------G 102
RG +G PG G G PG G G G G G +GEKGD G G +G++G G
Sbjct: 2471 RGERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPG 2530
Query: 103 PKGEKGYPG 111
P+G KG G
Sbjct: 2531 PRGAKGDMG 2539
Score = 55.1 bits (131), Expect = 6e-08
Identities = 32/78 (41%), Positives = 41/78 (52%), Gaps = 11/78 (14%)
Query: 45 GDYSFRGYQGPPGP---PGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGER--- 98
GD +G +G PG PGP G G+ G G G+ G G +G +G KG+ GP GER
Sbjct: 2695 GDQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGERVVG 2754
Query: 99 -----GQHGPKGEKGYPG 111
G G +GE+G PG
Sbjct: 2755 APGVPGAPGERGEQGRPG 2772
Score = 54.7 bits (130), Expect = 7e-08
Identities = 28/62 (45%), Positives = 33/62 (53%)
Query: 50 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 109
RG +G PG PG PG G G G G G G +G G+KGD GP G G+ G G+ G
Sbjct: 1730 RGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGA 1789
Query: 110 PG 111
G
Sbjct: 1790 AG 1791
Score = 54.7 bits (130), Expect = 7e-08
Identities = 28/67 (41%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 50 RGYQGPPGPPGPPGIPGNH---GNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGE 106
+G G PG PG G PG G G+ G G G KG++G+KG+ G G G GP G
Sbjct: 2658 KGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPGIGGFPGPSGN 2717
Query: 107 KGYPGIP 113
G G P
Sbjct: 2718 DGSAGPP 2724
Score = 54.7 bits (130), Expect = 7e-08
Identities = 29/66 (43%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEK-----GDKGDLGPRGERGQHGPKG 105
G G GPPGPPG G G G G G G GE+ G G G RGE+G+ GP G
Sbjct: 2716 GNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGERVVGAPGVPGAPGERGEQGRPGPAG 2775
Query: 106 EKGYPG 111
+G G
Sbjct: 2776 PRGEKG 2781
Score = 54.3 bits (129), Expect = 1e-07
Identities = 29/63 (46%), Positives = 31/63 (49%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYP 110
G G GP GPPG G G+ G G G G KGE+G G G RG G G G KG
Sbjct: 1462 GSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAKGPE 1521
Query: 111 GIP 113
G P
Sbjct: 1522 GPP 1524
Score = 54.3 bits (129), Expect = 1e-07
Identities = 29/68 (42%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 51 GYQGPPGPPGPPGIPGNHGNNGN-----NGATGHEGAKGEKGDKGDLGPRGERGQHGPKG 105
G GP GP GP G+ G G G G TG G G G G +GP+G G G G
Sbjct: 2192 GLAGPAGPQGPSGLKGEPGETGPPGRGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVG 2251
Query: 106 EKGYPGIP 113
E G PG P
Sbjct: 2252 ETGKPGAP 2259
Score = 53.9 bits (128), Expect = 1e-07
Identities = 27/64 (42%), Positives = 33/64 (51%)
Query: 50 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 109
RG +G G G G G G G G GH+G GE G G G G+ G GPKG++G+
Sbjct: 2628 RGVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGF 2687
Query: 110 PGIP 113
G P
Sbjct: 2688 DGQP 2691
Score = 53.1 bits (126), Expect = 2e-07
Identities = 32/81 (39%), Positives = 37/81 (45%), Gaps = 14/81 (17%)
Query: 45 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQ---- 100
GD F G G G G G PG G+ G G G GAKG +G G G +GE+G+
Sbjct: 1480 GDRGFPGPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRP 1539
Query: 101 ----------HGPKGEKGYPG 111
GPKGEKG G
Sbjct: 1540 GDPAVVGPAVAGPKGEKGDVG 1560
Score = 53.1 bits (126), Expect = 2e-07
Identities = 30/64 (46%), Positives = 33/64 (51%), Gaps = 10/64 (15%)
Query: 60 GPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPR-------GERGQHGPK---GEKGY 109
GP G G G G G G G +G KGD+GD GP+ GERG GP GE G
Sbjct: 1979 GPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGK 2038
Query: 110 PGIP 113
PGIP
Sbjct: 2039 PGIP 2042
Score = 53.1 bits (126), Expect = 2e-07
Identities = 32/78 (41%), Positives = 36/78 (46%), Gaps = 17/78 (21%)
Query: 51 GYQGPPGPPGP------PGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQ---- 100
G QG PG PG PG PG G +G +G G G G G G +GP+GE G
Sbjct: 2239 GPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAP 2298
Query: 101 -------HGPKGEKGYPG 111
G KGEKG PG
Sbjct: 2299 GQAVVGLPGAKGEKGAPG 2316
Score = 52.8 bits (125), Expect = 3e-07
Identities = 30/79 (37%), Positives = 36/79 (45%), Gaps = 10/79 (12%)
Query: 44 HGDYSFRGYQGPPGPPGPPGIPG----------NHGNNGNNGATGHEGAKGEKGDKGDLG 93
+G G +G G PGPPG PG G G+ G G G KG+ G G G
Sbjct: 1684 NGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLPGAPG 1743
Query: 94 PRGERGQHGPKGEKGYPGI 112
RG G GP G +G PG+
Sbjct: 1744 ERGIEGFRGPPGPQGDPGV 1762
Score = 52.8 bits (125), Expect = 3e-07
Identities = 31/97 (31%), Positives = 39/97 (40%), Gaps = 28/97 (28%)
Query: 45 GDYSFRGYQGPP----------------------------GPPGPPGIPGNHGNNGNNGA 76
G+ G +GP GPPGP G+ G G G G
Sbjct: 1985 GEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIPGL 2044
Query: 77 TGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYPGIP 113
G G GE G G+ G RGE+G+ G +G G PG+P
Sbjct: 2045 PGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLP 2081
Score = 52.0 bits (123), Expect = 5e-07
Identities = 33/85 (38%), Positives = 39/85 (45%), Gaps = 19/85 (22%)
Query: 29 SPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPG------PPGIPGNHGNNGNNG-----AT 77
+P GG P G G GPPGPPG P G+ G G G G A
Sbjct: 2705 TPGIGGFP--------GPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGERVVGAP 2756
Query: 78 GHEGAKGEKGDKGDLGPRGERGQHG 102
G GA GE+G++G GP G RG+ G
Sbjct: 2757 GVPGAPGERGEQGRPGPAGPRGEKG 2781
Score = 51.6 bits (122), Expect = 6e-07
Identities = 29/71 (40%), Positives = 32/71 (45%)
Query: 45 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 104
G+ RG G PG PG G+ G G G G G G G GD G G G G GP+
Sbjct: 2141 GEPGPRGQDGNPGLPGERGMAGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQ 2200
Query: 105 GEKGYPGIPPE 115
G G G P E
Sbjct: 2201 GPSGLKGEPGE 2211
Score = 50.8 bits (120), Expect = 1e-06
Identities = 27/67 (40%), Positives = 31/67 (46%)
Query: 45 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 104
G+ G +G GP G PG+ G G G G G G G G G GP+G G G
Sbjct: 2150 GNPGLPGERGMAGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEP 2209
Query: 105 GEKGYPG 111
GE G PG
Sbjct: 2210 GETGPPG 2216
Score = 50.4 bits (119), Expect = 1e-06
Identities = 29/72 (40%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 50 RGYQGPPGPPGP---PGIPGNHGNNGNNGATGHEGAKGEK---GDKGDLGPRGERGQHGP 103
+G +G PGP G PG+PG G G G G +G +G G GD GP G G GP
Sbjct: 2137 KGDRGEPGPRGQDGNPGLPGERGMAGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGP 2196
Query: 104 KGEKGYPGIPPE 115
G +G G+ E
Sbjct: 2197 AGPQGPSGLKGE 2208
Score = 50.1 bits (118), Expect = 2e-06
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 50 RGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY 109
+G +G PGPPGPPG + G +G G++G +G GP+G+ G G GE+G
Sbjct: 1693 KGDRGEPGPPGPPGRLVDTGPGARE-----KGEPGDRGQEGPRGPKGDPGLPGAPGERGI 1747
Query: 110 PGI--PP 114
G PP
Sbjct: 1748 EGFRGPP 1754
Score = 50.1 bits (118), Expect = 2e-06
Identities = 27/71 (38%), Positives = 34/71 (47%)
Query: 45 GDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK 104
G G +GP G G PG G+ G G+ G+ G G +G G +G G G G G
Sbjct: 2542 GPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPGAAGIPGDPGSP 2601
Query: 105 GEKGYPGIPPE 115
G+ G PGI E
Sbjct: 2602 GKDGVPGIRGE 2612
Score = 49.3 bits (116), Expect = 3e-06
Identities = 33/118 (27%), Positives = 44/118 (37%), Gaps = 53/118 (44%)
Query: 51 GYQGPPGPPGP--------PGIPGNHGNNGNNGATGHEGAKGEKGDKG------------ 90
G QGPPG PGP PG+PG G G+ G TG +G +G G++G
Sbjct: 1884 GPQGPPGLPGPVGPPGQGFPGVPGGTGPKGDRGETGSKGEQGLPGERGLRGEPGSVPNVD 1943
Query: 91 ---------------------------------DLGPRGERGQHGPKGEKGYPGIPPE 115
GP+G+ G+ GP G++G G P E
Sbjct: 1944 RLLETAGIKASALREIVETWDESSGSFLPVPERRRGPKGDSGEQGPPGKEGPIGFPGE 2001
Score = 48.5 bits (114), Expect = 5e-06
Identities = 30/73 (41%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 45 GDYSFRGYQGPPGPPGP------PGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGER 98
G+ G G G GP PGI G G G G G G +G G G GP+G+R
Sbjct: 1857 GEKGDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPPG-QGFPGVPGGTGPKGDR 1915
Query: 99 GQHGPKGEKGYPG 111
G+ G KGE+G PG
Sbjct: 1916 GETGSKGEQGLPG 1928
Score = 42.0 bits (97), Expect = 5e-04
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 50 RGYQGPPGPP--GPPGIPGNHGNNGNNGATGHEGAKGEKGD 88
+G +GPPG G PG+PG G G G G G +GEKG+
Sbjct: 2742 KGERGPPGERVVGAPGVPGAPGERGEQGRPGPAGPRGEKGE 2782
Score = 41.2 bits (95), Expect = 8e-04
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 59 PGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPK----GEKGYPG 111
P P G G++G G G EG G G++G G RG+ G GP GE+G PG
Sbjct: 1972 PVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPG 2028
Score = 35.4 bits (80), Expect = 0.046
Identities = 30/117 (25%), Positives = 35/117 (29%), Gaps = 39/117 (33%)
Query: 34 GLPPDCSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGA----------- 82
GLP G G GP G G G G G G G G G+
Sbjct: 1890 GLPGPVGPPGQGFPGVPGGTGPKGDRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETA 1949
Query: 83 ----------------------------KGEKGDKGDLGPRGERGQHGPKGEKGYPG 111
+G KGD G+ GP G+ G G GE+G G
Sbjct: 1950 GIKASALREIVETWDESSGSFLPVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKG 2006
>gi|38372917 C1q and tumor necrosis factor related protein 1 isoform
1 [Homo sapiens]
Length = 281
Score = 79.0 bits (193), Expect = 4e-15
Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 12/226 (5%)
Query: 23 QDEYMESPQTGGLPPD-CSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEG 81
Q E Q GLP C +CC S P + G G+ G+ G G G
Sbjct: 56 QHEKYRPSQDQGLPASRCLRCCDPGTSMYPATAVP-QINITILKGEKGDRGDRGLQGKYG 114
Query: 82 AKGEKGDKGDLGPRGERGQHGPKGEKGYPGIPPELQIAFMASLATHFSNQNSGIIFSSVE 141
G G +G GP+G++G G GE+ + H ++ +IF +
Sbjct: 115 KTGSAGARGHTGPKGQKGSMGAPGERCKSHY---AAFSVGRKKPMHSNHYYQTVIFDTEF 171
Query: 142 TNIGNFFDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKS 201
N+ + F++ TG+F V G+YFF+ ++ +E Y+++M N V +++ ++ +S
Sbjct: 172 VNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQ-KETYLHIMKNEEEVVILFA-QVGDRS 229
Query: 202 DTSSNHAVLKLAKGDEVWLRM-----GNGALHGDHQRFSTFAGFLL 242
S +L+L + D+VW+R+ N + + TF+G+L+
Sbjct: 230 IMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLV 275
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.140 0.453
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,655,487
Number of Sequences: 37866
Number of extensions: 755345
Number of successful extensions: 26805
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 121
Number of HSP's that attempted gapping in prelim test: 3921
Number of HSP's gapped (non-prelim): 8098
length of query: 246
length of database: 18,247,518
effective HSP length: 100
effective length of query: 146
effective length of database: 14,460,918
effective search space: 2111294028
effective search space used: 2111294028
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.