Guide to the Human Genome
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Name: FAM22D Sequence: fasta or formatted (557aa) NCBI GI: 57528101
Description:

hypothetical protein LOC728130

Referenced in:

Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         53           3
 C cysteine            2.2         12           1
 D aspartate           2.7         15           2
 E glutamate           7.7         43           3
 F phenylalanine       3.2         18           1
 G glycine             8.3         46           2
 H histidine           1.6          9           1
 I isoleucine          1.4          8           1
 K lysine              3.2         18           1
 L leucine             9.5         53           3
 M methionine          2.2         12           1
 N asparagine          1.6          9           1
 P proline            15.3         85           6
 Q glutamine           6.8         38           1
 R arginine            4.5         25           2
 S serine              5.6         31           2
 T threonine           5.4         30           2
 V valine              6.5         36           2
 W tryptophan          1.4          8           1
 Y tyrosine            1.4          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC728130 
FAM22E                0.962   PREDICTED: hypothetical protein isoform 1 
FAM22A                0.952   hypothetical protein LOC728118 
FAM22B                0.944   PREDICTED: hypothetical protein isoform 1 
FAM22E                0.938   PREDICTED: hypothetical protein 
FAM22F                0.762   hypothetical protein LOC54754 
FAM22G                0.761   hypothetical protein LOC441457 
C15orf55              0.364   nuclear protein in testis 
BRD4                  0.027   bromodomain-containing protein 4 isoform long 
SAMD1                 0.025   sterile alpha motif domain containing 1 
TTN                   0.024   titin isoform N2-A 
MLL4                  0.024   myeloid/lymphoid or mixed-lineage leukemia 4 
PRG4                  0.022   proteoglycan 4 isoform D 
PRG4                  0.022   proteoglycan 4 isoform C 
PRG4                  0.022   proteoglycan 4 isoform B 
PRG4                  0.022   proteoglycan 4 isoform A 
RAPH1                 0.022   Ras association and pleckstrin homology domains 1 is...
WASL                  0.022   Wiskott-Aldrich syndrome gene-like protein 
WIPF2                 0.021   WIRE protein 
TNK2                  0.021   tyrosine kinase, non-receptor, 2 isoform 2 
PRR12                 0.020   proline rich 12 
PELP1                 0.019   proline, glutamic acid and leucine rich protein 1 [...
LOC100292723          0.019   PREDICTED: hypothetical protein 
LOC100291797          0.019   PREDICTED: hypothetical protein XP_002345651 
LOC100291443          0.019   PREDICTED: hypothetical protein XP_002346504 
LOC100289394          0.019   PREDICTED: hypothetical protein XP_002342316 
IQSEC2                0.019   IQ motif and Sec7 domain 2 isoform1 
PRRT1                 0.018   NG5 protein 
CCNK                  0.018   cyclin K isoform 1 
ZC3H18                0.018   zinc finger CCCH-type containing 18 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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