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Search of human proteins with 58801559
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|58801559 complement component 1, q subcomponent-like 3 [Homo
sapiens]
(255 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|58801559 complement component 1, q subcomponent-like 3 [Homo ... 535 e-152
gi|5729785 complement component 1, q subcomponent-like 1 [Homo s... 405 e-113
gi|154937344 complement component 1, q subcomponent-like 2 [Homo... 375 e-104
gi|56606142 complement component 1, q subcomponent-like 4 [Homo ... 348 2e-96
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] 131 7e-31
gi|13994280 C1q and tumor necrosis factor related protein 7 isof... 128 6e-30
gi|206597454 C1q and tumor necrosis factor related protein 7 iso... 128 6e-30
gi|206597452 C1q and tumor necrosis factor related protein 7 iso... 128 6e-30
gi|94818738 C1q and tumor necrosis factor related protein 2 [Hom... 128 6e-30
gi|87298828 complement component 1, q subcomponent, B chain prec... 126 2e-29
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] 126 2e-29
gi|4757760 adiponectin precursor [Homo sapiens] 126 2e-29
gi|56847616 C1q and tumor necrosis factor related protein 9B [Ho... 124 8e-29
gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens] 124 8e-29
gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens] 124 8e-29
gi|65301115 C1q and tumor necrosis factor related protein 9 [Hom... 124 1e-28
gi|122937273 hypothetical protein LOC131149 [Homo sapiens] 114 6e-26
gi|56786155 complement component 1, q subcomponent, C chain prec... 113 1e-25
gi|166235903 complement component 1, q subcomponent, C chain pre... 113 1e-25
gi|14149712 C1q and tumor necrosis factor related protein 5 prec... 112 3e-25
gi|7705753 complement component 1, q subcomponent, A chain precu... 110 9e-25
gi|13569919 C1q and tumor necrosis factor related protein 3 isof... 109 2e-24
gi|62739183 C1q and tumor necrosis factor related protein 3 isof... 109 2e-24
gi|5901944 elastin microfibril interfacer 1 [Homo sapiens] 104 9e-23
gi|32967300 C1q and tumor necrosis factor related protein 6 [Hom... 86 2e-17
gi|32967294 C1q and tumor necrosis factor related protein 6 [Hom... 86 2e-17
gi|38372917 C1q and tumor necrosis factor related protein 1 isof... 86 4e-17
gi|13569944 C1q and tumor necrosis factor related protein 1 isof... 86 4e-17
gi|116686136 C1q and tumor necrosis factor related protein 8 [Ho... 84 2e-16
gi|50428933 C1q domain containing 1 isoform 1 [Homo sapiens] 83 3e-16
>gi|58801559 complement component 1, q subcomponent-like 3 [Homo
sapiens]
Length = 255
Score = 535 bits (1379), Expect = e-152
Identities = 255/255 (100%), Positives = 255/255 (100%)
Query: 1 MVLLLVILIPVLVSSAGTSAHYEMLGTCRMVCDPYGGTKAPSTAATPDRGLMQSLPTFIQ 60
MVLLLVILIPVLVSSAGTSAHYEMLGTCRMVCDPYGGTKAPSTAATPDRGLMQSLPTFIQ
Sbjct: 1 MVLLLVILIPVLVSSAGTSAHYEMLGTCRMVCDPYGGTKAPSTAATPDRGLMQSLPTFIQ 60
Query: 61 GPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAAGAISAAT 120
GPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAAGAISAAT
Sbjct: 61 GPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAAGAISAAT 120
Query: 121 YSTVPKIAFYAGLKRQHEGYEVLKFDDVVTNLGNHYDPTTGKFTCSIPGIYFFTYHVLMR 180
YSTVPKIAFYAGLKRQHEGYEVLKFDDVVTNLGNHYDPTTGKFTCSIPGIYFFTYHVLMR
Sbjct: 121 YSTVPKIAFYAGLKRQHEGYEVLKFDDVVTNLGNHYDPTTGKFTCSIPGIYFFTYHVLMR 180
Query: 181 GGDGTSMWADLCKNNQVRASAIAQDADQNYDYASNSVVLHLEPGDEVYIKLDGGKAHGGN 240
GGDGTSMWADLCKNNQVRASAIAQDADQNYDYASNSVVLHLEPGDEVYIKLDGGKAHGGN
Sbjct: 181 GGDGTSMWADLCKNNQVRASAIAQDADQNYDYASNSVVLHLEPGDEVYIKLDGGKAHGGN 240
Query: 241 NNKYSTFSGFIIYAD 255
NNKYSTFSGFIIYAD
Sbjct: 241 NNKYSTFSGFIIYAD 255
>gi|5729785 complement component 1, q subcomponent-like 1 [Homo
sapiens]
Length = 258
Score = 405 bits (1042), Expect = e-113
Identities = 194/262 (74%), Positives = 216/262 (82%), Gaps = 11/262 (4%)
Query: 1 MVLLLVILIPVLVSSAGTSAHYEMLGTCRMVCDPYGGTKAPSTAATPDRGLMQSLP---- 56
M+L+LV+LIPVLVSS G HYEMLGTCRMVCDPY + P A D G S
Sbjct: 1 MLLVLVVLIPVLVSSGGPEGHYEMLGTCRMVCDPYPA-RGPGAGARTDGGDALSEQSGAP 59
Query: 57 ---TFIQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAA 113
T +QGP+G+ GR GK GP GPPG+PGPPGP+GPPGEKGEPG+ PGPPG PG +
Sbjct: 60 PPSTLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGK---PGPPGLPGAGGS 116
Query: 114 GAISAATYSTVPKIAFYAGLKRQHEGYEVLKFDDVVTNLGNHYDPTTGKFTCSIPGIYFF 173
GAIS ATY+TVP++AFYAGLK HEGYEVLKFDDVVTNLGN+YD +GKFTC+IPG YFF
Sbjct: 117 GAISTATYTTVPRVAFYAGLKNPHEGYEVLKFDDVVTNLGNNYDAASGKFTCNIPGTYFF 176
Query: 174 TYHVLMRGGDGTSMWADLCKNNQVRASAIAQDADQNYDYASNSVVLHLEPGDEVYIKLDG 233
TYHVLMRGGDGTSMWADLCKN QVRASAIAQDADQNYDYASNSV+LHL+ GDEV+IKLDG
Sbjct: 177 TYHVLMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVILHLDAGDEVFIKLDG 236
Query: 234 GKAHGGNNNKYSTFSGFIIYAD 255
GKAHGGN+NKYSTFSGFIIY+D
Sbjct: 237 GKAHGGNSNKYSTFSGFIIYSD 258
>gi|154937344 complement component 1, q subcomponent-like 2 [Homo
sapiens]
Length = 287
Score = 375 bits (963), Expect = e-104
Identities = 193/290 (66%), Positives = 218/290 (75%), Gaps = 38/290 (13%)
Query: 1 MVLLLVILIPVLVSSAGT-SAHYEMLGTCRMVCDPYG--------GTKA----PSTAATP 47
M L L+I +P+L+ +A +AHYEM+GTCRM+CDPY G KA PSTAA
Sbjct: 1 MALGLLIAVPLLLQAAPRGAAHYEMMGTCRMICDPYTAAPGGEPPGAKAQPPGPSTAALE 60
Query: 48 DRGLMQSL-----PTFIQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLP 102
+MQ L P FIQGPKG+ GRPGK GPRGPPGEPGPPGP GPPGEKG+ GR GLP
Sbjct: 61 ---VMQDLSANPPPPFIQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLP 117
Query: 103 GPP-------------GAPGL--NAAGAISAATYSTV--PKIAFYAGLKRQHEGYEVLKF 145
G G G+ ++ G +++A +T PKIAFY GLK HEGYEVLKF
Sbjct: 118 GLQLTAGTASGVGVVGGGAGVGGDSEGEVTSALSATFSGPKIAFYVGLKSPHEGYEVLKF 177
Query: 146 DDVVTNLGNHYDPTTGKFTCSIPGIYFFTYHVLMRGGDGTSMWADLCKNNQVRASAIAQD 205
DDVVTNLGNHYDPTTGKF+C + GIYFFTYH+LMRGGDGTSMWADLCKN QVRASAIAQD
Sbjct: 178 DDVVTNLGNHYDPTTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQD 237
Query: 206 ADQNYDYASNSVVLHLEPGDEVYIKLDGGKAHGGNNNKYSTFSGFIIYAD 255
ADQNYDYASNSVVLHL+ GDEVY+KLDGGKAHGGNNNKYSTFSGF++Y D
Sbjct: 238 ADQNYDYASNSVVLHLDSGDEVYVKLDGGKAHGGNNNKYSTFSGFLLYPD 287
>gi|56606142 complement component 1, q subcomponent-like 4 [Homo
sapiens]
Length = 238
Score = 348 bits (894), Expect = 2e-96
Identities = 179/255 (70%), Positives = 197/255 (77%), Gaps = 17/255 (6%)
Query: 1 MVLLLVILIPVLVSSAGTSAHYEMLGTCRMVCDPYGGTKAPSTAATPDRGLMQSLPTFIQ 60
MVLLL++ IP+LV S+ AHYEMLG CRMVCDP+G + P PD G S+P F
Sbjct: 1 MVLLLLVAIPLLVHSSRGPAHYEMLGRCRMVCDPHG-PRGPG----PD-GAPASVPPFPP 54
Query: 61 GPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAAGAISAAT 120
G KGE GR GKAG RGPPG PPGP GPPGE PGR PGPPG PG G AA
Sbjct: 55 GAKGEVGRRGKAGLRGPPG---PPGPRGPPGE---PGR---PGPPGPPGPGPGGVAPAAG 105
Query: 121 YSTVPKIAFYAGLKRQHEGYEVLKFDDVVTNLGNHYDPTTGKFTCSIPGIYFFTYHVLMR 180
Y VP+IAFYAGL+R HEGYEVL+FDDVVTN+GN Y+ +GKFTC +PG+YFF YHVLMR
Sbjct: 106 Y--VPRIAFYAGLRRPHEGYEVLRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLMR 163
Query: 181 GGDGTSMWADLCKNNQVRASAIAQDADQNYDYASNSVVLHLEPGDEVYIKLDGGKAHGGN 240
GGDGTSMWADL KN QVRASAIAQDADQNYDYASNSV+LHL+ GDEV+IKLDGGK HGGN
Sbjct: 164 GGDGTSMWADLMKNGQVRASAIAQDADQNYDYASNSVILHLDVGDEVFIKLDGGKVHGGN 223
Query: 241 NNKYSTFSGFIIYAD 255
NKYSTFSGFIIY D
Sbjct: 224 TNKYSTFSGFIIYPD 238
>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
Length = 680
Score = 131 bits (329), Expect = 7e-31
Identities = 81/230 (35%), Positives = 113/230 (49%), Gaps = 40/230 (17%)
Query: 60 QGPKGEAGRPGKAGPRGPPGEPGPPGPMG--------------PPGEKGEPGRQGLPGPP 105
+GP G G PG G +G PG PGPPGP G PPG +G G GLPGPP
Sbjct: 451 RGPIGPPGIPGFPGSKGDPGSPGPPGPAGIATKGLNGPTGPPGPPGPRGHSGEPGLPGPP 510
Query: 106 GAPG-------------------LNAAGAISAATYST-VPKIAFYAGLKRQHEGYEV-LK 144
G PG L+ +SA T +P AF L + + +
Sbjct: 511 GPPGPPGQAVMPEGFIKAGQRPSLSGTPLVSANQGVTGMPVSAFTVILSKAYPAIGTPIP 570
Query: 145 FDDVVTNLGNHYDPTTGKFTCSIPGIYFFTYHVLMRGGDGTSMWADLCKNNQVRASAIAQ 204
FD ++ N HYDP TG FTC IPGIY+F+YHV ++ GT +W L KN +
Sbjct: 571 FDKILYNRQQHYDPRTGIFTCQIPGIYYFSYHVHVK---GTHVWVGLYKNGTPVMYTYDE 627
Query: 205 DADQNYDYASNSVVLHLEPGDEVYIKLDGGKAHGGNNNKY--STFSGFII 252
D AS S ++ L D+V+++L +++G +++Y S+FSGF++
Sbjct: 628 YTKGYLDQASGSAIIDLTENDQVWLQLPNAESNGLYSSEYVHSSFSGFLV 677
Score = 65.9 bits (159), Expect = 3e-11
Identities = 31/52 (59%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 63 KGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAAG 114
+GE G PG GP GP G PGP GP G PG G PG QG PG PG PG +A G
Sbjct: 56 RGEQGTPGPPGPAGPRGHPGPSGPPGKPG-YGSPGLQGEPGLPGPPGPSAVG 106
Score = 65.5 bits (158), Expect = 4e-11
Identities = 29/52 (55%), Positives = 32/52 (61%)
Query: 59 IQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGL 110
+ GPKG G PG G G G PG PGP+GP G KG PG G GP GAPG+
Sbjct: 396 LDGPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGAPGI 447
Score = 63.9 bits (154), Expect = 1e-10
Identities = 32/71 (45%), Positives = 35/71 (49%), Gaps = 17/71 (23%)
Query: 61 GPKGEAGRPGKAGPRGPPGEPGPPGPMGP-----------------PGEKGEPGRQGLPG 103
G KG+ G PG+ GP GPPG GPPG GP PG KG PG G+ G
Sbjct: 232 GIKGDRGFPGEMGPIGPPGPQGPPGERGPEGIGKPGAAGAPGQPGIPGTKGLPGAPGIAG 291
Query: 104 PPGAPGLNAAG 114
PPG PG G
Sbjct: 292 PPGPPGFGKPG 302
Score = 63.2 bits (152), Expect = 2e-10
Identities = 32/59 (54%), Positives = 36/59 (61%), Gaps = 7/59 (11%)
Query: 59 IQGPKGEAGRPGKAGPRGPPGEPGPPGP--MGPPGEKGEPGRQGLPGP-----PGAPGL 110
++G +G G PG AGPRG PG GPPG G PG +GEPG G PGP PG PGL
Sbjct: 55 VRGEQGTPGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGPSAVGKPGVPGL 113
Score = 63.2 bits (152), Expect = 2e-10
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 61 GPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGE---PGRQGLPGPPGAPGLN 111
GP+G G PG G GP GE GP GP G PG KGE PG G PG PG PGL+
Sbjct: 344 GPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSDGKPGYPGKPGLD 397
Score = 62.0 bits (149), Expect = 5e-10
Identities = 31/58 (53%), Positives = 35/58 (60%), Gaps = 8/58 (13%)
Query: 60 QGPKGEAGRPGKAGPRGPPGEPGP---PGPMGPPGEK-----GEPGRQGLPGPPGAPG 109
+G G G+PG G RG PGE GP PGP GPPGE+ G+PG G PG PG PG
Sbjct: 222 RGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEGIGKPGAAGAPGQPGIPG 279
Score = 61.2 bits (147), Expect = 8e-10
Identities = 31/56 (55%), Positives = 34/56 (60%), Gaps = 6/56 (10%)
Query: 60 QGPKGEAGRPGKAGPRGP---PGEPG---PPGPMGPPGEKGEPGRQGLPGPPGAPG 109
+GP G G PG G +GP PG+PG PPG MGP G KG PG GLPGP G G
Sbjct: 310 RGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKGETG 365
Score = 60.8 bits (146), Expect = 1e-09
Identities = 28/50 (56%), Positives = 29/50 (58%)
Query: 61 GPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGL 110
GP G AG PG G RG PG G PG G PG G G GLPGP G PG+
Sbjct: 365 GPAGPAGYPGAKGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGV 414
Score = 60.5 bits (145), Expect = 1e-09
Identities = 31/58 (53%), Positives = 34/58 (58%), Gaps = 8/58 (13%)
Query: 61 GPKGE---AGRPGKAGPRGPPGEPGP-----PGPMGPPGEKGEPGRQGLPGPPGAPGL 110
GPKG+ AG PG GP GPPG PGP PG G G G PG +G PG GAPG+
Sbjct: 124 GPKGDVGPAGLPGPRGPPGPPGIPGPAGISVPGKPGQQGPTGAPGPRGFPGEKGAPGV 181
Score = 60.5 bits (145), Expect = 1e-09
Identities = 28/56 (50%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 56 PTFIQGPKGEAGRPGKAGPRG--PPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPG 109
P + GP+G G PG GP G PG+PG GP G PG +G PG +G PG PG G
Sbjct: 131 PAGLPGPRGPPGPPGIPGPAGISVPGKPGQQGPTGAPGPRGFPGEKGAPGVPGMNG 186
Score = 60.1 bits (144), Expect = 2e-09
Identities = 31/61 (50%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 56 PTFIQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPG-LNAAG 114
P G KGE G PG G G PG+PG GP G PG G G G+ GPPG PG + AG
Sbjct: 369 PAGYPGAKGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGVGGPPGLPGPVGPAG 428
Query: 115 A 115
A
Sbjct: 429 A 429
Score = 59.3 bits (142), Expect = 3e-09
Identities = 28/54 (51%), Positives = 31/54 (57%)
Query: 60 QGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAA 113
+G +G AG PGK G GPPG GP GP G PG G PG +G GP G G A
Sbjct: 322 KGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYPGA 375
Score = 57.8 bits (138), Expect = 9e-09
Identities = 27/50 (54%), Positives = 29/50 (58%)
Query: 61 GPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGL 110
G G+ G PGK G GP G PG PGP G PG G PG G GP GA G+
Sbjct: 383 GSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGM 432
Score = 57.0 bits (136), Expect = 2e-08
Identities = 28/54 (51%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 61 GPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGP-----PGAPG 109
G G G PGK G RGP G G GP G PG +G PG G+PGP PG PG
Sbjct: 106 GKPGVPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGISVPGKPG 159
Score = 56.6 bits (135), Expect = 2e-08
Identities = 29/58 (50%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 61 GPKGEAGRPGKAGPRGPPGEPGP---PGPMGPPGEKGEPGRQGL--PGPPGAPGLNAA 113
G G G+PG+ GP GP G+ GP PGP GPPG G PG G+ PG PG G A
Sbjct: 109 GVPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGISVPGKPGQQGPTGA 166
Score = 56.2 bits (134), Expect = 3e-08
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 61 GPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQ-----GLPGPPGAPG 109
G +GE G PG+ G +G G PG GP+GPPG +G PG + G PG GAPG
Sbjct: 220 GKRGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEGIGKPGAAGAPG 273
Score = 55.8 bits (133), Expect = 3e-08
Identities = 30/75 (40%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 59 IQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGE--------PGRQGLPGPPGAPGL 110
+ G G+ G G GPRG PGE G PG G G+KGE PG +GLPGP G G
Sbjct: 154 VPGKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYGAPGRPGERGLPGPQGPTGP 213
Query: 111 NAAGAISAATYSTVP 125
+ + + VP
Sbjct: 214 SGPPGVGKRGENGVP 228
Score = 55.8 bits (133), Expect = 3e-08
Identities = 32/60 (53%), Positives = 33/60 (55%), Gaps = 8/60 (13%)
Query: 59 IQGPKGEAGRPGKAGPRGPPG--EPGPPG------PMGPPGEKGEPGRQGLPGPPGAPGL 110
I G KG G PG AGP GPPG +PG PG P G PG G G QG G PG PGL
Sbjct: 277 IPGTKGLPGAPGIAGPPGPPGFGKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKPGL 336
Score = 55.5 bits (132), Expect = 5e-08
Identities = 29/65 (44%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 61 GPKGEAGRPGKAGPR--------GPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNA 112
G +GE G PG GP G PG+PG GP GP G+ G G G GPPG PG+
Sbjct: 89 GLQGEPGLPGPPGPSAVGKPGVPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPG 148
Query: 113 AGAIS 117
IS
Sbjct: 149 PAGIS 153
Score = 55.5 bits (132), Expect = 5e-08
Identities = 33/79 (41%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 36 GGTKAPSTAATPDRGLMQSLPTFIQGPKG-----EAGRPGKAGPRGPPGEPGPPGPMGPP 90
G AP P + P I GP G + G PG G RGP G PG PG G
Sbjct: 267 GAAGAPGQPGIPGTKGLPGAPG-IAGPPGPPGFGKPGLPGLKGERGPAGLPGGPGAKGEQ 325
Query: 91 GEKGEPGRQGLPGPPGAPG 109
G G PG+ GL GPPG G
Sbjct: 326 GPAGLPGKPGLTGPPGNMG 344
Score = 55.1 bits (131), Expect = 6e-08
Identities = 28/58 (48%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 56 PTFIQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGE---PGRQGLPGPPGAPGL 110
P I G G G G+ GP GP G PG G G PG G+ PG+ GL GP G PGL
Sbjct: 348 PKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSDGKPGYPGKPGLDGPKGNPGL 405
Score = 50.4 bits (119), Expect = 1e-06
Identities = 31/76 (40%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 59 IQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAAGAISA 118
+ G KGE G G G G GE GP G G PG G PG G GP G PG +
Sbjct: 303 LPGLKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKG 362
Query: 119 ATYSTVPKIAFYAGLK 134
T P A Y G K
Sbjct: 363 ETGPAGP--AGYPGAK 376
Score = 38.5 bits (88), Expect = 0.006
Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 9/41 (21%)
Query: 75 RGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAAGA 115
RG G PGPPGP GP G PGP G PG G+
Sbjct: 56 RGEQGTPGPPGPAGPRGH---------PGPSGPPGKPGYGS 87
>gi|13994280 C1q and tumor necrosis factor related protein 7 isoform
b [Homo sapiens]
Length = 289
Score = 128 bits (321), Expect = 6e-30
Identities = 78/204 (38%), Positives = 107/204 (52%), Gaps = 18/204 (8%)
Query: 56 PTFIQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAAGA 115
P + G KG+ G GK GP GP GE G GP+GPPG KG+ G Q G PG PG+ G+
Sbjct: 87 PLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQ---GDPGLPGVCRCGS 143
Query: 116 ISAATYSTVPKIAFYAGLKRQH-EGYEVLKFDDVVTNLGNHYDPTTGKFTCSIPGIYFFT 174
I V K AF G+ + E + F+ V+ N G HY+P TGKF C+ PGIY+F+
Sbjct: 144 I-------VLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFS 196
Query: 175 YHVLMRGGDGTSMWADLCKNNQVRASAIAQDADQNYDYASNSVVLHLEPGDEVYIKL--- 231
Y + + + L N Q R + N+D AS S V++L+P DEV++++
Sbjct: 197 YDITLA---NKHLAIGLVHNGQYRIKTFDANTG-NHDVASGSTVIYLQPEDEVWLEIFFT 252
Query: 232 DGGKAHGGNNNKYSTFSGFIIYAD 255
D S FSGF++Y D
Sbjct: 253 DQNGLFSDPGWADSLFSGFLLYVD 276
Score = 42.0 bits (97), Expect = 5e-04
Identities = 21/48 (43%), Positives = 23/48 (47%)
Query: 62 PKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPG 109
P+G + PR PG PGP GPPG G PG G G PG G
Sbjct: 18 PRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDG 65
>gi|206597454 C1q and tumor necrosis factor related protein 7
isoform b [Homo sapiens]
Length = 289
Score = 128 bits (321), Expect = 6e-30
Identities = 78/204 (38%), Positives = 107/204 (52%), Gaps = 18/204 (8%)
Query: 56 PTFIQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAAGA 115
P + G KG+ G GK GP GP GE G GP+GPPG KG+ G Q G PG PG+ G+
Sbjct: 87 PLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQ---GDPGLPGVCRCGS 143
Query: 116 ISAATYSTVPKIAFYAGLKRQH-EGYEVLKFDDVVTNLGNHYDPTTGKFTCSIPGIYFFT 174
I V K AF G+ + E + F+ V+ N G HY+P TGKF C+ PGIY+F+
Sbjct: 144 I-------VLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFS 196
Query: 175 YHVLMRGGDGTSMWADLCKNNQVRASAIAQDADQNYDYASNSVVLHLEPGDEVYIKL--- 231
Y + + + L N Q R + N+D AS S V++L+P DEV++++
Sbjct: 197 YDITLA---NKHLAIGLVHNGQYRIKTFDANTG-NHDVASGSTVIYLQPEDEVWLEIFFT 252
Query: 232 DGGKAHGGNNNKYSTFSGFIIYAD 255
D S FSGF++Y D
Sbjct: 253 DQNGLFSDPGWADSLFSGFLLYVD 276
Score = 42.0 bits (97), Expect = 5e-04
Identities = 21/48 (43%), Positives = 23/48 (47%)
Query: 62 PKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPG 109
P+G + PR PG PGP GPPG G PG G G PG G
Sbjct: 18 PRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDG 65
>gi|206597452 C1q and tumor necrosis factor related protein 7
isoform a [Homo sapiens]
Length = 296
Score = 128 bits (321), Expect = 6e-30
Identities = 78/204 (38%), Positives = 107/204 (52%), Gaps = 18/204 (8%)
Query: 56 PTFIQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAAGA 115
P + G KG+ G GK GP GP GE G GP+GPPG KG+ G Q G PG PG+ G+
Sbjct: 94 PLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQ---GDPGLPGVCRCGS 150
Query: 116 ISAATYSTVPKIAFYAGLKRQH-EGYEVLKFDDVVTNLGNHYDPTTGKFTCSIPGIYFFT 174
I V K AF G+ + E + F+ V+ N G HY+P TGKF C+ PGIY+F+
Sbjct: 151 I-------VLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFS 203
Query: 175 YHVLMRGGDGTSMWADLCKNNQVRASAIAQDADQNYDYASNSVVLHLEPGDEVYIKL--- 231
Y + + + L N Q R + N+D AS S V++L+P DEV++++
Sbjct: 204 YDITLA---NKHLAIGLVHNGQYRIKTFDANTG-NHDVASGSTVIYLQPEDEVWLEIFFT 259
Query: 232 DGGKAHGGNNNKYSTFSGFIIYAD 255
D S FSGF++Y D
Sbjct: 260 DQNGLFSDPGWADSLFSGFLLYVD 283
Score = 42.0 bits (97), Expect = 5e-04
Identities = 21/48 (43%), Positives = 23/48 (47%)
Query: 62 PKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPG 109
P+G + PR PG PGP GPPG G PG G G PG G
Sbjct: 25 PRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDG 72
>gi|94818738 C1q and tumor necrosis factor related protein 2 [Homo
sapiens]
Length = 330
Score = 128 bits (321), Expect = 6e-30
Identities = 75/201 (37%), Positives = 107/201 (53%), Gaps = 22/201 (10%)
Query: 61 GPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAA---GAIS 117
GPKG+AG G+AGPRGP G G PG G PG+KG G++G PG PG + A S
Sbjct: 139 GPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGPCSCGSGHTKSAFS 198
Query: 118 AATYSTVPKIAFYAGLKRQHEGYEVLKFDDVVTNLGNHYDPTTGKFTCSIPGIYFFTYHV 177
A + P+ +KFD ++ N G HY+ ++GKF C +PGIY+FTY +
Sbjct: 199 VAVTKSYPRERL------------PIKFDKILMNEGGHYNASSGKFVCGVPGIYYFTYDI 246
Query: 178 LMRGGDGTSMWADLCKNNQVRASAIAQDADQNYDYASNSVVLHLEPGDEVYIKLDGGKAH 237
+ + L N Q R + N+D AS S +L L+ GDEV++++ + +
Sbjct: 247 TLA---NKHLAIGLVHNGQYRIRTFDANTG-NHDVASGSTILALKQGDEVWLQIFYSEQN 302
Query: 238 GGNNNKY---STFSGFIIYAD 255
G + Y S F+GF+IYAD
Sbjct: 303 GLFYDPYWTDSLFTGFLIYAD 323
>gi|87298828 complement component 1, q subcomponent, B chain
precursor [Homo sapiens]
Length = 253
Score = 126 bits (317), Expect = 2e-29
Identities = 82/217 (37%), Positives = 106/217 (48%), Gaps = 45/217 (20%)
Query: 61 GPKGEAGRPGKAGPRGP---------PGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLN 111
G KGE G PG AG G PG PG GP GP G KG PG G PGP G G
Sbjct: 57 GIKGEKGLPGLAGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESG-- 114
Query: 112 AAGAISAATYSTVPKIAFYA------GLKRQHEGYEVLKFDDVVTNLGNHYDPTTGKFTC 165
Y KIAF A L+R + ++FD V+TN+ N+Y+P +GKFTC
Sbjct: 115 --------DYKATQKIAFSATRTINVPLRRD----QTIRFDHVITNMNNNYEPRSGKFTC 162
Query: 166 SIPGIYFFTYHVLMRGGDGTSMWADLCKNNQVRASAIAQDADQNYDYASNS-------VV 218
+PG+Y+FTYH RG +LC N +R AQ DYA N+ +V
Sbjct: 163 KVPGLYYFTYHASSRG--------NLCV-NLMRGRERAQKVVTFCDYAYNTFQVTTGGMV 213
Query: 219 LHLEPGDEVYIKLDGGKAHGGNNNKYSTFSGFIIYAD 255
L LE G+ V+++ + G S FSGF+++ D
Sbjct: 214 LKLEQGENVFLQATDKNSLLGMEGANSIFSGFLLFPD 250
>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
Length = 703
Score = 126 bits (317), Expect = 2e-29
Identities = 84/218 (38%), Positives = 112/218 (51%), Gaps = 29/218 (13%)
Query: 59 IQGPKGE--AGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPG---PPGAPGLNAA 113
+ GP GE AG PG AGP GPPG PG PG GPPG G PG G PG G GL+
Sbjct: 488 LPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDETGIAGLHLP 547
Query: 114 -GAISAATYSTVPKIAFYAGLKRQH---------------EGYEVLKFDDVVTNLGNHYD 157
G + A K F G H G V KFD + N + Y+
Sbjct: 548 NGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPV-KFDRTLYNGHSGYN 606
Query: 158 PTTGKFTCSIPGIYFFTYHVLMRGGDGTSMWADLCKNNQVRASAIAQDADQNY-DYASNS 216
P TG FTC + G+Y+F YHV ++ GT++W L KNN V A+ + + Y D AS
Sbjct: 607 PATGIFTCPVGGVYYFAYHVHVK---GTNVWVALYKNN-VPATYTYDEYKKGYLDQASGG 662
Query: 217 VVLHLEPGDEVYIKLDGGKAHGGNNNKY--STFSGFII 252
VL L P D+V++++ +A+G + +Y S+FSGF++
Sbjct: 663 AVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSFSGFLL 700
Score = 68.6 bits (166), Expect = 5e-12
Identities = 49/138 (35%), Positives = 57/138 (41%), Gaps = 24/138 (17%)
Query: 3 LLLVILIPVL-----VSSAGTSAHYEMLGTCRMVCDPYGGTKAPSTAATPDRGLMQSLPT 57
LLL++L+ VL SS G + + + G P + L LP
Sbjct: 11 LLLLLLVLVLGCGPRASSGGGAGGAAGYAPVKYIQPMQKGPVGPPFREGKGQYLEMPLPL 70
Query: 58 FIQGPKGEAGRPGKAGPRGPPGEP--------------GPPGPMGPP-----GEKGEPGR 98
KGE G PGK GPRGPPG P G PGP GPP G+ G PG
Sbjct: 71 LPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGL 130
Query: 99 QGLPGPPGAPGLNAAGAI 116
G GPPG PGL I
Sbjct: 131 PGKVGPPGQPGLRGEPGI 148
Score = 65.1 bits (157), Expect = 6e-11
Identities = 31/50 (62%), Positives = 32/50 (64%)
Query: 60 QGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPG 109
QGP G AG+PG G RG PG GPPGP GP GE G GR G PG GA G
Sbjct: 396 QGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALG 445
Score = 63.2 bits (152), Expect = 2e-10
Identities = 28/49 (57%), Positives = 31/49 (63%)
Query: 61 GPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPG 109
G G AG PG+ GP GP GE GP GP G PG +G+ G GL G PG PG
Sbjct: 361 GLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPG 409
Score = 62.8 bits (151), Expect = 3e-10
Identities = 33/70 (47%), Positives = 36/70 (51%), Gaps = 14/70 (20%)
Query: 61 GPKGEAGRPGKAGPRGPPGEPGPPGPMG--------------PPGEKGEPGRQGLPGPPG 106
G +GE G G G RGPPG PG PGP G PPG +GEPG QG PGPPG
Sbjct: 141 GLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPG 200
Query: 107 APGLNAAGAI 116
GL +
Sbjct: 201 DRGLKGDNGV 210
Score = 61.2 bits (147), Expect = 8e-10
Identities = 38/85 (44%), Positives = 41/85 (48%), Gaps = 16/85 (18%)
Query: 37 GTKAPSTAATPDRGLMQSLPTFIQGPKGE---AGRPGKAGPRGPPGEPGPPGPMGP---- 89
GT+ P P M LP GPKG+ AG PG G RG PGE G PG GP
Sbjct: 302 GTRGPPGLIGPTGYGMPGLP----GPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLG 357
Query: 90 -----PGEKGEPGRQGLPGPPGAPG 109
PG G PGR+G PGP G G
Sbjct: 358 GPPGLPGSAGLPGRRGPPGPKGEAG 382
Score = 60.8 bits (146), Expect = 1e-09
Identities = 33/79 (41%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 37 GTKAPSTAATPDRGLMQSLPTFIQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEP 96
G P P +G P + GP G G+PG G G PG+ G GP G PG +GEP
Sbjct: 209 GVGQPGLPGAPGQGGAPG-PPGLPGPAG-LGKPGLDGLPGAPGDKGESGPPGVPGPRGEP 266
Query: 97 GRQGLPGPPGAPGLNAAGA 115
G G GPPG G+ GA
Sbjct: 267 GAVGPKGPPGVDGVGVPGA 285
Score = 60.5 bits (145), Expect = 1e-09
Identities = 35/78 (44%), Positives = 41/78 (52%), Gaps = 13/78 (16%)
Query: 45 ATPDRGLMQSLPTFIQGPKGEAGRPGKAGPRGPPGEPGP--------PGPMGPPGEKGEP 96
A D+G +S P + GP+GE PG GP+GPPG G PGP GP G KGEP
Sbjct: 247 APGDKG--ESGPPGVPGPRGE---PGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEP 301
Query: 97 GRQGLPGPPGAPGLNAAG 114
G +G PG G G G
Sbjct: 302 GTRGPPGLIGPTGYGMPG 319
Score = 58.9 bits (141), Expect = 4e-09
Identities = 38/81 (46%), Positives = 39/81 (48%), Gaps = 15/81 (18%)
Query: 34 PYGGTKAPSTAATPDRGLMQSLPTFIQGPKGEA--GRPGKAGPRGPPGEPGPPGPMGPPG 91
P G P T P GL+ GP G G PG G RGP G PG G G PG
Sbjct: 294 PSGAKGEPGTRGPP--GLI--------GPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPG 343
Query: 92 EKGEPGR---QGLPGPPGAPG 109
E GEPG QGL GPPG PG
Sbjct: 344 EDGEPGEQGPQGLGGPPGLPG 364
Score = 58.9 bits (141), Expect = 4e-09
Identities = 26/51 (50%), Positives = 32/51 (62%)
Query: 60 QGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGL 110
+G GE G PG+ GP+G G PG PG G PG +G PG +G GP G PG+
Sbjct: 339 RGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGV 389
Score = 57.8 bits (138), Expect = 9e-09
Identities = 31/70 (44%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 61 GPKGEAGRPGKAGPRGPPGEPGPPGP-----MGPPGEKGEPGRQGLPGPPGAPGLNAAGA 115
G KGE+G PG GPRG PG GP GP +G PG G PG QG G G PG
Sbjct: 249 GDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPG 308
Query: 116 ISAATYSTVP 125
+ T +P
Sbjct: 309 LIGPTGYGMP 318
Score = 57.0 bits (136), Expect = 2e-08
Identities = 29/61 (47%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 56 PTFIQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAAGA 115
P + G +G+ G G AG G PGE G PG GPPG G G G G PG PG+ AGA
Sbjct: 386 PPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGV--AGA 443
Query: 116 I 116
+
Sbjct: 444 L 444
Score = 55.8 bits (133), Expect = 3e-08
Identities = 30/66 (45%), Positives = 34/66 (51%), Gaps = 20/66 (30%)
Query: 64 GEAGRPGKAGPRGPPGEP---------------GPPGPMGPPGEK-----GEPGRQGLPG 103
G+AG PG G GPPG+P GPPGP G PG G+PG QG+PG
Sbjct: 123 GKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQGVPG 182
Query: 104 PPGAPG 109
PPG G
Sbjct: 183 PPGFQG 188
Score = 55.8 bits (133), Expect = 3e-08
Identities = 28/60 (46%), Positives = 32/60 (53%), Gaps = 9/60 (15%)
Query: 59 IQGPKGEAGRPGKAGPRGPPGEPGPPGPMGP---------PGEKGEPGRQGLPGPPGAPG 109
+ G +G G G+AGP GPPG PG G GP PGE+G PG G PGP G G
Sbjct: 368 LPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKG 427
Score = 53.5 bits (127), Expect = 2e-07
Identities = 31/74 (41%), Positives = 36/74 (48%), Gaps = 21/74 (28%)
Query: 56 PTFIQGPKGEAGRPGKAGPRGPP------GEPGPPGPMGPPGEK--------------GE 95
P + GP G PGK G +G P GEPGP G GPPG++ G
Sbjct: 160 PPGLPGPSGIT-IPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGA 218
Query: 96 PGRQGLPGPPGAPG 109
PG+ G PGPPG PG
Sbjct: 219 PGQGGAPGPPGLPG 232
Score = 53.5 bits (127), Expect = 2e-07
Identities = 31/64 (48%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 60 QGPKGEAGRPGKAGPRGPPG---EPGPPGPMGPPGEKGE---PGRQGLPGPPGAPGLNA- 112
+G G G PG GP+G PG PG PG G G+KG+ PG+ GL GP G PGL
Sbjct: 411 RGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGP 470
Query: 113 AGAI 116
AG I
Sbjct: 471 AGPI 474
Score = 52.8 bits (125), Expect = 3e-07
Identities = 29/57 (50%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Query: 61 GPKGEAGRPGKAGPRGPPGEPGP------PGPMGPPGEK--GEPGRQGLPGPPGAPG 109
G G G PG G GPPG PGP GP GPPG G PG GLPGP G G
Sbjct: 240 GLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSG 296
Score = 52.4 bits (124), Expect = 4e-07
Identities = 30/67 (44%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 48 DRGLMQSLPTFIQGPKGEAGRPGKAGPRGPP-----GEPGPPGPMGPPGEKGEPGRQGLP 102
DRGL G G G+ G GP G P G+PG G G PG+KGE G G+P
Sbjct: 201 DRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVP 260
Query: 103 GPPGAPG 109
GP G PG
Sbjct: 261 GPRGEPG 267
Score = 51.2 bits (121), Expect = 9e-07
Identities = 27/63 (42%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
Query: 56 PTFIQGPKGEAGRPGKAGPRGPPGEPGPP---------GPMGPPGEKGEPGRQGLPGPPG 106
P + G G GR G GP+G G GPP GP G G+ G PG +GLPG G
Sbjct: 359 PPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHG 418
Query: 107 APG 109
PG
Sbjct: 419 PPG 421
Score = 50.1 bits (118), Expect = 2e-06
Identities = 27/58 (46%), Positives = 28/58 (48%), Gaps = 9/58 (15%)
Query: 61 GPKGEAGRPGKAGPRGPPGEPGPPGPM---------GPPGEKGEPGRQGLPGPPGAPG 109
GP G G G GP G G+PG PG GP G KGEPG G PG PG G
Sbjct: 385 GPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAG 442
>gi|4757760 adiponectin precursor [Homo sapiens]
Length = 244
Score = 126 bits (316), Expect = 2e-29
Identities = 78/223 (34%), Positives = 114/223 (51%), Gaps = 35/223 (15%)
Query: 50 GLMQSLPTFIQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPG 109
G M +P G G GR G+ G G GE G PG +GP G+ GE G G GP G PG
Sbjct: 38 GWMAGIPGH-PGHNGAPGRDGRDGTPGEKGEKGDPGLIGPKGDIGETGVPGAEGPRGFPG 96
Query: 110 L--------------NAAGAISAATYSTVPKIAFYAGLKRQHEGYEVLKFDDVVTNLGNH 155
+ +A ++ TY T+P + ++F + N NH
Sbjct: 97 IQGRKGEPGEGAYVYRSAFSVGLETYVTIPNMP--------------IRFTKIFYNQQNH 142
Query: 156 YDPTTGKFTCSIPGIYFFTYHVLMRGGDGTSMWADLCKNNQVRASAIAQDADQNYDYASN 215
YD +TGKF C+IPG+Y+F YH+ + D + L K ++ Q + N D AS
Sbjct: 143 YDGSTGKFHCNIPGLYYFAYHITVYMKD---VKVSLFKKDKAMLFTYDQYQENNVDQASG 199
Query: 216 SVVLHLEPGDEVYIKLDG-GKAHG--GNNNKYSTFSGFIIYAD 255
SV+LHLE GD+V++++ G G+ +G +N+ STF+GF++Y D
Sbjct: 200 SVLLHLEVGDQVWLQVYGEGERNGLYADNDNDSTFTGFLLYHD 242
>gi|56847616 C1q and tumor necrosis factor related protein 9B [Homo
sapiens]
Length = 333
Score = 124 bits (311), Expect = 8e-29
Identities = 76/207 (36%), Positives = 107/207 (51%), Gaps = 19/207 (9%)
Query: 61 GPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNA-------A 113
GP G G G GP GP G PGP GP+G PG KGE G G G PG G+
Sbjct: 131 GPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEPGVRGIRGWKGDRGEK 190
Query: 114 GAISAATYSTVPKIAFYAG---LKRQHEGYEVLKFDDVVTNLGNHYDPTTGKFTCSIPGI 170
G I +PK AF G L + +KFD ++ N NHYD GKFTC I G+
Sbjct: 191 GKIGETL--VLPKSAFTVGLTVLSKFPSSDVPIKFDKILYNEFNHYDTAVGKFTCHIAGV 248
Query: 171 YFFTYHVLMRGGDGTSMWADLCKNNQVRASAIAQDADQNYDYASNSVVLHLEPGDEVYIK 230
Y+FTYH+ + ++ L KN V+ + D AS S+VL L+ GDE++++
Sbjct: 249 YYFTYHITV---FSRNVQVSLVKNG-VKILHTRDAYVSSEDQASGSIVLQLKLGDEMWLQ 304
Query: 231 LDGGKAHGG---NNNKYSTFSGFIIYA 254
+ GG+ G + + +TF+GF++++
Sbjct: 305 VTGGERFNGLFADEDDDTTFTGFLLFS 331
Score = 44.7 bits (104), Expect = 8e-05
Identities = 21/47 (44%), Positives = 23/47 (48%)
Query: 63 KGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPG 109
+G G PG G G PG G G G G+ GEPG G PG G G
Sbjct: 25 QGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGCPGSPGKDGTSG 71
Score = 44.7 bits (104), Expect = 8e-05
Identities = 22/50 (44%), Positives = 25/50 (50%)
Query: 61 GPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGL 110
G G GR G G +G GEPG PG G G GE G +G G A G+
Sbjct: 38 GLPGRDGRDGAKGDKGDAGEPGCPGSPGKDGTSGEKGERGADGKVEAKGI 87
Score = 43.1 bits (100), Expect = 2e-04
Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 60 QGPKGEAGRPG------KAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGL 110
+G KG+AG PG K G G GE G G + G KG+ G +G PG G GL
Sbjct: 49 KGDKGDAGEPGCPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGL 105
Score = 42.4 bits (98), Expect = 4e-04
Identities = 21/42 (50%), Positives = 23/42 (54%)
Query: 68 RPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPG 109
R G G G PG G PG G G KG+ G G PG PG+PG
Sbjct: 24 RQGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGCPGSPG 65
Score = 42.0 bits (97), Expect = 5e-04
Identities = 22/51 (43%), Positives = 23/51 (45%)
Query: 59 IQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPG 109
+ G G G G G G PG PG PG G GEKGE G G G G
Sbjct: 39 LPGRDGRDGAKGDKGDAGEPGCPGSPGKDGTSGEKGERGADGKVEAKGIKG 89
Score = 40.4 bits (93), Expect = 0.002
Identities = 21/51 (41%), Positives = 24/51 (47%)
Query: 59 IQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPG 109
I G G G PG+ G G G+ G G G PG G+ G G G GA G
Sbjct: 30 IPGNPGHNGLPGRDGRDGAKGDKGDAGEPGCPGSPGKDGTSGEKGERGADG 80
Score = 39.7 bits (91), Expect = 0.003
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 61 GPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGR---QGLPGPPGAPG 109
G G G G AG G PG PG G G GE+G G+ +G+ G G+ G
Sbjct: 44 GRDGAKGDKGDAGEPGCPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGSRG 95
>gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 124 bits (311), Expect = 8e-29
Identities = 83/244 (34%), Positives = 115/244 (47%), Gaps = 52/244 (21%)
Query: 59 IQGPKGEAGRPGKAGPRGPPGEPGPPG--------------PMGPPGEKGEPGRQGLPGP 104
I GP G G PG GP+G PG PGPPG P G PG G G+ GLPGP
Sbjct: 502 IGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQPGLPGP 561
Query: 105 PGAPGLNAAGAISAATYST----VPKIAF----------YAGLKRQHEG--YEV------ 142
PG PG A+ T +P + Y K ++ G YE+
Sbjct: 562 PGPPGPPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPPHAYGAKKGKNGGPAYEMPAFTAE 621
Query: 143 -----------LKFDDVVTNLGNHYDPTTGKFTCSIPGIYFFTYHVLMRGGDGTSMWADL 191
+KF+ ++ N +Y+P TG FTC +PG+Y+F YHV +GG ++W L
Sbjct: 622 LTAPFPPVGAPVKFNKLLYNGRQNYNPQTGIFTCEVPGVYYFAYHVHCKGG---NVWVAL 678
Query: 192 CKNNQVRASAIAQDADQNYDYASNSVVLHLEPGDEVYIKLDGGKAHGGNNNKY--STFSG 249
KNN+ + D AS S VL L PGD V++++ +A G +Y S+FSG
Sbjct: 679 FKNNEPVMYTYDEYKKGFLDQASGSAVLLLRPGDRVFLQMPSEQAAGLYAGQYVHSSFSG 738
Query: 250 FIIY 253
+++Y
Sbjct: 739 YLLY 742
Score = 73.6 bits (179), Expect = 2e-13
Identities = 34/57 (59%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 61 GPKGEAGRPGKAGPRGPPGEP---GPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAAG 114
GPKGE G PG G +GPPG P GP GP+GPPG G G GLPGPPG PG+ G
Sbjct: 480 GPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPG 536
Score = 67.8 bits (164), Expect = 9e-12
Identities = 35/60 (58%), Positives = 35/60 (58%), Gaps = 9/60 (15%)
Query: 59 IQGPKGEAGRPGKAGPRGPPGE---PGPPG------PMGPPGEKGEPGRQGLPGPPGAPG 109
I GP GE G PG GP GPPG PGP G P GPPG KGEPG QG PG PG G
Sbjct: 385 IGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLG 444
Score = 65.9 bits (159), Expect = 3e-11
Identities = 30/55 (54%), Positives = 36/55 (65%)
Query: 56 PTFIQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGL 110
P ++G G G G+AG +G PG PG PG +GP GE G PG QGL GPPG PG+
Sbjct: 448 PPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGI 502
Score = 65.5 bits (158), Expect = 4e-11
Identities = 33/72 (45%), Positives = 38/72 (52%), Gaps = 17/72 (23%)
Query: 60 QGPKGEAGRPGKAGPRGP-----------------PGEPGPPGPMGPPGEKGEPGRQGLP 102
QGP G+ G PG+ GP+GP PG+ G PG G PG KGE G GLP
Sbjct: 283 QGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLP 342
Query: 103 GPPGAPGLNAAG 114
GPPG PG+ G
Sbjct: 343 GPPGLPGIGKPG 354
Score = 65.1 bits (157), Expect = 6e-11
Identities = 38/74 (51%), Positives = 41/74 (55%), Gaps = 12/74 (16%)
Query: 48 DRGLMQSLPTFI--QGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEP--------- 96
DRG M +P + +G KG G PG GP G PG PG PGPMGPPG G P
Sbjct: 361 DRG-MGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIV 419
Query: 97 GRQGLPGPPGAPGL 110
G QG PGP G PGL
Sbjct: 420 GPQGPPGPKGEPGL 433
Score = 60.5 bits (145), Expect = 1e-09
Identities = 31/65 (47%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 56 PTFIQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQG------LPGPPGAPG 109
P + GP G G PG P G G PGP GP+G PG GEPG QG + GPPG PG
Sbjct: 256 PPGMHGPPGPVGLPGVGKP-GVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPG 314
Query: 110 LNAAG 114
+ G
Sbjct: 315 IGKPG 319
Score = 60.5 bits (145), Expect = 1e-09
Identities = 31/56 (55%), Positives = 36/56 (64%), Gaps = 9/56 (16%)
Query: 61 GPKGEAG------RPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGL 110
GPKGE G +PG G GPPG G PGP+GP KGE G++G+PG PG PGL
Sbjct: 426 GPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGP---KGEAGQKGVPGLPGVPGL 478
Score = 60.1 bits (144), Expect = 2e-09
Identities = 34/77 (44%), Positives = 42/77 (54%), Gaps = 10/77 (12%)
Query: 45 ATPDRGLMQSLPTFIQGPKGEAGRPGKAGPRGPPGEP--------GPPGPMGPPGEKGEP 96
A P +G L + ++G +G G PG GP GPPG P G PGP G PG G+P
Sbjct: 103 AVPKKGKEIPLAS-LRGEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPG-VGKP 160
Query: 97 GRQGLPGPPGAPGLNAA 113
G G+PG PGA G+ A
Sbjct: 161 GMPGMPGKPGAMGMPGA 177
Score = 58.9 bits (141), Expect = 4e-09
Identities = 31/56 (55%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 60 QGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAAGA 115
QGP G G PG P GP G PG PGP G G KG PG QGL GP G G GA
Sbjct: 196 QGPPGPHGLPGIGKPGGP-GLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGA 250
Score = 58.9 bits (141), Expect = 4e-09
Identities = 31/60 (51%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 53 QSLPTFIQGPKG--EAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGL 110
Q LP + GP G G+PG GP+G G G PG +GP GEKG G G+ GPPG PGL
Sbjct: 336 QGLPG-LPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGL 394
Score = 58.9 bits (141), Expect = 4e-09
Identities = 33/62 (53%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 61 GPKGEAGR---PGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGA---PGLNAAG 114
GPKG+ G PG GPRG G G PG GPPGE G PG G GPPGA PG G
Sbjct: 357 GPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEG 416
Query: 115 AI 116
I
Sbjct: 417 GI 418
Score = 56.6 bits (135), Expect = 2e-08
Identities = 32/68 (47%), Positives = 34/68 (50%), Gaps = 13/68 (19%)
Query: 59 IQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGE------------PGRQGLPGPPG 106
I+G G G PG P G PG PG PG MG PG KGE PG QG PGP G
Sbjct: 145 IKGKPGPQGYPGVGKP-GMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHG 203
Query: 107 APGLNAAG 114
PG+ G
Sbjct: 204 LPGIGKPG 211
Score = 55.1 bits (131), Expect = 6e-08
Identities = 32/70 (45%), Positives = 36/70 (51%), Gaps = 21/70 (30%)
Query: 60 QGPKGEA--------------GRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGP- 104
+GPKG G PG G +GPPG GPPGP+G PG G+PG G PGP
Sbjct: 225 RGPKGLPGPQGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVGLPG-VGKPGVTGFPGPQ 283
Query: 105 -----PGAPG 109
PGAPG
Sbjct: 284 GPLGKPGAPG 293
Score = 53.9 bits (128), Expect = 1e-07
Identities = 29/57 (50%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 61 GPKGEAGRPGKAGP---RGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAAG 114
GPKG+ G G GP RGP G+ G G G PG KG PG G PGP G PG+ G
Sbjct: 220 GPKGDRGPKGLPGPQGLRGPKGDKG-FGMPGAPGVKGPPGMHGPPGPVGLPGVGKPG 275
Score = 51.6 bits (122), Expect = 7e-07
Identities = 28/52 (53%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 61 GPKGEAGRPGKAGPRGPPGEPGP---PGPMGPPGEKGEPGRQGLPGPPGAPG 109
G G G PG G G GE GP PGP GPPG G PG G PG PG PG
Sbjct: 167 GKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPG-IGKPGGPGLPG 217
Score = 45.8 bits (107), Expect = 4e-05
Identities = 23/48 (47%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Query: 72 AGPRGPPGEPGPPGPMGPPGEKGEPGR-----QGLPGPPGAPGLNAAG 114
A RG G G PGP GPPG G PG +G PGP G PG+ G
Sbjct: 114 ASLRGEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPG 161
>gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 124 bits (311), Expect = 8e-29
Identities = 83/244 (34%), Positives = 115/244 (47%), Gaps = 52/244 (21%)
Query: 59 IQGPKGEAGRPGKAGPRGPPGEPGPPG--------------PMGPPGEKGEPGRQGLPGP 104
I GP G G PG GP+G PG PGPPG P G PG G G+ GLPGP
Sbjct: 502 IGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQPGLPGP 561
Query: 105 PGAPGLNAAGAISAATYST----VPKIAF----------YAGLKRQHEG--YEV------ 142
PG PG A+ T +P + Y K ++ G YE+
Sbjct: 562 PGPPGPPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPPHAYGAKKGKNGGPAYEMPAFTAE 621
Query: 143 -----------LKFDDVVTNLGNHYDPTTGKFTCSIPGIYFFTYHVLMRGGDGTSMWADL 191
+KF+ ++ N +Y+P TG FTC +PG+Y+F YHV +GG ++W L
Sbjct: 622 LTAPFPPVGAPVKFNKLLYNGRQNYNPQTGIFTCEVPGVYYFAYHVHCKGG---NVWVAL 678
Query: 192 CKNNQVRASAIAQDADQNYDYASNSVVLHLEPGDEVYIKLDGGKAHGGNNNKY--STFSG 249
KNN+ + D AS S VL L PGD V++++ +A G +Y S+FSG
Sbjct: 679 FKNNEPVMYTYDEYKKGFLDQASGSAVLLLRPGDRVFLQMPSEQAAGLYAGQYVHSSFSG 738
Query: 250 FIIY 253
+++Y
Sbjct: 739 YLLY 742
Score = 73.6 bits (179), Expect = 2e-13
Identities = 34/57 (59%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 61 GPKGEAGRPGKAGPRGPPGEP---GPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAAG 114
GPKGE G PG G +GPPG P GP GP+GPPG G G GLPGPPG PG+ G
Sbjct: 480 GPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPG 536
Score = 67.8 bits (164), Expect = 9e-12
Identities = 35/60 (58%), Positives = 35/60 (58%), Gaps = 9/60 (15%)
Query: 59 IQGPKGEAGRPGKAGPRGPPGE---PGPPG------PMGPPGEKGEPGRQGLPGPPGAPG 109
I GP GE G PG GP GPPG PGP G P GPPG KGEPG QG PG PG G
Sbjct: 385 IGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLG 444
Score = 65.9 bits (159), Expect = 3e-11
Identities = 30/55 (54%), Positives = 36/55 (65%)
Query: 56 PTFIQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGL 110
P ++G G G G+AG +G PG PG PG +GP GE G PG QGL GPPG PG+
Sbjct: 448 PPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGI 502
Score = 65.5 bits (158), Expect = 4e-11
Identities = 33/72 (45%), Positives = 38/72 (52%), Gaps = 17/72 (23%)
Query: 60 QGPKGEAGRPGKAGPRGP-----------------PGEPGPPGPMGPPGEKGEPGRQGLP 102
QGP G+ G PG+ GP+GP PG+ G PG G PG KGE G GLP
Sbjct: 283 QGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLP 342
Query: 103 GPPGAPGLNAAG 114
GPPG PG+ G
Sbjct: 343 GPPGLPGIGKPG 354
Score = 65.1 bits (157), Expect = 6e-11
Identities = 38/74 (51%), Positives = 41/74 (55%), Gaps = 12/74 (16%)
Query: 48 DRGLMQSLPTFI--QGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEP--------- 96
DRG M +P + +G KG G PG GP G PG PG PGPMGPPG G P
Sbjct: 361 DRG-MGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIV 419
Query: 97 GRQGLPGPPGAPGL 110
G QG PGP G PGL
Sbjct: 420 GPQGPPGPKGEPGL 433
Score = 60.5 bits (145), Expect = 1e-09
Identities = 31/65 (47%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 56 PTFIQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQG------LPGPPGAPG 109
P + GP G G PG P G G PGP GP+G PG GEPG QG + GPPG PG
Sbjct: 256 PPGMHGPPGPVGLPGVGKP-GVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPG 314
Query: 110 LNAAG 114
+ G
Sbjct: 315 IGKPG 319
Score = 60.5 bits (145), Expect = 1e-09
Identities = 31/56 (55%), Positives = 36/56 (64%), Gaps = 9/56 (16%)
Query: 61 GPKGEAG------RPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGL 110
GPKGE G +PG G GPPG G PGP+GP KGE G++G+PG PG PGL
Sbjct: 426 GPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGP---KGEAGQKGVPGLPGVPGL 478
Score = 60.1 bits (144), Expect = 2e-09
Identities = 34/77 (44%), Positives = 42/77 (54%), Gaps = 10/77 (12%)
Query: 45 ATPDRGLMQSLPTFIQGPKGEAGRPGKAGPRGPPGEP--------GPPGPMGPPGEKGEP 96
A P +G L + ++G +G G PG GP GPPG P G PGP G PG G+P
Sbjct: 103 AVPKKGKEIPLAS-LRGEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPG-VGKP 160
Query: 97 GRQGLPGPPGAPGLNAA 113
G G+PG PGA G+ A
Sbjct: 161 GMPGMPGKPGAMGMPGA 177
Score = 58.9 bits (141), Expect = 4e-09
Identities = 31/56 (55%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 60 QGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAAGA 115
QGP G G PG P GP G PG PGP G G KG PG QGL GP G G GA
Sbjct: 196 QGPPGPHGLPGIGKPGGP-GLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGA 250
Score = 58.9 bits (141), Expect = 4e-09
Identities = 31/60 (51%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 53 QSLPTFIQGPKG--EAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGL 110
Q LP + GP G G+PG GP+G G G PG +GP GEKG G G+ GPPG PGL
Sbjct: 336 QGLPG-LPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGL 394
Score = 58.9 bits (141), Expect = 4e-09
Identities = 33/62 (53%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 61 GPKGEAGR---PGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGA---PGLNAAG 114
GPKG+ G PG GPRG G G PG GPPGE G PG G GPPGA PG G
Sbjct: 357 GPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEG 416
Query: 115 AI 116
I
Sbjct: 417 GI 418
Score = 56.6 bits (135), Expect = 2e-08
Identities = 32/68 (47%), Positives = 34/68 (50%), Gaps = 13/68 (19%)
Query: 59 IQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGE------------PGRQGLPGPPG 106
I+G G G PG P G PG PG PG MG PG KGE PG QG PGP G
Sbjct: 145 IKGKPGPQGYPGVGKP-GMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHG 203
Query: 107 APGLNAAG 114
PG+ G
Sbjct: 204 LPGIGKPG 211
Score = 55.1 bits (131), Expect = 6e-08
Identities = 32/70 (45%), Positives = 36/70 (51%), Gaps = 21/70 (30%)
Query: 60 QGPKGEA--------------GRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGP- 104
+GPKG G PG G +GPPG GPPGP+G PG G+PG G PGP
Sbjct: 225 RGPKGLPGPQGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVGLPG-VGKPGVTGFPGPQ 283
Query: 105 -----PGAPG 109
PGAPG
Sbjct: 284 GPLGKPGAPG 293
Score = 53.9 bits (128), Expect = 1e-07
Identities = 29/57 (50%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 61 GPKGEAGRPGKAGP---RGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAAG 114
GPKG+ G G GP RGP G+ G G G PG KG PG G PGP G PG+ G
Sbjct: 220 GPKGDRGPKGLPGPQGLRGPKGDKG-FGMPGAPGVKGPPGMHGPPGPVGLPGVGKPG 275
Score = 51.6 bits (122), Expect = 7e-07
Identities = 28/52 (53%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 61 GPKGEAGRPGKAGPRGPPGEPGP---PGPMGPPGEKGEPGRQGLPGPPGAPG 109
G G G PG G G GE GP PGP GPPG G PG G PG PG PG
Sbjct: 167 GKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPG-IGKPGGPGLPG 217
Score = 45.8 bits (107), Expect = 4e-05
Identities = 23/48 (47%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Query: 72 AGPRGPPGEPGPPGPMGPPGEKGEPGR-----QGLPGPPGAPGLNAAG 114
A RG G G PGP GPPG G PG +G PGP G PG+ G
Sbjct: 114 ASLRGEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPG 161
>gi|65301115 C1q and tumor necrosis factor related protein 9 [Homo
sapiens]
Length = 333
Score = 124 bits (310), Expect = 1e-28
Identities = 76/207 (36%), Positives = 106/207 (51%), Gaps = 19/207 (9%)
Query: 61 GPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNA-------A 113
GP G G G GP GP G PGP GP+G PG KGE G G G PG G+
Sbjct: 131 GPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEPGVRGIRGWKGDRGEK 190
Query: 114 GAISAATYSTVPKIAFYAG---LKRQHEGYEVLKFDDVVTNLGNHYDPTTGKFTCSIPGI 170
G I +PK AF G L + +KFD ++ N NHYD GKFTC I G+
Sbjct: 191 GKIGETL--VLPKSAFTVGLTVLSKFPSSDMPIKFDKILYNEFNHYDTAAGKFTCHIAGV 248
Query: 171 YFFTYHVLMRGGDGTSMWADLCKNNQVRASAIAQDADQNYDYASNSVVLHLEPGDEVYIK 230
Y+FTYH+ + ++ L KN V+ + D AS +VL L+ GDEV+++
Sbjct: 249 YYFTYHITV---FSRNVQVSLVKNG-VKILHTKDAYMSSEDQASGGIVLQLKLGDEVWLQ 304
Query: 231 LDGGKAHGG---NNNKYSTFSGFIIYA 254
+ GG+ G + + +TF+GF++++
Sbjct: 305 VTGGERFNGLFADEDDDTTFTGFLLFS 331
Score = 47.8 bits (112), Expect = 9e-06
Identities = 22/47 (46%), Positives = 24/47 (51%)
Query: 63 KGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPG 109
+G G PG G G PG G G G G+ GEPGR G PG G G
Sbjct: 25 QGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPGKDGTSG 71
Score = 45.1 bits (105), Expect = 6e-05
Identities = 22/50 (44%), Positives = 25/50 (50%)
Query: 61 GPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGL 110
G G GR G G +G GEPG PG G G GE G +G G A G+
Sbjct: 38 GLPGRDGRDGAKGDKGDAGEPGRPGSPGKDGTSGEKGERGADGKVEAKGI 87
Score = 43.9 bits (102), Expect = 1e-04
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 60 QGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGE------KGEPGRQGLPGPPGAPGL 110
+G KG+AG PG+ G G G G G G G+ KG+ G +G PG G GL
Sbjct: 49 KGDKGDAGEPGRPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGL 105
Score = 43.5 bits (101), Expect = 2e-04
Identities = 22/51 (43%), Positives = 23/51 (45%)
Query: 59 IQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPG 109
+ G G G G G G PG PG PG G GEKGE G G G G
Sbjct: 39 LPGRDGRDGAKGDKGDAGEPGRPGSPGKDGTSGEKGERGADGKVEAKGIKG 89
Score = 42.7 bits (99), Expect = 3e-04
Identities = 21/42 (50%), Positives = 23/42 (54%)
Query: 68 RPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPG 109
R G G G PG G PG G G KG+ G G PG PG+PG
Sbjct: 24 RQGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPG 65
Score = 42.0 bits (97), Expect = 5e-04
Identities = 25/64 (39%), Positives = 26/64 (40%)
Query: 50 GLMQSLPTFIQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPG 109
G + S T QG G G PG G G G G G G GE G PG G G G G
Sbjct: 15 GNINSQDTCRQGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPGKDGTSGEKG 74
Query: 110 LNAA 113
A
Sbjct: 75 ERGA 78
Score = 40.8 bits (94), Expect = 0.001
Identities = 21/51 (41%), Positives = 24/51 (47%)
Query: 59 IQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPG 109
I G G G PG+ G G G+ G G G PG G+ G G G GA G
Sbjct: 30 IPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPGKDGTSGEKGERGADG 80
>gi|122937273 hypothetical protein LOC131149 [Homo sapiens]
Length = 477
Score = 114 bits (286), Expect = 6e-26
Identities = 75/206 (36%), Positives = 110/206 (53%), Gaps = 18/206 (8%)
Query: 61 GPKGEAGRPGKAGPRGPPG------EPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAAG 114
G +G++GR G G +G PG E GPPG +GP G KG+ G +G+ GP G G
Sbjct: 272 GMEGKSGRNGLPGAKGDPGIKGEKGELGPPGLLGPTGPKGDIGNKGVRGPTGKKGSRGFK 331
Query: 115 AISAATYSTVPKIAFYAGLKRQHEGYEV-LKFDDVVTNLGNHYDPTTGKFTCSIPGIYFF 173
S + VP+ AF AGL + + +KF+ ++ N +Y P TGKF CSIPG Y F
Sbjct: 332 G-SKGELARVPRSAFSAGLSKPFPPPNIPIKFEKILYNDQGNYSPVTGKFNCSIPGTYVF 390
Query: 174 TYHVLMRGGDG-TSMWADLCKNNQVRASAIAQDADQNYDYASNSVVLHLEPGDEVYIKLD 232
+YH+ +RG S+ A K + R + Q+ DQ AS V+L L GD+V++++
Sbjct: 391 SYHITVRGRPARISLVAQNKKQFKSRETLYGQEIDQ----ASLLVILKLSAGDQVWLEV- 445
Query: 233 GGKAHGG---NNNKYSTFSGFIIYAD 255
K G + S F+GF++Y +
Sbjct: 446 -SKDWNGVYVSAEDDSIFTGFLLYPE 470
Score = 58.9 bits (141), Expect = 4e-09
Identities = 36/83 (43%), Positives = 37/83 (44%), Gaps = 14/83 (16%)
Query: 28 CRMVCDPYGGTKA-PSTAATPDRGLMQSLPTFIQGPKGEAGRPGKAGPRGPPGEPGPPGP 86
C C P G K P P GPKGEAG G GP G G GP G
Sbjct: 101 CCDCCSPVPGQKGEPGETGQP-------------GPKGEAGNLGIPGPPGVVGPQGPRGY 147
Query: 87 MGPPGEKGEPGRQGLPGPPGAPG 109
G G KGE G QG+PG PG PG
Sbjct: 148 KGEKGLKGERGDQGVPGYPGKPG 170
Score = 53.1 bits (126), Expect = 2e-07
Identities = 25/50 (50%), Positives = 29/50 (58%)
Query: 60 QGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPG 109
+G KGE G G+ G +G PG PG PG G PG KG+ G GL G G G
Sbjct: 145 RGYKGEKGLKGERGDQGVPGYPGKPGAQGEPGPKGDKGNIGLGGVKGQKG 194
Score = 46.6 bits (109), Expect = 2e-05
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query: 60 QGPKGEAGRPGKAGPRGP------PGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPG 109
QGP+G G G G RG PG+PG G GP G+KG G G+ G G+ G
Sbjct: 142 QGPRGYKGEKGLKGERGDQGVPGYPGKPGAQGEPGPKGDKGNIGLGGVKGQKGSKG 197
Score = 38.9 bits (89), Expect = 0.004
Identities = 23/61 (37%), Positives = 26/61 (42%), Gaps = 12/61 (19%)
Query: 61 GPKGEAGRPGKAGPRGPPG------------EPGPPGPMGPPGEKGEPGRQGLPGPPGAP 108
GPKG+ G G G +G G E G G MG PG G PG +G G G
Sbjct: 176 GPKGDKGNIGLGGVKGQKGSKGDTCGNCTKGEKGDQGAMGSPGLHGGPGAKGEKGEMGEK 235
Query: 109 G 109
G
Sbjct: 236 G 236
Score = 37.7 bits (86), Expect = 0.010
Identities = 22/55 (40%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 61 GPKGEAGRPGKA------GPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPG 109
G KG+ G G G +G G G PG G PG KGE G G G G G
Sbjct: 188 GVKGQKGSKGDTCGNCTKGEKGDQGAMGSPGLHGGPGAKGEKGEMGEKGEMGDKG 242
>gi|56786155 complement component 1, q subcomponent, C chain
precursor [Homo sapiens]
Length = 245
Score = 113 bits (283), Expect = 1e-25
Identities = 83/269 (30%), Positives = 118/269 (43%), Gaps = 53/269 (19%)
Query: 2 VLLLVILIPVLVSSAGTSAHYEMLGTCRMVCDPYGGTKAPSTAATPDRGLMQSLPTFIQG 61
+LLL++L+P + G C YG P P + LP G
Sbjct: 15 LLLLLLLLP-------------LRGQANTGC--YGIPGMPGLPGAPGKDGYDGLP----G 55
Query: 62 PKGEAGRPGKAGPRGPPGEPGPP---------GPMGPPGEKGEPGRQGLPGPPGAPGLNA 112
PKGE G P G RGP G+ G P GPMGPPG G PG G+PG PG G
Sbjct: 56 PKGEPGIPAIPGIRGPKGQKGEPGLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEGRYK 115
Query: 113 AGAISAATYSTVPKIAFYAGLKRQHE---GYEVLKFDDVVTNLGNHYDPTTGKFTCSIPG 169
S T + ++ H+ +++F+ V+TN YD +TGKFTC +PG
Sbjct: 116 QKFQSVFTVT-----------RQTHQPPAPNSLIRFNAVLTNPQGDYDTSTGKFTCKVPG 164
Query: 170 IYFFTYHVLMRGGDGTSMWADLC---KNNQVRASAIAQDADQNYDYASNSVVLHLEPGDE 226
+Y+F YH S A+LC + V+ + S V+L L+ G+E
Sbjct: 165 LYYFVYH--------ASHTANLCVLLYRSGVKVVTFCGHTSKTNQVNSGGVLLRLQVGEE 216
Query: 227 VYIKLDGGKAHGGNNNKYSTFSGFIIYAD 255
V++ ++ G S FSGF+++ D
Sbjct: 217 VWLAVNDYYDMVGIQGSDSVFSGFLLFPD 245
>gi|166235903 complement component 1, q subcomponent, C chain
precursor [Homo sapiens]
Length = 245
Score = 113 bits (283), Expect = 1e-25
Identities = 83/269 (30%), Positives = 118/269 (43%), Gaps = 53/269 (19%)
Query: 2 VLLLVILIPVLVSSAGTSAHYEMLGTCRMVCDPYGGTKAPSTAATPDRGLMQSLPTFIQG 61
+LLL++L+P + G C YG P P + LP G
Sbjct: 15 LLLLLLLLP-------------LRGQANTGC--YGIPGMPGLPGAPGKDGYDGLP----G 55
Query: 62 PKGEAGRPGKAGPRGPPGEPGPP---------GPMGPPGEKGEPGRQGLPGPPGAPGLNA 112
PKGE G P G RGP G+ G P GPMGPPG G PG G+PG PG G
Sbjct: 56 PKGEPGIPAIPGIRGPKGQKGEPGLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEGRYK 115
Query: 113 AGAISAATYSTVPKIAFYAGLKRQHE---GYEVLKFDDVVTNLGNHYDPTTGKFTCSIPG 169
S T + ++ H+ +++F+ V+TN YD +TGKFTC +PG
Sbjct: 116 QKFQSVFTVT-----------RQTHQPPAPNSLIRFNAVLTNPQGDYDTSTGKFTCKVPG 164
Query: 170 IYFFTYHVLMRGGDGTSMWADLC---KNNQVRASAIAQDADQNYDYASNSVVLHLEPGDE 226
+Y+F YH S A+LC + V+ + S V+L L+ G+E
Sbjct: 165 LYYFVYH--------ASHTANLCVLLYRSGVKVVTFCGHTSKTNQVNSGGVLLRLQVGEE 216
Query: 227 VYIKLDGGKAHGGNNNKYSTFSGFIIYAD 255
V++ ++ G S FSGF+++ D
Sbjct: 217 VWLAVNDYYDMVGIQGSDSVFSGFLLFPD 245
>gi|14149712 C1q and tumor necrosis factor related protein 5
precursor [Homo sapiens]
Length = 243
Score = 112 bits (280), Expect = 3e-25
Identities = 76/215 (35%), Positives = 104/215 (48%), Gaps = 17/215 (7%)
Query: 55 LPTFIQGPKGEAGRPGKAGPRGPP---GEPGPPGPMGPPGEKGEPGRQGLPGPPGAPG-- 109
+P+ G G G PG G +G P G G G G PGEKGE GR GLPGP G PG
Sbjct: 24 IPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPR 83
Query: 110 --LNAAGAISAATYSTVPKIAFYAGLKRQHE----GYEVLKFDDVVTNLGNHYDPTTGKF 163
AG A +VP + ++ + + L FD V+ N HYD TGKF
Sbjct: 84 GEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKF 143
Query: 164 TCSIPGIYFFTYHVLMRGGDGTSMWADLCKNNQVRASAIAQDADQNYDYA-SNSVVLHLE 222
TC +PG+Y+F H + S+ DL KN + AS + S ++ LE
Sbjct: 144 TCQVPGVYYFAVHATVY---RASLQFDLVKNGESIASFFQFFGGWPKPASLSGGAMVRLE 200
Query: 223 PGDEVYIKLDGGKAHG--GNNNKYSTFSGFIIYAD 255
P D+V++++ G G + STFSGF++Y+D
Sbjct: 201 PEDQVWVQVGVGDYIGIYASIKTDSTFSGFLVYSD 235
>gi|7705753 complement component 1, q subcomponent, A chain
precursor [Homo sapiens]
Length = 245
Score = 110 bits (276), Expect = 9e-25
Identities = 77/220 (35%), Positives = 103/220 (46%), Gaps = 35/220 (15%)
Query: 61 GPKGEAGRPGKAGP---RGPPGEPGPP----------GPMGPPGEKGEPGRQGLPGPPGA 107
G KGEAGRPG+ G +G GEPG P G G PG G PG+ G PGP G
Sbjct: 31 GKKGEAGRPGRRGRPGLKGEQGEPGAPGIRTGIQGLKGDQGEPGPSGNPGKVGYPGPSGP 90
Query: 108 PGLNAAGAI-----SAATYSTVPKIAFYAGLKRQHEGYEVLKFDDVVTNLGNHYDPTTGK 162
G I S P+ AF A + G V+ FD V+TN Y +G+
Sbjct: 91 LGARGIPGIKGTKGSPGNIKDQPRPAFSAIRRNPPMGGNVVIFDTVITNQEEPYQNHSGR 150
Query: 163 FTCSIPGIYFFTYHVLMRGGDGTSMWADLC------KNNQVRASAIAQDADQN--YDYAS 214
F C++PG Y+FT+ VL S W ++C QVR S D + S
Sbjct: 151 FVCTVPGYYYFTFQVL-------SQW-EICLSIVSSSRGQVRRSLGFCDTTNKGLFQVVS 202
Query: 215 NSVVLHLEPGDEVYIKLDGGKAHGGNNNKY-STFSGFIIY 253
+VL L+ GD+V+++ D K H ++ S FSGF+I+
Sbjct: 203 GGMVLQLQQGDQVWVEKDPKKGHIYQGSEADSVFSGFLIF 242
>gi|13569919 C1q and tumor necrosis factor related protein 3 isoform
a [Homo sapiens]
Length = 246
Score = 109 bits (273), Expect = 2e-24
Identities = 68/199 (34%), Positives = 100/199 (50%), Gaps = 17/199 (8%)
Query: 56 PTFIQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPG-APGLNAAG 114
P I G G G G G G GE G G +GP GE+G+ G +G G PG P L A
Sbjct: 61 PPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYPGIPPELQIAF 120
Query: 115 AISAATYSTVPKIAFYAGLKRQHEGYEVLKFDDVVTNLGNHYDPTTGKFTCSIPGIYFFT 174
S AT+ Q+ G + F V TN+GN +D TG+F + G+YFFT
Sbjct: 121 MASLATH-----------FSNQNSG---IIFSSVETNIGNFFDVMTGRFGAPVSGVYFFT 166
Query: 175 YHVLMRGGDGTSMWADLCKNNQVRASAIAQDADQNYDYASNSVVLHLEPGDEVYIKLDGG 234
+ +M+ D ++ L N S + + D +SN VL L GDEV++++ G
Sbjct: 167 FS-MMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMGNG 225
Query: 235 KAHGGNNNKYSTFSGFIIY 253
H G++ ++STF+GF+++
Sbjct: 226 ALH-GDHQRFSTFAGFLLF 243
>gi|62739183 C1q and tumor necrosis factor related protein 3 isoform
b [Homo sapiens]
Length = 319
Score = 109 bits (273), Expect = 2e-24
Identities = 68/199 (34%), Positives = 100/199 (50%), Gaps = 17/199 (8%)
Query: 56 PTFIQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPG-APGLNAAG 114
P I G G G G G G GE G G +GP GE+G+ G +G G PG P L A
Sbjct: 134 PPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYPGIPPELQIAF 193
Query: 115 AISAATYSTVPKIAFYAGLKRQHEGYEVLKFDDVVTNLGNHYDPTTGKFTCSIPGIYFFT 174
S AT+ Q+ G + F V TN+GN +D TG+F + G+YFFT
Sbjct: 194 MASLATH-----------FSNQNSG---IIFSSVETNIGNFFDVMTGRFGAPVSGVYFFT 239
Query: 175 YHVLMRGGDGTSMWADLCKNNQVRASAIAQDADQNYDYASNSVVLHLEPGDEVYIKLDGG 234
+ +M+ D ++ L N S + + D +SN VL L GDEV++++ G
Sbjct: 240 FS-MMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMGNG 298
Query: 235 KAHGGNNNKYSTFSGFIIY 253
H G++ ++STF+GF+++
Sbjct: 299 ALH-GDHQRFSTFAGFLLF 316
>gi|5901944 elastin microfibril interfacer 1 [Homo sapiens]
Length = 1016
Score = 104 bits (259), Expect = 9e-23
Identities = 71/208 (34%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 63 KGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAAGAISAATYS 122
K G G+AGP GPPG GPPGP GPPG G+ G++G GPPG G + A +
Sbjct: 810 KDLTGPAGEAGPPGPPGLQGPPGPAGPPGSPGKDGQEGPIGPPGPQG---EQGVEGAPAA 866
Query: 123 TVPKIAFYAGLKRQHEGYEVLKFDDVVTNLGNHYDPTTGKFTCSIPGIYFFTYHVLMRGG 182
VP++AF A L + FD V+ N G +YDP TG FT + G Y + ++ G
Sbjct: 867 PVPQVAFSAALSLPRSEPGTVPFDRVLLNDGGYYDPETGVFTAPLAGRYLLS--AVLTGH 924
Query: 183 DGTSMWADLCKNNQ----VRASAIAQDADQNYDYASN----------SVVLHLEPGDEVY 228
+ A L ++NQ V + + +N A + S++L L+ GD V
Sbjct: 925 RHEKVEAVLSRSNQGVARVDSGGYEPEGLENKPVAESQPSPGTLGVFSLILPLQAGDTVC 984
Query: 229 IKLDGGK-AHGGNNNKYSTFSGFIIYAD 255
+ L G+ AH + + FSG ++Y D
Sbjct: 985 VDLVMGQLAH--SEEPLTIFSGALLYGD 1010
>gi|32967300 C1q and tumor necrosis factor related protein 6 [Homo
sapiens]
Length = 278
Score = 86.3 bits (212), Expect = 2e-17
Identities = 68/237 (28%), Positives = 102/237 (43%), Gaps = 25/237 (10%)
Query: 28 CRMVCDPYGGTKAPSTAATPDRGLMQSLPTF-----IQGPKGEAGRPGKAGPRGPPGEPG 82
C+ CD ++ G +LP I KG+ G PG G G G G
Sbjct: 56 CQRCCDSEDPLDPAHVSSASSSGRPHALPEIRPYINITILKGDKGDPGPMGLPGYMGREG 115
Query: 83 PPGPMGPPGEKGEPGRQGLPGPPGAPGLNAAGAISAATYSTVPKIAFYAGLKRQHEGYEV 142
P G GP G KG+ G G PG P A +S K A ++G E ++
Sbjct: 116 PQGEPGPQGSKGDKGEMGSPGAPCQKRFFA--------FSVGRKTALHSG-----EDFQT 162
Query: 143 LKFDDVVTNLGNHYDPTTGKFTCSIPGIYFFTYHVLMRGGDGTSMWADLCKNNQVRASAI 202
L F+ V NL +D TG+F + GIYFF+ +V + + + N +
Sbjct: 163 LLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNV--HSWNYKETYVHIMHNQKEAVILY 220
Query: 203 AQDADQNYDYASNSVVLHLEPGDEVYIKL----DGGKAHGGNNNKYSTFSGFIIYAD 255
AQ ++++ S SV+L L GD V+++L + + + Y TFSG +I A+
Sbjct: 221 AQPSERSI-MQSQSVMLDLAYGDRVWVRLFKRQRENAIYSNDFDTYITFSGHLIKAE 276
>gi|32967294 C1q and tumor necrosis factor related protein 6 [Homo
sapiens]
Length = 278
Score = 86.3 bits (212), Expect = 2e-17
Identities = 68/237 (28%), Positives = 102/237 (43%), Gaps = 25/237 (10%)
Query: 28 CRMVCDPYGGTKAPSTAATPDRGLMQSLPTF-----IQGPKGEAGRPGKAGPRGPPGEPG 82
C+ CD ++ G +LP I KG+ G PG G G G G
Sbjct: 56 CQRCCDSEDPLDPAHVSSASSSGRPHALPEIRPYINITILKGDKGDPGPMGLPGYMGREG 115
Query: 83 PPGPMGPPGEKGEPGRQGLPGPPGAPGLNAAGAISAATYSTVPKIAFYAGLKRQHEGYEV 142
P G GP G KG+ G G PG P A +S K A ++G E ++
Sbjct: 116 PQGEPGPQGSKGDKGEMGSPGAPCQKRFFA--------FSVGRKTALHSG-----EDFQT 162
Query: 143 LKFDDVVTNLGNHYDPTTGKFTCSIPGIYFFTYHVLMRGGDGTSMWADLCKNNQVRASAI 202
L F+ V NL +D TG+F + GIYFF+ +V + + + N +
Sbjct: 163 LLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNV--HSWNYKETYVHIMHNQKEAVILY 220
Query: 203 AQDADQNYDYASNSVVLHLEPGDEVYIKL----DGGKAHGGNNNKYSTFSGFIIYAD 255
AQ ++++ S SV+L L GD V+++L + + + Y TFSG +I A+
Sbjct: 221 AQPSERSI-MQSQSVMLDLAYGDRVWVRLFKRQRENAIYSNDFDTYITFSGHLIKAE 276
>gi|38372917 C1q and tumor necrosis factor related protein 1 isoform
1 [Homo sapiens]
Length = 281
Score = 85.5 bits (210), Expect = 4e-17
Identities = 67/232 (28%), Positives = 101/232 (43%), Gaps = 36/232 (15%)
Query: 28 CRMVCDPYGGTKAPSTAATPDRGLMQSLPTFIQGPKGEAGRPGKAGPRGPPGEPGPPGPM 87
C CDP GT A P + T ++G KG+ G G G G G G G
Sbjct: 73 CLRCCDP--GTSMYPATAVPQINI-----TILKGEKGDRGDRGLQGKYGKTGSAGARGHT 125
Query: 88 GPPGEKGEPGRQGLPGPPGAPGLNAAGAISAATYSTVPKIAFYAGLKR---QHEGYEVLK 144
GP G+KG G APG +A F G K+ + Y+ +
Sbjct: 126 GPKGQKGSMG---------APGERCKSHYAA----------FSVGRKKPMHSNHYYQTVI 166
Query: 145 FDDVVTNLGNHYDPTTGKFTCSIPGIYFFTYHVLMRGGDGTSMWADLCKNNQVRASAIAQ 204
FD NL +H++ TGKF C +PG+YFF+ +V + + + KN + AQ
Sbjct: 167 FDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNV--HTWNQKETYLHIMKNEEEVVILFAQ 224
Query: 205 DADQNYDYASNSVVLHLEPGDEVYIKLDGGKAHGG----NNNKYSTFSGFII 252
D++ S S++L L D+V+++L G+ + Y TFSG+++
Sbjct: 225 VGDRSI-MQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLV 275
>gi|13569944 C1q and tumor necrosis factor related protein 1 isoform
1 [Homo sapiens]
Length = 281
Score = 85.5 bits (210), Expect = 4e-17
Identities = 67/232 (28%), Positives = 101/232 (43%), Gaps = 36/232 (15%)
Query: 28 CRMVCDPYGGTKAPSTAATPDRGLMQSLPTFIQGPKGEAGRPGKAGPRGPPGEPGPPGPM 87
C CDP GT A P + T ++G KG+ G G G G G G G
Sbjct: 73 CLRCCDP--GTSMYPATAVPQINI-----TILKGEKGDRGDRGLQGKYGKTGSAGARGHT 125
Query: 88 GPPGEKGEPGRQGLPGPPGAPGLNAAGAISAATYSTVPKIAFYAGLKR---QHEGYEVLK 144
GP G+KG G APG +A F G K+ + Y+ +
Sbjct: 126 GPKGQKGSMG---------APGERCKSHYAA----------FSVGRKKPMHSNHYYQTVI 166
Query: 145 FDDVVTNLGNHYDPTTGKFTCSIPGIYFFTYHVLMRGGDGTSMWADLCKNNQVRASAIAQ 204
FD NL +H++ TGKF C +PG+YFF+ +V + + + KN + AQ
Sbjct: 167 FDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNV--HTWNQKETYLHIMKNEEEVVILFAQ 224
Query: 205 DADQNYDYASNSVVLHLEPGDEVYIKLDGGKAHGG----NNNKYSTFSGFII 252
D++ S S++L L D+V+++L G+ + Y TFSG+++
Sbjct: 225 VGDRSI-MQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLV 275
>gi|116686136 C1q and tumor necrosis factor related protein 8 [Homo
sapiens]
Length = 252
Score = 83.6 bits (205), Expect = 2e-16
Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 27/212 (12%)
Query: 49 RGLMQSLPTF----IQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGP 104
RGL + PT ++G KGEAG G+AG G G PG G G G+KG+ GP
Sbjct: 54 RGLPRVRPTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQV------GP 107
Query: 105 PGAPGLNAAGAISAATYSTVPKIAFYAGLKRQHEGYEVLKFDDVVTNLGNHYDPTTGKFT 164
PGA A A S + + ++ + FD + NL +D G+F
Sbjct: 108 PGAACRRAYAAFSVGRREGL----------HSSDHFQAVPFDTELVNLDGAFDLAAGRFL 157
Query: 165 CSIPGIYFFTYHVLMRGGDGTSMWADLCKNNQVRASAIAQDADQNYDYASNSVVLHLEPG 224
C++PG+YF + +V + + + N + A AQ ++++ A S++L L G
Sbjct: 158 CTVPGVYFLSLNV--HTWNYKETYLHIMLNRRPAAVLYAQPSERSVMQA-QSLMLLLAAG 214
Query: 225 DEVYIKL---DGGKA-HGGNNNKYSTFSGFII 252
D V++++ D A +G + + Y TFSG ++
Sbjct: 215 DAVWVRMFQRDRDNAIYGEHGDLYITFSGHLV 246
>gi|50428933 C1q domain containing 1 isoform 1 [Homo sapiens]
Length = 1127
Score = 82.8 bits (203), Expect = 3e-16
Identities = 41/111 (36%), Positives = 68/111 (61%), Gaps = 2/111 (1%)
Query: 145 FDDVVTNLGNHYDPTTGKFTCSIPGIYFFTYHVLMRGGDGTSMWADLCKNNQVRASAIAQ 204
FD ++ NLG +D G+F C + G Y F +H+L + ++ +L KN +V SA A
Sbjct: 1019 FDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVN-VPLYVNLMKNEEVLVSAYAN 1077
Query: 205 DADQNYDYASNSVVLHLEPGDEVYIKLDGGKAHGGNNNKYSTFSGFIIYAD 255
D +++ ASN +L L GD+++++L G + G++ KYSTFSG+++Y D
Sbjct: 1078 DGAPDHETASNHAILQLFQGDQIWLRLHRGAIY-GSSWKYSTFSGYLLYQD 1127
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.138 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,837,408
Number of Sequences: 37866
Number of extensions: 939288
Number of successful extensions: 36775
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 711
Number of HSP's that attempted gapping in prelim test: 6492
Number of HSP's gapped (non-prelim): 12676
length of query: 255
length of database: 18,247,518
effective HSP length: 100
effective length of query: 155
effective length of database: 14,460,918
effective search space: 2241442290
effective search space used: 2241442290
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.